RNA–Protein interactions for RNA: ENST00000490456.6

SKAP2-207, Transcript of src kinase associated phosphoprotein 2, humanhuman

TSL 4

Gene SKAP2, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-207ENST00000490456 CABP4P57796 275 aa11.67□□□□□ -0.54
SKAP2-207ENST00000490456 GAS2L2Q8NHY3 880 aa11.67□□□□□ -0.54
SKAP2-207ENST00000490456 PNNQ9H307 717 aaKnown RBP11.67□□□□□ -0.54
SKAP2-207ENST00000490456 PTCD1O75127 700 aaKnown RBP11.66□□□□□ -0.54
SKAP2-207ENST00000490456 AKAP4Q5JQC9 854 aa11.66□□□□□ -0.54
SKAP2-207ENST00000490456 VARS2Q5ST30 1063 aaKnown RBP11.66□□□□□ -0.54
SKAP2-207ENST00000490456 IFNLR1Q8IU57 520 aaPredicted RBP11.66□□□□□ -0.54
SKAP2-207ENST00000490456 ABHD8Q96I13 439 aa11.66□□□□□ -0.54
SKAP2-207ENST00000490456 PLEKHF1Q96S99 279 aa11.66□□□□□ -0.54
SKAP2-207ENST00000490456 ZSWIM6Q9HCJ5 1215 aa11.66□□□□□ -0.54
SKAP2-207ENST00000490456 ADAMTS8Q9UP79 889 aa11.66□□□□□ -0.54
SKAP2-207ENST00000490456 SCN11AQ9UI33 1791 aa11.66□□□□□ -0.54
SKAP2-207ENST00000490456 MAPK8IP3Q9UPT6 1336 aa11.65□□□□□ -0.54
SKAP2-207ENST00000490456 H0YIN7 160 aa11.65□□□□□ -0.54
SKAP2-207ENST00000490456 LBX1P52954 281 aa11.65□□□□□ -0.54
SKAP2-207ENST00000490456 MLLT1Q03111 559 aaPredicted RBP11.65□□□□□ -0.54
SKAP2-207ENST00000490456 ERFEQ4G0M1 354 aa11.65□□□□□ -0.54
SKAP2-207ENST00000490456 USPL1Q5W0Q7 1092 aa11.65□□□□□ -0.54
SKAP2-207ENST00000490456 CCDC146Q8IYE0 955 aa11.65□□□□□ -0.54
SKAP2-207ENST00000490456 EFCAB3Q8N7B9 438 aa11.65□□□□□ -0.54
SKAP2-207ENST00000490456 WBP1LQ9NX94 342 aa11.65□□□□□ -0.54
SKAP2-207ENST00000490456 PASKQ96RG2 1323 aa11.64□□□□□ -0.55
SKAP2-207ENST00000490456 CACNA1SQ13698 1873 aa11.64□□□□□ -0.55
SKAP2-207ENST00000490456 ANKRD31Q8N7Z5 1873 aa11.64□□□□□ -0.55
SKAP2-207ENST00000490456 VEGFBP49765 207 aa11.64□□□□□ -0.55
SKAP2-207ENST00000490456 C2CD5Q86YS7 1000 aa11.64□□□□□ -0.55
SKAP2-207ENST00000490456 ARFGEF2Q9Y6D5 1785 aa11.64□□□□□ -0.55
SKAP2-207ENST00000490456 IQCA1LA6NCM1 817 aa11.63□□□□□ -0.55
SKAP2-207ENST00000490456 TMEM88BA6NKF7 163 aa11.63□□□□□ -0.55
SKAP2-207ENST00000490456 GNAT3A8MTJ3 354 aa11.63□□□□□ -0.55
SKAP2-207ENST00000490456 SERPINB2P05120 415 aa11.63□□□□□ -0.55
SKAP2-207ENST00000490456 NFIXQ14938 502 aa11.63□□□□□ -0.55
SKAP2-207ENST00000490456 INTS5Q6P9B9 1019 aaKnown RBP11.63□□□□□ -0.55
SKAP2-207ENST00000490456 LDHDQ86WU2 507 aa11.63□□□□□ -0.55
SKAP2-207ENST00000490456 PNISRQ8TF01 805 aaKnown RBP11.63□□□□□ -0.55
SKAP2-207ENST00000490456 NARFQ9UHQ1 456 aa11.63□□□□□ -0.55
SKAP2-207ENST00000490456 PDZRN3Q9UPQ7 1066 aa11.63□□□□□ -0.55
SKAP2-207ENST00000490456 COL11A2P13942 1736 aaPredicted RBP11.63□□□□□ -0.55
SKAP2-207ENST00000490456 SOS1Q07889 1333 aaPredicted RBP11.62□□□□□ -0.55
SKAP2-207ENST00000490456 LTBP3Q9NS15 1303 aa11.62□□□□□ -0.55
SKAP2-207ENST00000490456 RNMTO43148 476 aaKnown RBP11.62□□□□□ -0.55
SKAP2-207ENST00000490456 HSPA8P11142 646 aaKnown RBP11.62□□□□□ -0.55
SKAP2-207ENST00000490456 RUNDC1Q96C34 613 aa11.62□□□□□ -0.55
SKAP2-207ENST00000490456 LGR6Q9HBX8 967 aa11.62□□□□□ -0.55
SKAP2-207ENST00000490456 COL15A1P39059 1388 aa11.62□□□□□ -0.55
SKAP2-207ENST00000490456 THSD7BQ9C0I4 1608 aa11.61□□□□□ -0.55
SKAP2-207ENST00000490456 RGS19P49795 217 aa11.61□□□□□ -0.55
SKAP2-207ENST00000490456 MAP2K1Q02750 393 aaPredicted RBP11.61□□□□□ -0.55
SKAP2-207ENST00000490456 NFE2L2Q16236 605 aa11.61□□□□□ -0.55
SKAP2-207ENST00000490456 NFATC2IPQ8NCF5 419 aa11.61□□□□□ -0.55
SKAP2-207ENST00000490456 RTF1Q92541 710 aaKnown RBP11.61□□□□□ -0.55
SKAP2-207ENST00000490456 CARMIL3Q8ND23 1372 aa11.61□□□□□ -0.55
SKAP2-207ENST00000490456 ADAMTSL1Q8N6G6 1762 aa11.61□□□□□ -0.55
SKAP2-207ENST00000490456 CCER2I3L3R5 266 aa11.6□□□□□ -0.55
SKAP2-207ENST00000490456 DDNO94850 711 aaPredicted RBP11.6□□□□□ -0.55
SKAP2-207ENST00000490456 FAM9BQ8IZU0 186 aa11.6□□□□□ -0.55
SKAP2-207ENST00000490456 TAOK3Q9H2K8 898 aa11.6□□□□□ -0.55
SKAP2-207ENST00000490456 RRP7AQ9Y3A4 280 aaKnown RBP11.6□□□□□ -0.55
SKAP2-207ENST00000490456 SCN7AQ01118 1682 aa11.59□□□□□ -0.55
SKAP2-207ENST00000490456 RASSF10A6NK89 507 aa11.59□□□□□ -0.55
SKAP2-207ENST00000490456 C21orf2O43822 256 aa11.59□□□□□ -0.55
SKAP2-207ENST00000490456 RIPK4P57078 832 aa11.59□□□□□ -0.55
SKAP2-207ENST00000490456 NEUROD2Q15784 382 aa11.59□□□□□ -0.55
SKAP2-207ENST00000490456 MCM10Q7L590 875 aa11.59□□□□□ -0.55
SKAP2-207ENST00000490456 DNAJC10Q8IXB1 793 aa11.59□□□□□ -0.55
SKAP2-207ENST00000490456 MICALL2Q8IY33 904 aa11.59□□□□□ -0.55
SKAP2-207ENST00000490456 IL17REQ8NFR9 667 aa11.59□□□□□ -0.55
SKAP2-207ENST00000490456 ZNF622Q969S3 477 aaKnown RBP eCLIP11.59□□□□□ -0.55
SKAP2-207ENST00000490456 SLC52A2Q9HAB3 445 aa11.59□□□□□ -0.55
SKAP2-207ENST00000490456 CCDC85CA6NKD9 419 aa11.58□□□□□ -0.56
SKAP2-207ENST00000490456 HTATSF1O43719 755 aaKnown RBP11.58□□□□□ -0.56
SKAP2-207ENST00000490456 ITGBL1O95965 494 aaPredicted RBP11.58□□□□□ -0.56
SKAP2-207ENST00000490456 CYP19A1P11511 503 aaPredicted RBP11.58□□□□□ -0.56
SKAP2-207ENST00000490456 PDE6BP35913 854 aa11.58□□□□□ -0.56
SKAP2-207ENST00000490456 TMPOP42166 694 aaKnown RBP11.58□□□□□ -0.56
SKAP2-207ENST00000490456 TEFQ10587 303 aa11.58□□□□□ -0.56
SKAP2-207ENST00000490456 DCTN1Q14203 1278 aa11.58□□□□□ -0.56
SKAP2-207ENST00000490456 DEFB115Q30KQ5 88 aa11.58□□□□□ -0.56
SKAP2-207ENST00000490456 SOGA3Q5TF21 947 aa11.58□□□□□ -0.56
SKAP2-207ENST00000490456 ZNF687Q8N1G0 1237 aa11.58□□□□□ -0.56
SKAP2-207ENST00000490456 TAF1DQ9H5J8 278 aaPredicted RBP11.58□□□□□ -0.56
SKAP2-207ENST00000490456 BCL2L12Q9HB09 334 aa11.58□□□□□ -0.56
SKAP2-207ENST00000490456 SLX4Q8IY92 1834 aa11.58□□□□□ -0.56
SKAP2-207ENST00000490456 APAF1O14727 1248 aa11.57□□□□□ -0.56
SKAP2-207ENST00000490456 LMOD3Q0VAK6 560 aa11.57□□□□□ -0.56
SKAP2-207ENST00000490456 BRIP1Q9BX63 1249 aa11.57□□□□□ -0.56
SKAP2-207ENST00000490456 WDR33Q9C0J8 1336 aaKnown RBP11.57□□□□□ -0.56
SKAP2-207ENST00000490456 MRC1P22897 1456 aa11.57□□□□□ -0.56
SKAP2-207ENST00000490456 UBR2Q8IWV8 1755 aa11.56□□□□□ -0.56
SKAP2-207ENST00000490456 CEMIPQ8WUJ3 1361 aa11.56□□□□□ -0.56
SKAP2-207ENST00000490456 TNRC18O15417 2968 aaPredicted RBP11.56□□□□□ -0.56
SKAP2-207ENST00000490456 THUMPD2Q9BTF0 503 aaKnown RBP11.56□□□□□ -0.56
SKAP2-207ENST00000490456 BEGAINQ9BUH8 593 aa11.56□□□□□ -0.56
SKAP2-207ENST00000490456 ZBTB1Q9Y2K1 713 aa11.56□□□□□ -0.56
SKAP2-207ENST00000490456 EAPPQ56P03 285 aaPredicted RBP11.55□□□□□ -0.56
SKAP2-207ENST00000490456 PNMA8AQ86V59 439 aaPredicted RBP11.55□□□□□ -0.56
SKAP2-207ENST00000490456 CNKSR1Q969H4 720 aa11.55□□□□□ -0.56
SKAP2-207ENST00000490456 HACL1Q9UJ83 578 aa11.55□□□□□ -0.56
SKAP2-207ENST00000490456 TRPM7Q96QT4 1865 aa11.55□□□□□ -0.56
SKAP2-207ENST00000490456 A0A087WZG4 1122 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms