RNA–Protein interactions for RNA: ENST00000490667.1

SHC1-211, Transcript of SHC adaptor protein 1, humanhuman

TSL 2

Gene SHC1, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-211ENST00000490667 NLRP3Q96P20 1036 aa16.99■□□□□ 0.31
SHC1-211ENST00000490667 TRMT112Q9UI30 125 aaKnown RBP16.99■□□□□ 0.31
SHC1-211ENST00000490667 BRCA1P38398 1863 aaKnown RBP16.99■□□□□ 0.31
SHC1-211ENST00000490667 HOXA10P31260 410 aaPredicted RBP16.98■□□□□ 0.31
SHC1-211ENST00000490667 RIC3Q7Z5B4 369 aa16.98■□□□□ 0.31
SHC1-211ENST00000490667 RNF123Q5XPI4 1314 aa16.97■□□□□ 0.31
SHC1-211ENST00000490667 ANKRD31Q8N7Z5 1873 aa16.97■□□□□ 0.31
SHC1-211ENST00000490667 ATP5J2-PTCD1G3V325 749 aa16.97■□□□□ 0.31
SHC1-211ENST00000490667 GOLGA2Q08379 1002 aa16.97■□□□□ 0.31
SHC1-211ENST00000490667 TWISTNBQ3B726 338 aaPredicted RBP16.97■□□□□ 0.31
SHC1-211ENST00000490667 C3orf67Q6ZVT6 689 aa16.97■□□□□ 0.31
SHC1-211ENST00000490667 SYNE4Q8N205 404 aa16.97■□□□□ 0.31
SHC1-211ENST00000490667 RBM17Q96I25 401 aaKnown RBP16.97■□□□□ 0.31
SHC1-211ENST00000490667 ISCA1Q9BUE6 129 aa16.97■□□□□ 0.31
SHC1-211ENST00000490667 TAOK3Q9H2K8 898 aa16.97■□□□□ 0.31
SHC1-211ENST00000490667 ARFGEF1Q9Y6D6 1849 aa16.96■□□□□ 0.31
SHC1-211ENST00000490667 TRIM28Q13263 835 aaKnown RBP16.96■□□□□ 0.31
SHC1-211ENST00000490667 CCDC93Q567U6 631 aa16.96■□□□□ 0.31
SHC1-211ENST00000490667 ZNF428Q96B54 188 aa16.96■□□□□ 0.31
SHC1-211ENST00000490667 CRAMP1Q96RY5 1269 aa16.96■□□□□ 0.31
SHC1-211ENST00000490667 RIC1Q4ADV7 1423 aa16.96■□□□□ 0.3
SHC1-211ENST00000490667 LTBP3Q9NS15 1303 aa16.96■□□□□ 0.3
SHC1-211ENST00000490667 TCERG1O14776 1098 aaKnown RBP16.95■□□□□ 0.3
SHC1-211ENST00000490667 KIF3CO14782 793 aa16.95■□□□□ 0.3
SHC1-211ENST00000490667 HCLS1P14317 486 aaPredicted RBP16.95■□□□□ 0.3
SHC1-211ENST00000490667 OLFM4Q6UX06 510 aa16.95■□□□□ 0.3
SHC1-211ENST00000490667 RTKN2Q8IZC4 609 aa16.95■□□□□ 0.3
SHC1-211ENST00000490667 STK31Q9BXU1 1019 aa16.95■□□□□ 0.3
SHC1-211ENST00000490667 NMRK2Q9NPI5 230 aa16.95■□□□□ 0.3
SHC1-211ENST00000490667 KDM2BQ8NHM5 1336 aa16.95■□□□□ 0.3
SHC1-211ENST00000490667 SH3TC1Q8TE82 1336 aa16.95■□□□□ 0.3
SHC1-211ENST00000490667 FANCIQ9NVI1 1328 aa16.95■□□□□ 0.3
SHC1-211ENST00000490667 ZC3H4Q9UPT8 1303 aaKnown RBP16.95■□□□□ 0.3
SHC1-211ENST00000490667 DDX58O95786 925 aaKnown RBP16.94■□□□□ 0.3
SHC1-211ENST00000490667 DLEC1Q9Y238 1755 aa16.93■□□□□ 0.3
SHC1-211ENST00000490667 FKBP4Q02790 459 aaKnown RBP eCLIP16.93■□□□□ 0.3
SHC1-211ENST00000490667 EXOSC9Q06265 439 aaKnown RBP16.93■□□□□ 0.3
SHC1-211ENST00000490667 CC2D2BQ6DHV5 1058 aa16.93■□□□□ 0.3
SHC1-211ENST00000490667 FAM89AQ96GI7 184 aa16.93■□□□□ 0.3
SHC1-211ENST00000490667 SPINK5Q9NQ38 1064 aaPredicted RBP16.93■□□□□ 0.3
SHC1-211ENST00000490667 NUP98P52948 1817 aa16.92■□□□□ 0.3
SHC1-211ENST00000490667 GLTPD2A6NH11 291 aa16.92■□□□□ 0.3
SHC1-211ENST00000490667 SLC4A2P04920 1241 aa16.92■□□□□ 0.3
SHC1-211ENST00000490667 DPY19L2Q6NUT2 758 aa16.92■□□□□ 0.3
SHC1-211ENST00000490667 MYD88Q99836 296 aa16.92■□□□□ 0.3
SHC1-211ENST00000490667 MYH16Q9H6N6 1097 aa16.92■□□□□ 0.3
SHC1-211ENST00000490667 RRAGCQ9HB90 399 aa16.92■□□□□ 0.3
SHC1-211ENST00000490667 COL11A2P13942 1736 aaPredicted RBP16.92■□□□□ 0.3
SHC1-211ENST00000490667 VAMP4O75379 141 aa16.91■□□□□ 0.3
SHC1-211ENST00000490667 KSR2Q6VAB6 950 aa16.91■□□□□ 0.3
SHC1-211ENST00000490667 METTL22Q9BUU2 404 aaPredicted RBP16.91■□□□□ 0.3
SHC1-211ENST00000490667 PPEF1O14829 653 aaPredicted RBP16.9■□□□□ 0.3
SHC1-211ENST00000490667 RTL5Q5HYW3 569 aaPredicted RBP16.9■□□□□ 0.3
SHC1-211ENST00000490667 DDX46Q7L014 1031 aaKnown RBP16.9■□□□□ 0.3
SHC1-211ENST00000490667 G2E3Q7L622 706 aa16.9■□□□□ 0.3
SHC1-211ENST00000490667 ZNF277Q9NRM2 450 aaPredicted RBP16.9■□□□□ 0.3
SHC1-211ENST00000490667 MAP3K2Q9Y2U5 619 aa16.9■□□□□ 0.3
SHC1-211ENST00000490667 SLX4Q8IY92 1834 aa16.9■□□□□ 0.3
SHC1-211ENST00000490667 PI4KAP2A4QPH2 592 aa16.89■□□□□ 0.29
SHC1-211ENST00000490667 CCER2I3L3R5 266 aa16.89■□□□□ 0.29
SHC1-211ENST00000490667 IRS4O14654 1257 aaPredicted RBP16.89■□□□□ 0.29
SHC1-211ENST00000490667 BBOX1O75936 387 aa16.89■□□□□ 0.29
SHC1-211ENST00000490667 TOMM70O94826 608 aa16.89■□□□□ 0.29
SHC1-211ENST00000490667 GRIPAP1Q4V328 841 aa16.89■□□□□ 0.29
SHC1-211ENST00000490667 PI4KAP1Q8N8J0 262 aa16.89■□□□□ 0.29
SHC1-211ENST00000490667 ZBTB38Q8NAP3 1195 aaPredicted RBP16.89■□□□□ 0.29
SHC1-211ENST00000490667 CCDC191Q8NCU4 936 aa16.89■□□□□ 0.29
SHC1-211ENST00000490667 PSMD1Q99460 953 aa16.89■□□□□ 0.29
SHC1-211ENST00000490667 TMX4Q9H1E5 349 aaPredicted RBP16.89■□□□□ 0.29
SHC1-211ENST00000490667 ABCC4O15439 1325 aa16.89■□□□□ 0.29
SHC1-211ENST00000490667 C16orf71Q8IYS4 520 aaPredicted RBP16.88■□□□□ 0.29
SHC1-211ENST00000490667 CWC25Q9NXE8 425 aaPredicted RBP16.88■□□□□ 0.29
SHC1-211ENST00000490667 ATP6V0A2Q9Y487 856 aa16.88■□□□□ 0.29
SHC1-211ENST00000490667 SF3B3Q15393 1217 aaKnown RBP16.87■□□□□ 0.29
SHC1-211ENST00000490667 ZNF521Q96K83 1311 aa16.87■□□□□ 0.29
SHC1-211ENST00000490667 TNRC6CQ9HCJ0 1690 aaKnown RBP16.87■□□□□ 0.29
SHC1-211ENST00000490667 PCCAP05165 728 aaPredicted RBP16.86■□□□□ 0.29
SHC1-211ENST00000490667 HSP90B1P14625 803 aaKnown RBP16.86■□□□□ 0.29
SHC1-211ENST00000490667 VEGFAP15692 232 aaPredicted RBP16.86■□□□□ 0.29
SHC1-211ENST00000490667 IARSP41252 1262 aaKnown RBP16.86■□□□□ 0.29
SHC1-211ENST00000490667 NEXNQ0ZGT2 675 aa16.86■□□□□ 0.29
SHC1-211ENST00000490667 FLIIQ13045 1269 aa16.86■□□□□ 0.29
SHC1-211ENST00000490667 GRAPQ13588 217 aa16.86■□□□□ 0.29
SHC1-211ENST00000490667 SLC51AQ86UW1 340 aa16.86■□□□□ 0.29
SHC1-211ENST00000490667 SP8Q8IXZ3 490 aa16.86■□□□□ 0.29
SHC1-211ENST00000490667 GRAPLQ8TC17 118 aaPredicted RBP16.86■□□□□ 0.29
SHC1-211ENST00000490667 JARID2Q92833 1246 aaPredicted RBP16.86■□□□□ 0.29
SHC1-211ENST00000490667 DDNO94850 711 aaPredicted RBP16.85■□□□□ 0.29
SHC1-211ENST00000490667 IGKV5-2P06315 115 aa16.85■□□□□ 0.29
SHC1-211ENST00000490667 POTECB2RU33 542 aa16.84■□□□□ 0.29
SHC1-211ENST00000490667 FKBP5Q13451 457 aaPredicted RBP16.84■□□□□ 0.29
SHC1-211ENST00000490667 RBM46Q8TBY0 533 aaKnown RBP16.84■□□□□ 0.29
SHC1-211ENST00000490667 JDP2Q8WYK2 163 aa16.84■□□□□ 0.29
SHC1-211ENST00000490667 TMC4Q7Z404 712 aa16.83■□□□□ 0.28
SHC1-211ENST00000490667 SNED1Q8TER0 1413 aa16.83■□□□□ 0.28
SHC1-211ENST00000490667 NEURL1BA8MQ27 555 aa16.82■□□□□ 0.28
SHC1-211ENST00000490667 FZD9O00144 591 aa16.82■□□□□ 0.28
SHC1-211ENST00000490667 PDE8AO60658 829 aa16.82■□□□□ 0.28
SHC1-211ENST00000490667 CWF19L2Q2TBE0 894 aaKnown RBP16.82■□□□□ 0.28
SHC1-211ENST00000490667 DPP8Q6V1X1 898 aaPredicted RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms