RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 FMR1Q06787 632 aaKnown RBP eCLIP18.25■□□□□ 0.51
CTDSP1-210ENST00000491064 CC2D2BQ6DHV5 1058 aa18.25■□□□□ 0.51
CTDSP1-210ENST00000491064 CAPNS2Q96L46 248 aa18.25■□□□□ 0.51
CTDSP1-210ENST00000491064 EPS15P42566 896 aa18.24■□□□□ 0.51
CTDSP1-210ENST00000491064 NUTM1Q86Y26 1132 aa18.24■□□□□ 0.51
CTDSP1-210ENST00000491064 ECE1P42892 770 aa18.23■□□□□ 0.51
CTDSP1-210ENST00000491064 DCTN1Q14203 1278 aa18.23■□□□□ 0.51
CTDSP1-210ENST00000491064 NYXQ9GZU5 481 aa18.23■□□□□ 0.51
CTDSP1-210ENST00000491064 HOXA10P31260 410 aaPredicted RBP18.22■□□□□ 0.51
CTDSP1-210ENST00000491064 CYP4F22Q6NT55 531 aa18.22■□□□□ 0.51
CTDSP1-210ENST00000491064 PAXIP1Q6ZW49 1069 aaPredicted RBP18.22■□□□□ 0.51
CTDSP1-210ENST00000491064 CFAP53Q96M91 514 aa18.22■□□□□ 0.51
CTDSP1-210ENST00000491064 RIC1Q4ADV7 1423 aa18.22■□□□□ 0.51
CTDSP1-210ENST00000491064 CST9Q5W186 159 aa18.21■□□□□ 0.51
CTDSP1-210ENST00000491064 USP50Q70EL3 339 aaPredicted RBP18.21■□□□□ 0.51
CTDSP1-210ENST00000491064 SLC51AQ86UW1 340 aa18.21■□□□□ 0.51
CTDSP1-210ENST00000491064 LARGE2Q8N3Y3 721 aa18.21■□□□□ 0.51
CTDSP1-210ENST00000491064 RPGRQ92834 1020 aaKnown RBP18.21■□□□□ 0.51
CTDSP1-210ENST00000491064 GPR101Q96P66 508 aaPredicted RBP18.21■□□□□ 0.51
CTDSP1-210ENST00000491064 BEGAINQ9BUH8 593 aa18.21■□□□□ 0.51
CTDSP1-210ENST00000491064 ERVV-1B6SEH8 477 aa18.2■□□□□ 0.5
CTDSP1-210ENST00000491064 TRAF5O00463 557 aa18.2■□□□□ 0.5
CTDSP1-210ENST00000491064 HTATSF1O43719 755 aaKnown RBP18.2■□□□□ 0.5
CTDSP1-210ENST00000491064 GRM1Q13255 1194 aa18.2■□□□□ 0.5
CTDSP1-210ENST00000491064 GRIPAP1Q4V328 841 aa18.2■□□□□ 0.5
CTDSP1-210ENST00000491064 NUDCQ9Y266 331 aa18.2■□□□□ 0.5
CTDSP1-210ENST00000491064 TLL2Q9Y6L7 1015 aa18.2■□□□□ 0.5
CTDSP1-210ENST00000491064 IBTKQ9P2D0 1353 aaPredicted RBP18.19■□□□□ 0.5
CTDSP1-210ENST00000491064 CCDC85CA6NKD9 419 aa18.19■□□□□ 0.5
CTDSP1-210ENST00000491064 U2AF1L5P0DN76 240 aaPredicted RBP18.19■□□□□ 0.5
CTDSP1-210ENST00000491064 U2AF1Q01081 240 aaKnown RBP eCLIP18.19■□□□□ 0.5
CTDSP1-210ENST00000491064 TAF7Q15545 349 aaPredicted RBP18.19■□□□□ 0.5
CTDSP1-210ENST00000491064 NGEFQ8N5V2 710 aa18.19■□□□□ 0.5
CTDSP1-210ENST00000491064 KDM3BQ7LBC6 1761 aa18.19■□□□□ 0.5
CTDSP1-210ENST00000491064 MAP3K15Q6ZN16 1313 aa18.19■□□□□ 0.5
CTDSP1-210ENST00000491064 RGS19P49795 217 aa18.18■□□□□ 0.5
CTDSP1-210ENST00000491064 MLLT1Q03111 559 aaPredicted RBP18.18■□□□□ 0.5
CTDSP1-210ENST00000491064 CRAMP1Q96RY5 1269 aa18.18■□□□□ 0.5
CTDSP1-210ENST00000491064 MIS18AQ9NYP9 233 aa18.18■□□□□ 0.5
CTDSP1-210ENST00000491064 UBN2Q6ZU65 1347 aa18.18■□□□□ 0.5
CTDSP1-210ENST00000491064 PPEF1O14829 653 aaPredicted RBP18.17■□□□□ 0.5
CTDSP1-210ENST00000491064 GPTP24298 496 aa18.17■□□□□ 0.5
CTDSP1-210ENST00000491064 TTLL7Q6ZT98 887 aa18.17■□□□□ 0.5
CTDSP1-210ENST00000491064 NIM1KQ8IY84 436 aa18.17■□□□□ 0.5
CTDSP1-210ENST00000491064 CCER1Q8TC90 406 aaPredicted RBP18.17■□□□□ 0.5
CTDSP1-210ENST00000491064 RBM17Q96I25 401 aaKnown RBP18.17■□□□□ 0.5
CTDSP1-210ENST00000491064 TSKSQ9UJT2 592 aa18.17■□□□□ 0.5
CTDSP1-210ENST00000491064 DLG5Q8TDM6 1919 aa18.17■□□□□ 0.5
CTDSP1-210ENST00000491064 CASP8AP2Q9UKL3 1982 aa18.17■□□□□ 0.5
CTDSP1-210ENST00000491064 TCERG1O14776 1098 aaKnown RBP18.16■□□□□ 0.5
CTDSP1-210ENST00000491064 AOC2O75106 756 aa18.16■□□□□ 0.5
CTDSP1-210ENST00000491064 MAP2K2P36507 400 aa18.16■□□□□ 0.5
CTDSP1-210ENST00000491064 SUSD4Q5VX71 490 aa18.16■□□□□ 0.5
CTDSP1-210ENST00000491064 KIF6Q6ZMV9 814 aa18.16■□□□□ 0.5
CTDSP1-210ENST00000491064 GPRC5DQ9NZD1 345 aa18.16■□□□□ 0.5
CTDSP1-210ENST00000491064 PPIP5K2O43314 1243 aa18.15■□□□□ 0.5
CTDSP1-210ENST00000491064 C3orf67Q6ZVT6 689 aa18.15■□□□□ 0.5
CTDSP1-210ENST00000491064 SAPCD2Q86UD0 394 aa18.15■□□□□ 0.5
CTDSP1-210ENST00000491064 ADARB2Q9NS39 739 aaKnown RBP18.15■□□□□ 0.5
CTDSP1-210ENST00000491064 RRP7AQ9Y3A4 280 aaKnown RBP18.15■□□□□ 0.5
CTDSP1-210ENST00000491064 NTSR2O95665 410 aa18.14■□□□□ 0.49
CTDSP1-210ENST00000491064 AOC3Q16853 763 aa18.14■□□□□ 0.49
CTDSP1-210ENST00000491064 ZNF34Q8IZ26 560 aa18.14■□□□□ 0.49
CTDSP1-210ENST00000491064 ZBTB3Q9H5J0 574 aa18.14■□□□□ 0.49
CTDSP1-210ENST00000491064 CELF2O95319 508 aaKnown RBP18.13■□□□□ 0.49
CTDSP1-210ENST00000491064 MYL6BP14649 208 aa18.13■□□□□ 0.49
CTDSP1-210ENST00000491064 VPS33BQ9H267 617 aa18.13■□□□□ 0.49
CTDSP1-210ENST00000491064 CA12O43570 354 aa18.12■□□□□ 0.49
CTDSP1-210ENST00000491064 PPP2R1AP30153 589 aa18.12■□□□□ 0.49
CTDSP1-210ENST00000491064 CXCL9Q07325 125 aa18.12■□□□□ 0.49
CTDSP1-210ENST00000491064 ZNRF3Q9ULT6 936 aa18.12■□□□□ 0.49
CTDSP1-210ENST00000491064 ATP6V0A2Q9Y487 856 aa18.12■□□□□ 0.49
CTDSP1-210ENST00000491064 EIF4A1P60842 406 aaKnown RBP18.11■□□□□ 0.49
CTDSP1-210ENST00000491064 GIGYF2Q6Y7W6 1299 aaKnown RBP18.11■□□□□ 0.49
CTDSP1-210ENST00000491064 PNISRQ8TF01 805 aaKnown RBP18.11■□□□□ 0.49
CTDSP1-210ENST00000491064 HHIPL1Q96JK4 782 aa18.11■□□□□ 0.49
CTDSP1-210ENST00000491064 GLIS2Q9BZE0 524 aaPredicted RBP18.11■□□□□ 0.49
CTDSP1-210ENST00000491064 MCOLN1Q9GZU1 580 aa18.11■□□□□ 0.49
CTDSP1-210ENST00000491064 PGAP2Q9UHJ9 254 aa18.11■□□□□ 0.49
CTDSP1-210ENST00000491064 GMPSP49915 693 aaPredicted RBP18.1■□□□□ 0.49
CTDSP1-210ENST00000491064 BRPF1P55201 1214 aaPredicted RBP18.1■□□□□ 0.49
CTDSP1-210ENST00000491064 PPP1R42Q7Z4L9 355 aa18.1■□□□□ 0.49
CTDSP1-210ENST00000491064 NLRP3Q96P20 1036 aa18.1■□□□□ 0.49
CTDSP1-210ENST00000491064 RTFDC1Q9BY42 306 aaPredicted RBP18.1■□□□□ 0.49
CTDSP1-210ENST00000491064 TMX4Q9H1E5 349 aaPredicted RBP18.1■□□□□ 0.49
CTDSP1-210ENST00000491064 LAMB2P55268 1798 aa18.09■□□□□ 0.49
CTDSP1-210ENST00000491064 ABCC4O15439 1325 aa18.09■□□□□ 0.49
CTDSP1-210ENST00000491064 CDHR2Q9BYE9 1310 aa18.09■□□□□ 0.49
CTDSP1-210ENST00000491064 PARP10Q53GL7 1025 aa18.09■□□□□ 0.49
CTDSP1-210ENST00000491064 SUPT20HQ8NEM7 779 aa18.09■□□□□ 0.49
CTDSP1-210ENST00000491064 PDE4DIPQ5VU43 2346 aa18.09■□□□□ 0.49
CTDSP1-210ENST00000491064 TNRC18O15417 2968 aaPredicted RBP18.09■□□□□ 0.49
CTDSP1-210ENST00000491064 HIRAP54198 1017 aaPredicted RBP18.08■□□□□ 0.48
CTDSP1-210ENST00000491064 SLC10A5Q5PT55 438 aa18.08■□□□□ 0.48
CTDSP1-210ENST00000491064 ANKRD36CQ5JPF3 1778 aa18.07■□□□□ 0.48
CTDSP1-210ENST00000491064 ERBB4Q15303 1308 aa18.07■□□□□ 0.48
CTDSP1-210ENST00000491064 CIAPIN1Q6FI81 312 aa18.07■□□□□ 0.48
CTDSP1-210ENST00000491064 ZC3H15Q8WU90 426 aaKnown RBP18.07■□□□□ 0.48
CTDSP1-210ENST00000491064 CFAP44Q96MT7 982 aa18.07■□□□□ 0.48
CTDSP1-210ENST00000491064 KIAA2012Q0VF49 1180 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms