RNA–Protein interactions for RNA: ENST00000491382.1

PFDN6-207, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-207ENST00000491382 RIC3Q7Z5B4 369 aa20.61■□□□□ 0.89
PFDN6-207ENST00000491382 NLRP10Q86W26 655 aa20.61■□□□□ 0.89
PFDN6-207ENST00000491382 PHAXQ9H814 394 aaKnown RBP20.61■□□□□ 0.89
PFDN6-207ENST00000491382 SLX4Q8IY92 1834 aa20.6■□□□□ 0.89
PFDN6-207ENST00000491382 ADCY9O60503 1353 aa20.59■□□□□ 0.89
PFDN6-207ENST00000491382 ZNF521Q96K83 1311 aa20.59■□□□□ 0.89
PFDN6-207ENST00000491382 EXOSC9Q06265 439 aaKnown RBP20.59■□□□□ 0.89
PFDN6-207ENST00000491382 SOGA3Q5TF21 947 aa20.59■□□□□ 0.89
PFDN6-207ENST00000491382 PRPF40BQ6NWY9 871 aaKnown RBP20.59■□□□□ 0.89
PFDN6-207ENST00000491382 SBF1O95248 1867 aa20.58■□□□□ 0.89
PFDN6-207ENST00000491382 ALDH1B1P30837 517 aa20.58■□□□□ 0.89
PFDN6-207ENST00000491382 CRY2Q49AN0 593 aa20.58■□□□□ 0.89
PFDN6-207ENST00000491382 RPGRQ92834 1020 aaKnown RBP20.58■□□□□ 0.89
PFDN6-207ENST00000491382 SPINK5Q9NQ38 1064 aaPredicted RBP20.58■□□□□ 0.89
PFDN6-207ENST00000491382 TRMT112Q9UI30 125 aaKnown RBP20.58■□□□□ 0.89
PFDN6-207ENST00000491382 SH3TC1Q8TE82 1336 aa20.57■□□□□ 0.88
PFDN6-207ENST00000491382 C21orf2O43822 256 aa20.57■□□□□ 0.88
PFDN6-207ENST00000491382 FER1L6Q2WGJ9 1857 aa20.57■□□□□ 0.88
PFDN6-207ENST00000491382 NLRP3Q96P20 1036 aa20.57■□□□□ 0.88
PFDN6-207ENST00000491382 ISCA1Q9BUE6 129 aa20.57■□□□□ 0.88
PFDN6-207ENST00000491382 SLC4A2P04920 1241 aa20.56■□□□□ 0.88
PFDN6-207ENST00000491382 SLC10A5Q5PT55 438 aa20.56■□□□□ 0.88
PFDN6-207ENST00000491382 ZNF219Q9P2Y4 722 aaPredicted RBP20.56■□□□□ 0.88
PFDN6-207ENST00000491382 LAMB2P55268 1798 aa20.55■□□□□ 0.88
PFDN6-207ENST00000491382 ATP5J2-PTCD1G3V325 749 aa20.55■□□□□ 0.88
PFDN6-207ENST00000491382 TCERG1O14776 1098 aaKnown RBP20.55■□□□□ 0.88
PFDN6-207ENST00000491382 VAMP4O75379 141 aa20.55■□□□□ 0.88
PFDN6-207ENST00000491382 C9orf131Q5VYM1 1079 aa20.55■□□□□ 0.88
PFDN6-207ENST00000491382 CCDC88AQ3V6T2 1871 aa20.54■□□□□ 0.88
PFDN6-207ENST00000491382 E9PSI1 815 aa20.54■□□□□ 0.88
PFDN6-207ENST00000491382 TRIM28Q13263 835 aaKnown RBP20.54■□□□□ 0.88
PFDN6-207ENST00000491382 MIER1Q8N108 512 aa20.54■□□□□ 0.88
PFDN6-207ENST00000491382 RNF181Q9P0P0 153 aa20.54■□□□□ 0.88
PFDN6-207ENST00000491382 DDX60Q8IY21 1712 aaKnown RBP20.53■□□□□ 0.88
PFDN6-207ENST00000491382 LMNB1P20700 586 aa20.53■□□□□ 0.88
PFDN6-207ENST00000491382 HOXA10P31260 410 aaPredicted RBP20.53■□□□□ 0.88
PFDN6-207ENST00000491382 RASSF7Q02833 373 aa20.53■□□□□ 0.88
PFDN6-207ENST00000491382 KSR2Q6VAB6 950 aa20.53■□□□□ 0.88
PFDN6-207ENST00000491382 RBM17Q96I25 401 aaKnown RBP20.53■□□□□ 0.88
PFDN6-207ENST00000491382 MYD88Q99836 296 aa20.53■□□□□ 0.88
PFDN6-207ENST00000491382 METTL22Q9BUU2 404 aaPredicted RBP20.53■□□□□ 0.88
PFDN6-207ENST00000491382 CCDC93Q567U6 631 aa20.52■□□□□ 0.88
PFDN6-207ENST00000491382 MAP3K2Q9Y2U5 619 aa20.52■□□□□ 0.88
PFDN6-207ENST00000491382 TIAM2Q8IVF5 1701 aa20.51■□□□□ 0.87
PFDN6-207ENST00000491382 PI4KAP2A4QPH2 592 aa20.51■□□□□ 0.87
PFDN6-207ENST00000491382 NFKBIEO00221 500 aa20.51■□□□□ 0.87
PFDN6-207ENST00000491382 NEXNQ0ZGT2 675 aa20.51■□□□□ 0.87
PFDN6-207ENST00000491382 FLIIQ13045 1269 aa20.51■□□□□ 0.87
PFDN6-207ENST00000491382 PI4KAP1Q8N8J0 262 aa20.51■□□□□ 0.87
PFDN6-207ENST00000491382 CCDC191Q8NCU4 936 aa20.51■□□□□ 0.87
PFDN6-207ENST00000491382 CRAMP1Q96RY5 1269 aa20.51■□□□□ 0.87
PFDN6-207ENST00000491382 TAOK3Q9H2K8 898 aa20.51■□□□□ 0.87
PFDN6-207ENST00000491382 GPBP1L1Q9HC44 474 aaPredicted RBP20.51■□□□□ 0.87
PFDN6-207ENST00000491382 LTBP3Q9NS15 1303 aa20.51■□□□□ 0.87
PFDN6-207ENST00000491382 HCLS1P14317 486 aaPredicted RBP20.5■□□□□ 0.87
PFDN6-207ENST00000491382 HSP90B1P14625 803 aaKnown RBP20.5■□□□□ 0.87
PFDN6-207ENST00000491382 C7orf43Q8WVR3 580 aa20.5■□□□□ 0.87
PFDN6-207ENST00000491382 FAM89AQ96GI7 184 aa20.5■□□□□ 0.87
PFDN6-207ENST00000491382 DICER1Q9UPY3 1922 aaKnown RBP20.5■□□□□ 0.87
PFDN6-207ENST00000491382 ZC3H4Q9UPT8 1303 aaKnown RBP20.5■□□□□ 0.87
PFDN6-207ENST00000491382 FKBP5Q13451 457 aaPredicted RBP20.49■□□□□ 0.87
PFDN6-207ENST00000491382 C3orf67Q6ZVT6 689 aa20.49■□□□□ 0.87
PFDN6-207ENST00000491382 G2E3Q7L622 706 aa20.49■□□□□ 0.87
PFDN6-207ENST00000491382 SYNE4Q8N205 404 aa20.49■□□□□ 0.87
PFDN6-207ENST00000491382 ZNF526Q8TF50 670 aaPredicted RBP20.49■□□□□ 0.87
PFDN6-207ENST00000491382 ZNF428Q96B54 188 aa20.49■□□□□ 0.87
PFDN6-207ENST00000491382 CWC25Q9NXE8 425 aaPredicted RBP20.49■□□□□ 0.87
PFDN6-207ENST00000491382 CC2D2BQ6DHV5 1058 aa20.48■□□□□ 0.87
PFDN6-207ENST00000491382 RTKN2Q8IZC4 609 aa20.48■□□□□ 0.87
PFDN6-207ENST00000491382 ZBTB38Q8NAP3 1195 aaPredicted RBP20.48■□□□□ 0.87
PFDN6-207ENST00000491382 SLFN5Q08AF3 891 aa20.47■□□□□ 0.87
PFDN6-207ENST00000491382 RTL5Q5HYW3 569 aaPredicted RBP20.47■□□□□ 0.87
PFDN6-207ENST00000491382 DDX46Q7L014 1031 aaKnown RBP20.47■□□□□ 0.87
PFDN6-207ENST00000491382 TMX4Q9H1E5 349 aaPredicted RBP20.47■□□□□ 0.87
PFDN6-207ENST00000491382 IRS4O14654 1257 aaPredicted RBP20.46■□□□□ 0.87
PFDN6-207ENST00000491382 PPEF1O14829 653 aaPredicted RBP20.46■□□□□ 0.87
PFDN6-207ENST00000491382 GRIPAP1Q4V328 841 aa20.46■□□□□ 0.87
PFDN6-207ENST00000491382 PCCAP05165 728 aaPredicted RBP20.45■□□□□ 0.86
PFDN6-207ENST00000491382 FKBP4Q02790 459 aaKnown RBP eCLIP20.45■□□□□ 0.86
PFDN6-207ENST00000491382 ABCC4O15439 1325 aa20.45■□□□□ 0.86
PFDN6-207ENST00000491382 KDM2BQ8NHM5 1336 aa20.45■□□□□ 0.86
PFDN6-207ENST00000491382 PRELPP51888 382 aa20.44■□□□□ 0.86
PFDN6-207ENST00000491382 DNAAF4Q8WXU2 420 aa20.44■□□□□ 0.86
PFDN6-207ENST00000491382 BBOX1O75936 387 aa20.43■□□□□ 0.86
PFDN6-207ENST00000491382 IGKV5-2P06315 115 aa20.43■□□□□ 0.86
PFDN6-207ENST00000491382 SF3B3Q15393 1217 aaKnown RBP20.43■□□□□ 0.86
PFDN6-207ENST00000491382 OLFM4Q6UX06 510 aa20.43■□□□□ 0.86
PFDN6-207ENST00000491382 NEURL1BA8MQ27 555 aa20.42■□□□□ 0.86
PFDN6-207ENST00000491382 GRAPQ13588 217 aa20.42■□□□□ 0.86
PFDN6-207ENST00000491382 CWF19L2Q2TBE0 894 aaKnown RBP20.42■□□□□ 0.86
PFDN6-207ENST00000491382 GRAPLQ8TC17 118 aaPredicted RBP20.42■□□□□ 0.86
PFDN6-207ENST00000491382 CDCA7LQ96GN5 454 aa20.42■□□□□ 0.86
PFDN6-207ENST00000491382 PSMD1Q99460 953 aa20.42■□□□□ 0.86
PFDN6-207ENST00000491382 MYH3P11055 1940 aa20.42■□□□□ 0.86
PFDN6-207ENST00000491382 CDHR2Q9BYE9 1310 aa20.42■□□□□ 0.86
PFDN6-207ENST00000491382 TAF1P21675 1872 aa20.41■□□□□ 0.86
PFDN6-207ENST00000491382 PDE8AO60658 829 aa20.41■□□□□ 0.86
PFDN6-207ENST00000491382 TMC4Q7Z404 712 aa20.41■□□□□ 0.86
PFDN6-207ENST00000491382 LINS1Q8NG48 757 aa20.41■□□□□ 0.86
PFDN6-207ENST00000491382 ATP6V0A2Q9Y487 856 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms