RNA–Protein interactions for RNA: ENST00000490697.1

HDLBP-244, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-244ENST00000490697 GNAI1P63096 354 aa23.1■■□□□ 1.29
HDLBP-244ENST00000490697 FKBP4Q02790 459 aaKnown RBP eCLIP23.1■■□□□ 1.291e-6■■□□□ 12.8
HDLBP-244ENST00000490697 TCIRG1Q13488 830 aa23.1■■□□□ 1.29
HDLBP-244ENST00000490697 DUSP27Q5VZP5 1158 aa23.1■■□□□ 1.29
HDLBP-244ENST00000490697 RPGRQ92834 1020 aaKnown RBP23.1■■□□□ 1.29
HDLBP-244ENST00000490697 CHPF2Q9P2E5 772 aa23.1■■□□□ 1.29
HDLBP-244ENST00000490697 DBF4Q9UBU7 674 aaPredicted RBP23.1■■□□□ 1.29
HDLBP-244ENST00000490697 CC2D2BQ6DHV5 1058 aa23.09■■□□□ 1.29
HDLBP-244ENST00000490697 NLRP3Q96P20 1036 aa23.09■■□□□ 1.29
HDLBP-244ENST00000490697 RNF123Q5XPI4 1314 aa23.08■■□□□ 1.29
HDLBP-244ENST00000490697 CEP350Q5VT06 3117 aa23.08■■□□□ 1.29
HDLBP-244ENST00000490697 CCDC184Q52MB2 194 aa23.08■■□□□ 1.29
HDLBP-244ENST00000490697 RBM17Q96I25 401 aaKnown RBP23.08■■□□□ 1.29
HDLBP-244ENST00000490697 CRAMP1Q96RY5 1269 aa23.08■■□□□ 1.29
HDLBP-244ENST00000490697 OLFM4Q6UX06 510 aa23.07■■□□□ 1.28
HDLBP-244ENST00000490697 NLRP10Q86W26 655 aa23.07■■□□□ 1.28
HDLBP-244ENST00000490697 HYPKQ9NX55 129 aa23.07■■□□□ 1.28
HDLBP-244ENST00000490697 NUP98P52948 1817 aa23.07■■□□□ 1.28
HDLBP-244ENST00000490697 FER1L6Q2WGJ9 1857 aa23.07■■□□□ 1.28
HDLBP-244ENST00000490697 GRIPAP1Q4V328 841 aa23.06■■□□□ 1.28
HDLBP-244ENST00000490697 ANKRD13DQ6ZTN6 518 aa23.06■■□□□ 1.28
HDLBP-244ENST00000490697 PLBD2Q8NHP8 589 aa23.06■■□□□ 1.28
HDLBP-244ENST00000490697 POTECB2RU33 542 aa23.05■■□□□ 1.28
HDLBP-244ENST00000490697 C3orf67Q6ZVT6 689 aa23.05■■□□□ 1.28
HDLBP-244ENST00000490697 SYNE4Q8N205 404 aa23.05■■□□□ 1.28
HDLBP-244ENST00000490697 SMC1BQ8NDV3 1235 aa23.05■■□□□ 1.28
HDLBP-244ENST00000490697 ZNF277Q9NRM2 450 aaPredicted RBP23.05■■□□□ 1.28
HDLBP-244ENST00000490697 PSMD1Q99460 953 aa23.04■■□□□ 1.28
HDLBP-244ENST00000490697 ARFGEF2Q9Y6D5 1785 aa23.04■■□□□ 1.28
HDLBP-244ENST00000490697 ANP32CO43423 234 aa23.03■■□□□ 1.28
HDLBP-244ENST00000490697 TRMT112Q9UI30 125 aaKnown RBP23.03■■□□□ 1.28
HDLBP-244ENST00000490697 TNRC6CQ9HCJ0 1690 aaKnown RBP23.03■■□□□ 1.28
HDLBP-244ENST00000490697 CCDC27Q2M243 656 aa23.02■■□□□ 1.28
HDLBP-244ENST00000490697 CHMP4AQ9BY43 222 aa23.02■■□□□ 1.28
HDLBP-244ENST00000490697 DDNO94850 711 aaPredicted RBP23.01■■□□□ 1.27
HDLBP-244ENST00000490697 IARSP41252 1262 aaKnown RBP23.01■■□□□ 1.27
HDLBP-244ENST00000490697 NCBP3Q53F19 620 aaKnown RBP23.01■■□□□ 1.27
HDLBP-244ENST00000490697 ISCA1Q9BUE6 129 aa23.01■■□□□ 1.27
HDLBP-244ENST00000490697 SH3TC1Q8TE82 1336 aa23.01■■□□□ 1.27
HDLBP-244ENST00000490697 SNED1Q8TER0 1413 aa23■■□□□ 1.27
HDLBP-244ENST00000490697 PPEF1O14829 653 aaPredicted RBP23■■□□□ 1.27
HDLBP-244ENST00000490697 C8orf58Q8NAV2 365 aa23■■□□□ 1.27
HDLBP-244ENST00000490697 ELL2O00472 640 aaPredicted RBP22.99■■□□□ 1.27
HDLBP-244ENST00000490697 HCLS1P14317 486 aaPredicted RBP22.99■■□□□ 1.27
HDLBP-244ENST00000490697 TRIM28Q13263 835 aaKnown RBP22.99■■□□□ 1.27
HDLBP-244ENST00000490697 MRS2Q9HD23 443 aa22.99■■□□□ 1.27
HDLBP-244ENST00000490697 TIAM2Q8IVF5 1701 aa22.99■■□□□ 1.27
HDLBP-244ENST00000490697 FZD9O00144 591 aa22.98■■□□□ 1.27
HDLBP-244ENST00000490697 BBOX1O75936 387 aa22.98■■□□□ 1.27
HDLBP-244ENST00000490697 DNAJC5GQ8N7S2 189 aa22.98■■□□□ 1.27
HDLBP-244ENST00000490697 L3MBTL3Q96JM7 780 aaPredicted RBP22.98■■□□□ 1.27
HDLBP-244ENST00000490697 TMX4Q9H1E5 349 aaPredicted RBP22.98■■□□□ 1.27
HDLBP-244ENST00000490697 ATP6V0A2Q9Y487 856 aa22.98■■□□□ 1.27
HDLBP-244ENST00000490697 WDR90Q96KV7 1748 aa22.97■■□□□ 1.27
HDLBP-244ENST00000490697 IQCA1LA6NCM1 817 aa22.97■■□□□ 1.27
HDLBP-244ENST00000490697 JDP2Q8WYK2 163 aa22.97■■□□□ 1.27
HDLBP-244ENST00000490697 CCDC88AQ3V6T2 1871 aa22.96■■□□□ 1.27
HDLBP-244ENST00000490697 CCDC30Q5VVM6 783 aa22.96■■□□□ 1.27
HDLBP-244ENST00000490697 WWC1Q8IX03 1113 aa22.96■■□□□ 1.27
HDLBP-244ENST00000490697 ABCC4O15439 1325 aa22.96■■□□□ 1.27
HDLBP-244ENST00000490697 DICER1Q9UPY3 1922 aaKnown RBP22.96■■□□□ 1.27
HDLBP-244ENST00000490697 ATP5J2-PTCD1G3V325 749 aa22.95■■□□□ 1.26
HDLBP-244ENST00000490697 TCERG1O14776 1098 aaKnown RBP22.95■■□□□ 1.26
HDLBP-244ENST00000490697 GOLGA2Q08379 1002 aa22.95■■□□□ 1.26
HDLBP-244ENST00000490697 DDX46Q7L014 1031 aaKnown RBP22.95■■□□□ 1.26
HDLBP-244ENST00000490697 RIC3Q7Z5B4 369 aa22.95■■□□□ 1.26
HDLBP-244ENST00000490697 CACNA1SQ13698 1873 aa22.94■■□□□ 1.26
HDLBP-244ENST00000490697 ZNF541Q9H0D2 1346 aa22.94■■□□□ 1.26
HDLBP-244ENST00000490697 SP8Q8IXZ3 490 aa22.94■■□□□ 1.26
HDLBP-244ENST00000490697 PHAXQ9H814 394 aaKnown RBP22.94■■□□□ 1.26
HDLBP-244ENST00000490697 IL16Q14005 1332 aa22.93■■□□□ 1.26
HDLBP-244ENST00000490697 FAM89AQ96GI7 184 aa22.93■■□□□ 1.26
HDLBP-244ENST00000490697 VPS33BQ9H267 617 aa22.93■■□□□ 1.26
HDLBP-244ENST00000490697 GRAPQ13588 217 aa22.92■■□□□ 1.26
HDLBP-244ENST00000490697 SF3B3Q15393 1217 aaKnown RBP22.92■■□□□ 1.26
HDLBP-244ENST00000490697 LARGE2Q8N3Y3 721 aa22.92■■□□□ 1.26
HDLBP-244ENST00000490697 TSPYL6Q8N831 410 aa22.92■■□□□ 1.26
HDLBP-244ENST00000490697 GRAPLQ8TC17 118 aaPredicted RBP22.92■■□□□ 1.26
HDLBP-244ENST00000490697 TAF1DQ9H5J8 278 aaPredicted RBP22.92■■□□□ 1.26
HDLBP-244ENST00000490697 EIF6P56537 245 aaKnown RBP22.91■■□□□ 1.26
HDLBP-244ENST00000490697 CHADLQ6NUI6 762 aa22.91■■□□□ 1.26
HDLBP-244ENST00000490697 TMC4Q7Z404 712 aa22.91■■□□□ 1.26
HDLBP-244ENST00000490697 SLC51AQ86UW1 340 aa22.91■■□□□ 1.26
HDLBP-244ENST00000490697 GPC2Q8N158 579 aa22.91■■□□□ 1.26
HDLBP-244ENST00000490697 SUPT20HQ8NEM7 779 aa22.91■■□□□ 1.26
HDLBP-244ENST00000490697 TSR2Q969E8 191 aaKnown RBP22.91■■□□□ 1.26
HDLBP-244ENST00000490697 RTFDC1Q9BY42 306 aaPredicted RBP22.91■■□□□ 1.26
HDLBP-244ENST00000490697 DDX58O95786 925 aaKnown RBP22.9■■□□□ 1.26
HDLBP-244ENST00000490697 ZNF428Q96B54 188 aa22.9■■□□□ 1.26
HDLBP-244ENST00000490697 HACL1Q9UJ83 578 aa22.9■■□□□ 1.26
HDLBP-244ENST00000490697 HSP90B1P14625 803 aaKnown RBP22.89■■□□□ 1.25
HDLBP-244ENST00000490697 HTRA3P83110 453 aa22.89■■□□□ 1.25
HDLBP-244ENST00000490697 ZBTB38Q8NAP3 1195 aaPredicted RBP22.89■■□□□ 1.25
HDLBP-244ENST00000490697 ANKRD36CQ5JPF3 1778 aa22.89■■□□□ 1.25
HDLBP-244ENST00000490697 IRS4O14654 1257 aaPredicted RBP22.88■■□□□ 1.25
HDLBP-244ENST00000490697 DPP8Q6V1X1 898 aaPredicted RBP22.88■■□□□ 1.25
HDLBP-244ENST00000490697 LDHDQ86WU2 507 aa22.88■■□□□ 1.25
HDLBP-244ENST00000490697 NIM1KQ8IY84 436 aa22.88■■□□□ 1.25
HDLBP-244ENST00000490697 MPNDQ8N594 471 aa22.88■■□□□ 1.25
HDLBP-244ENST00000490697 CCDC191Q8NCU4 936 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 812.6 ms