RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 ZNF652Q9Y2D9 606 aa18.64■□□□□ 0.57
EXOSC3-207ENST00000490516 HUNKP57058 714 aa18.63■□□□□ 0.57
EXOSC3-207ENST00000490516 TEFQ10587 303 aa18.63■□□□□ 0.57
EXOSC3-207ENST00000490516 NIM1KQ8IY84 436 aa18.63■□□□□ 0.57
EXOSC3-207ENST00000490516 PANK3Q9H999 370 aa18.63■□□□□ 0.57
EXOSC3-207ENST00000490516 PGAP2Q9UHJ9 254 aa18.63■□□□□ 0.57
EXOSC3-207ENST00000490516 FAM155AB1AL88 458 aaPredicted RBP18.62■□□□□ 0.57
EXOSC3-207ENST00000490516 KCNQ3O43525 872 aa18.62■□□□□ 0.57
EXOSC3-207ENST00000490516 TRPA1O75762 1119 aa18.62■□□□□ 0.57
EXOSC3-207ENST00000490516 CC2D2BQ6DHV5 1058 aa18.62■□□□□ 0.57
EXOSC3-207ENST00000490516 DLK2Q6UY11 383 aa18.62■□□□□ 0.57
EXOSC3-207ENST00000490516 IL17REQ8NFR9 667 aa18.62■□□□□ 0.57
EXOSC3-207ENST00000490516 RNF186Q9NXI6 227 aa18.62■□□□□ 0.57
EXOSC3-207ENST00000490516 SAGE1Q9NXZ1 904 aa18.62■□□□□ 0.57
EXOSC3-207ENST00000490516 USP16Q9Y5T5 823 aa18.62■□□□□ 0.57
EXOSC3-207ENST00000490516 GMPSP49915 693 aaPredicted RBP18.61■□□□□ 0.57
EXOSC3-207ENST00000490516 HIRAP54198 1017 aaPredicted RBP18.61■□□□□ 0.57
EXOSC3-207ENST00000490516 CRY2Q49AN0 593 aa18.61■□□□□ 0.57
EXOSC3-207ENST00000490516 CTU1Q7Z7A3 348 aaKnown RBP18.61■□□□□ 0.57
EXOSC3-207ENST00000490516 POLR2AP24928 1970 aaKnown RBP18.61■□□□□ 0.57
EXOSC3-207ENST00000490516 ABCC12Q96J65 1359 aa18.6■□□□□ 0.57
EXOSC3-207ENST00000490516 NPC1L1Q9UHC9 1359 aa18.6■□□□□ 0.57
EXOSC3-207ENST00000490516 PRAMEF22A3QJZ6 481 aa18.6■□□□□ 0.57
EXOSC3-207ENST00000490516 TCERG1O14776 1098 aaKnown RBP18.6■□□□□ 0.57
EXOSC3-207ENST00000490516 GTF2E1P29083 439 aaPredicted RBP18.6■□□□□ 0.57
EXOSC3-207ENST00000490516 KIF23Q02241 960 aaPredicted RBP18.6■□□□□ 0.57
EXOSC3-207ENST00000490516 AOC3Q16853 763 aa18.6■□□□□ 0.57
EXOSC3-207ENST00000490516 HABP4Q5JVS0 413 aaKnown RBP18.6■□□□□ 0.57
EXOSC3-207ENST00000490516 CDC37L1Q7L3B6 337 aa18.6■□□□□ 0.57
EXOSC3-207ENST00000490516 NBPF15Q8N660 670 aa18.6■□□□□ 0.57
EXOSC3-207ENST00000490516 GCC1Q96CN9 775 aa18.6■□□□□ 0.57
EXOSC3-207ENST00000490516 HPS5Q9UPZ3 1129 aa18.6■□□□□ 0.57
EXOSC3-207ENST00000490516 PPIP5K2O43314 1243 aa18.59■□□□□ 0.57
EXOSC3-207ENST00000490516 CXCL9Q07325 125 aa18.59■□□□□ 0.57
EXOSC3-207ENST00000490516 HLFQ16534 295 aa18.58■□□□□ 0.56
EXOSC3-207ENST00000490516 RGMBQ6NW40 437 aa18.58■□□□□ 0.56
EXOSC3-207ENST00000490516 USP48Q86UV5 1035 aa18.58■□□□□ 0.56
EXOSC3-207ENST00000490516 NUTM1Q86Y26 1132 aa18.58■□□□□ 0.56
EXOSC3-207ENST00000490516 TRPM4Q8TD43 1214 aa18.58■□□□□ 0.56
EXOSC3-207ENST00000490516 ZC3H15Q8WU90 426 aaKnown RBP18.57■□□□□ 0.56
EXOSC3-207ENST00000490516 RPGRQ92834 1020 aaKnown RBP18.57■□□□□ 0.56
EXOSC3-207ENST00000490516 SHTN1A0MZ66 631 aa18.56■□□□□ 0.56
EXOSC3-207ENST00000490516 GRIPAP1Q4V328 841 aa18.56■□□□□ 0.56
EXOSC3-207ENST00000490516 NUP98P52948 1817 aa18.56■□□□□ 0.56
EXOSC3-207ENST00000490516 GNAT3A8MTJ3 354 aa18.55■□□□□ 0.56
EXOSC3-207ENST00000490516 NBPF26B4DH59 902 aa18.55■□□□□ 0.56
EXOSC3-207ENST00000490516 PPEF1O14829 653 aaPredicted RBP18.55■□□□□ 0.56
EXOSC3-207ENST00000490516 HOXA10P31260 410 aaPredicted RBP18.55■□□□□ 0.56
EXOSC3-207ENST00000490516 NBPF10Q6P3W6 841 aaKnown RBP18.55■□□□□ 0.56
EXOSC3-207ENST00000490516 ZNRF3Q9ULT6 936 aa18.55■□□□□ 0.56
EXOSC3-207ENST00000490516 ZNF157P51786 506 aaPredicted RBP18.54■□□□□ 0.56
EXOSC3-207ENST00000490516 BCL2L13Q9BXK5 485 aa18.54■□□□□ 0.56
EXOSC3-207ENST00000490516 BTBD11A6QL63 1104 aa18.53■□□□□ 0.56
EXOSC3-207ENST00000490516 RIC1Q4ADV7 1423 aa18.53■□□□□ 0.56
EXOSC3-207ENST00000490516 CCDC102AQ96A19 550 aa18.53■□□□□ 0.56
EXOSC3-207ENST00000490516 CSRNP1Q96S65 589 aa18.53■□□□□ 0.56
EXOSC3-207ENST00000490516 GBA2Q9HCG7 927 aaPredicted RBP18.53■□□□□ 0.56
EXOSC3-207ENST00000490516 KIF7Q2M1P5 1343 aa18.52■□□□□ 0.56
EXOSC3-207ENST00000490516 RGL2O15211 777 aa18.52■□□□□ 0.56
EXOSC3-207ENST00000490516 RAD17O75943 681 aa18.52■□□□□ 0.56
EXOSC3-207ENST00000490516 CDHR2Q9BYE9 1310 aa18.51■□□□□ 0.55
EXOSC3-207ENST00000490516 RBM17Q96I25 401 aaKnown RBP18.51■□□□□ 0.55
EXOSC3-207ENST00000490516 CRAMP1Q96RY5 1269 aa18.51■□□□□ 0.55
EXOSC3-207ENST00000490516 NYXQ9GZU5 481 aa18.51■□□□□ 0.55
EXOSC3-207ENST00000490516 CNOT7Q9UIV1 285 aaKnown RBP18.51■□□□□ 0.55
EXOSC3-207ENST00000490516 CEMIPQ8WUJ3 1361 aa18.51■□□□□ 0.55
EXOSC3-207ENST00000490516 DIAPH1O60610 1272 aaKnown RBP18.5■□□□□ 0.55
EXOSC3-207ENST00000490516 C2orf69Q8N8R5 385 aa18.5■□□□□ 0.55
EXOSC3-207ENST00000490516 SLC10A3P09131 477 aa18.49■□□□□ 0.55
EXOSC3-207ENST00000490516 SNRPA1P09661 255 aaKnown RBP18.49■□□□□ 0.55
EXOSC3-207ENST00000490516 C3orf67Q6ZVT6 689 aa18.49■□□□□ 0.55
EXOSC3-207ENST00000490516 KRT26Q7Z3Y9 468 aa18.49■□□□□ 0.55
EXOSC3-207ENST00000490516 GAS2L2Q8NHY3 880 aa18.49■□□□□ 0.55
EXOSC3-207ENST00000490516 VPS33BQ9H267 617 aa18.49■□□□□ 0.55
EXOSC3-207ENST00000490516 ADM5C9JUS6 153 aa18.48■□□□□ 0.55
EXOSC3-207ENST00000490516 TNIP1Q15025 636 aa18.48■□□□□ 0.55
EXOSC3-207ENST00000490516 PKN2Q16513 984 aaKnown RBP18.48■□□□□ 0.55
EXOSC3-207ENST00000490516 MICALL2Q8IY33 904 aa18.48■□□□□ 0.55
EXOSC3-207ENST00000490516 HDAC9Q9UKV0 1011 aa18.48■□□□□ 0.55
EXOSC3-207ENST00000490516 H7C1D1 291 aa18.47■□□□□ 0.55
EXOSC3-207ENST00000490516 FXR1P51114 621 aaKnown RBP eCLIP18.47■□□□□ 0.55
EXOSC3-207ENST00000490516 SAMD7Q7Z3H4 446 aa18.47■□□□□ 0.55
EXOSC3-207ENST00000490516 ATP6V0A2Q9Y487 856 aa18.47■□□□□ 0.55
EXOSC3-207ENST00000490516 MKI67P46013 3256 aaKnown RBP18.46■□□□□ 0.55
EXOSC3-207ENST00000490516 EGFRP00533 1210 aa18.46■□□□□ 0.55
EXOSC3-207ENST00000490516 GPTP24298 496 aa18.46■□□□□ 0.55
EXOSC3-207ENST00000490516 NGEFQ8N5V2 710 aa18.46■□□□□ 0.55
EXOSC3-207ENST00000490516 SUPT20HQ8NEM7 779 aa18.46■□□□□ 0.55
EXOSC3-207ENST00000490516 RTFDC1Q9BY42 306 aaPredicted RBP18.46■□□□□ 0.55
EXOSC3-207ENST00000490516 KNSTRNQ9Y448 316 aa18.46■□□□□ 0.55
EXOSC3-207ENST00000490516 UBN2Q6ZU65 1347 aa18.46■□□□□ 0.55
EXOSC3-207ENST00000490516 YDJCA8MPS7 323 aa18.45■□□□□ 0.54
EXOSC3-207ENST00000490516 TBC1D10BQ4KMP7 808 aaPredicted RBP18.45■□□□□ 0.54
EXOSC3-207ENST00000490516 ZNF296Q8WUU4 475 aaPredicted RBP18.45■□□□□ 0.54
EXOSC3-207ENST00000490516 TMX4Q9H1E5 349 aaPredicted RBP18.45■□□□□ 0.54
EXOSC3-207ENST00000490516 ZBTB12Q9Y330 459 aaPredicted RBP18.45■□□□□ 0.54
EXOSC3-207ENST00000490516 LAMB4A4D0S4 1761 aa18.45■□□□□ 0.54
EXOSC3-207ENST00000490516 KIAA2012Q0VF49 1180 aa18.44■□□□□ 0.54
EXOSC3-207ENST00000490516 SUSD4Q5VX71 490 aa18.44■□□□□ 0.54
EXOSC3-207ENST00000490516 DPP8Q6V1X1 898 aaPredicted RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms