RNA–Protein interactions for RNA: ENST00000489944.1

SEMA6C-208, Transcript of semaphorin 6C, humanhuman

TSL 3

Gene SEMA6C, Length 423 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-208ENST00000489944 RBM17Q96I25 401 aaKnown RBP15.43■□□□□ 0.06
SEMA6C-208ENST00000489944 UTP14AQ9BVJ6 771 aaKnown RBP15.43■□□□□ 0.06
SEMA6C-208ENST00000489944 TMX4Q9H1E5 349 aaPredicted RBP15.43■□□□□ 0.06
SEMA6C-208ENST00000489944 TIAM2Q8IVF5 1701 aa15.43■□□□□ 0.06
SEMA6C-208ENST00000489944 WDR90Q96KV7 1748 aa15.43■□□□□ 0.06
SEMA6C-208ENST00000489944 UBN2Q6ZU65 1347 aa15.43■□□□□ 0.06
SEMA6C-208ENST00000489944 HSP90B1P14625 803 aaKnown RBP15.42■□□□□ 0.06
SEMA6C-208ENST00000489944 TCIRG1Q13488 830 aa15.42■□□□□ 0.06
SEMA6C-208ENST00000489944 SUSD4Q5VX71 490 aa15.42■□□□□ 0.06
SEMA6C-208ENST00000489944 COPS6Q7L5N1 327 aa15.42■□□□□ 0.06
SEMA6C-208ENST00000489944 PLBD2Q8NHP8 589 aa15.42■□□□□ 0.06
SEMA6C-208ENST00000489944 RRAGCQ9HB90 399 aa15.42■□□□□ 0.06
SEMA6C-208ENST00000489944 IQCA1LA6NCM1 817 aa15.41■□□□□ 0.06
SEMA6C-208ENST00000489944 APAF1O14727 1248 aa15.41■□□□□ 0.06
SEMA6C-208ENST00000489944 PRELPP51888 382 aa15.41■□□□□ 0.06
SEMA6C-208ENST00000489944 TMC4Q7Z404 712 aa15.41■□□□□ 0.06
SEMA6C-208ENST00000489944 LAS1LQ9Y4W2 734 aaKnown RBP15.41■□□□□ 0.06
SEMA6C-208ENST00000489944 CCDC88AQ3V6T2 1871 aa15.41■□□□□ 0.06
SEMA6C-208ENST00000489944 ABCC12Q96J65 1359 aa15.4■□□□□ 0.06
SEMA6C-208ENST00000489944 FAM177BA6PVY3 158 aa15.4■□□□□ 0.06
SEMA6C-208ENST00000489944 GPTP24298 496 aa15.4■□□□□ 0.06
SEMA6C-208ENST00000489944 TRIM28Q13263 835 aaKnown RBP15.4■□□□□ 0.06
SEMA6C-208ENST00000489944 XAGE3Q8WTP9 111 aa15.4■□□□□ 0.06
SEMA6C-208ENST00000489944 L3MBTL3Q96JM7 780 aaPredicted RBP15.4■□□□□ 0.06
SEMA6C-208ENST00000489944 ANKRD36CQ5JPF3 1778 aa15.39■□□□□ 0.05
SEMA6C-208ENST00000489944 ZNF316A6NFI3 1004 aaPredicted RBP15.39■□□□□ 0.05
SEMA6C-208ENST00000489944 BBOX1O75936 387 aa15.39■□□□□ 0.05
SEMA6C-208ENST00000489944 DUSP27Q5VZP5 1158 aa15.39■□□□□ 0.05
SEMA6C-208ENST00000489944 ANKRD13DQ6ZTN6 518 aa15.39■□□□□ 0.05
SEMA6C-208ENST00000489944 NLRP10Q86W26 655 aa15.39■□□□□ 0.05
SEMA6C-208ENST00000489944 NUTM1Q86Y26 1132 aa15.39■□□□□ 0.05
SEMA6C-208ENST00000489944 MBIPQ9NS73 344 aa15.39■□□□□ 0.05
SEMA6C-208ENST00000489944 ZNF219Q9P2Y4 722 aaPredicted RBP15.39■□□□□ 0.05
SEMA6C-208ENST00000489944 SH3TC1Q8TE82 1336 aa15.39■□□□□ 0.05
SEMA6C-208ENST00000489944 CEP350Q5VT06 3117 aa15.39■□□□□ 0.05
SEMA6C-208ENST00000489944 SNED1Q8TER0 1413 aa15.38■□□□□ 0.05
SEMA6C-208ENST00000489944 ANP32CO43423 234 aa15.38■□□□□ 0.05
SEMA6C-208ENST00000489944 PROSER3Q2NL68 480 aa15.38■□□□□ 0.05
SEMA6C-208ENST00000489944 SUPT20HQ8NEM7 779 aa15.38■□□□□ 0.05
SEMA6C-208ENST00000489944 CHPF2Q9P2E5 772 aa15.38■□□□□ 0.05
SEMA6C-208ENST00000489944 IL16Q14005 1332 aa15.38■□□□□ 0.05
SEMA6C-208ENST00000489944 IARSP41252 1262 aaKnown RBP15.37■□□□□ 0.05
SEMA6C-208ENST00000489944 JDP2Q8WYK2 163 aa15.37■□□□□ 0.05
SEMA6C-208ENST00000489944 CACNA1SQ13698 1873 aa15.37■□□□□ 0.05
SEMA6C-208ENST00000489944 FZD9O00144 591 aa15.36■□□□□ 0.05
SEMA6C-208ENST00000489944 AIMP1Q12904 312 aaKnown RBP15.36■□□□□ 0.05
SEMA6C-208ENST00000489944 CCDC30Q5VVM6 783 aa15.36■□□□□ 0.05
SEMA6C-208ENST00000489944 ISCA1Q9BUE6 129 aa15.36■□□□□ 0.05
SEMA6C-208ENST00000489944 TRMT112Q9UI30 125 aaKnown RBP15.36■□□□□ 0.05
SEMA6C-208ENST00000489944 ATP6V0A2Q9Y487 856 aa15.36■□□□□ 0.05
SEMA6C-208ENST00000489944 SCN4AP35499 1836 aa15.36■□□□□ 0.05
SEMA6C-208ENST00000489944 PPEF1O14829 653 aaPredicted RBP15.35■□□□□ 0.05
SEMA6C-208ENST00000489944 DDX58O95786 925 aaKnown RBP15.35■□□□□ 0.05
SEMA6C-208ENST00000489944 GOLGA2Q08379 1002 aa15.35■□□□□ 0.05
SEMA6C-208ENST00000489944 SYNE4Q8N205 404 aa15.35■□□□□ 0.05
SEMA6C-208ENST00000489944 POTECB2RU33 542 aa15.34■□□□□ 0.05
SEMA6C-208ENST00000489944 ANXA1P04083 346 aa15.34■□□□□ 0.05
SEMA6C-208ENST00000489944 KRT24Q2M2I5 525 aa15.34■□□□□ 0.05
SEMA6C-208ENST00000489944 DDX46Q7L014 1031 aaKnown RBP15.34■□□□□ 0.05
SEMA6C-208ENST00000489944 PNMA8AQ86V59 439 aaPredicted RBP15.34■□□□□ 0.05
SEMA6C-208ENST00000489944 GPC2Q8N158 579 aa15.34■□□□□ 0.05
SEMA6C-208ENST00000489944 SF3B3Q15393 1217 aaKnown RBP15.33■□□□□ 0.04
SEMA6C-208ENST00000489944 SP8Q8IXZ3 490 aa15.33■□□□□ 0.04
SEMA6C-208ENST00000489944 NECTIN2Q92692 538 aa15.33■□□□□ 0.04
SEMA6C-208ENST00000489944 RTFDC1Q9BY42 306 aaPredicted RBP15.33■□□□□ 0.04
SEMA6C-208ENST00000489944 ZNF277Q9NRM2 450 aaPredicted RBP15.33■□□□□ 0.04
SEMA6C-208ENST00000489944 DDNO94850 711 aaPredicted RBP15.32■□□□□ 0.04
SEMA6C-208ENST00000489944 EIF6P56537 245 aaKnown RBP15.32■□□□□ 0.04
SEMA6C-208ENST00000489944 GRAPQ13588 217 aa15.32■□□□□ 0.04
SEMA6C-208ENST00000489944 RIC3Q7Z5B4 369 aa15.32■□□□□ 0.04
SEMA6C-208ENST00000489944 LDHDQ86WU2 507 aa15.32■□□□□ 0.04
SEMA6C-208ENST00000489944 WWC1Q8IX03 1113 aa15.32■□□□□ 0.04
SEMA6C-208ENST00000489944 DNAJC5GQ8N7S2 189 aa15.32■□□□□ 0.04
SEMA6C-208ENST00000489944 CCDC191Q8NCU4 936 aa15.32■□□□□ 0.04
SEMA6C-208ENST00000489944 GRAPLQ8TC17 118 aaPredicted RBP15.32■□□□□ 0.04
SEMA6C-208ENST00000489944 CHADLQ6NUI6 762 aa15.31■□□□□ 0.04
SEMA6C-208ENST00000489944 WDR63Q8IWG1 891 aa15.31■□□□□ 0.04
SEMA6C-208ENST00000489944 STK31Q9BXU1 1019 aa15.31■□□□□ 0.04
SEMA6C-208ENST00000489944 MRS2Q9HD23 443 aa15.31■□□□□ 0.04
SEMA6C-208ENST00000489944 HACL1Q9UJ83 578 aa15.31■□□□□ 0.04
SEMA6C-208ENST00000489944 ABCC4O15439 1325 aa15.3■□□□□ 0.04
SEMA6C-208ENST00000489944 LARGE2Q8N3Y3 721 aa15.3■□□□□ 0.04
SEMA6C-208ENST00000489944 ZBTB38Q8NAP3 1195 aaPredicted RBP15.3■□□□□ 0.04
SEMA6C-208ENST00000489944 TAF1DQ9H5J8 278 aaPredicted RBP15.3■□□□□ 0.04
SEMA6C-208ENST00000489944 CDHR2Q9BYE9 1310 aa15.29■□□□□ 0.04
SEMA6C-208ENST00000489944 JMYQ8N9B5 988 aa15.29■□□□□ 0.04
SEMA6C-208ENST00000489944 KLRG1Q96E93 195 aa15.29■□□□□ 0.04
SEMA6C-208ENST00000489944 HCLS1P14317 486 aaPredicted RBP15.28■□□□□ 0.04
SEMA6C-208ENST00000489944 DPP8Q6V1X1 898 aaPredicted RBP15.28■□□□□ 0.04
SEMA6C-208ENST00000489944 C3orf67Q6ZVT6 689 aa15.28■□□□□ 0.04
SEMA6C-208ENST00000489944 NIM1KQ8IY84 436 aa15.28■□□□□ 0.04
SEMA6C-208ENST00000489944 MPNDQ8N594 471 aa15.28■□□□□ 0.04
SEMA6C-208ENST00000489944 C8orf58Q8NAV2 365 aa15.28■□□□□ 0.04
SEMA6C-208ENST00000489944 PCCAP05165 728 aaPredicted RBP15.27■□□□□ 0.04
SEMA6C-208ENST00000489944 LMOD1P29536 600 aaPredicted RBP15.27■□□□□ 0.04
SEMA6C-208ENST00000489944 KIAA2012Q0VF49 1180 aa15.27■□□□□ 0.04
SEMA6C-208ENST00000489944 OLFM4Q6UX06 510 aa15.27■□□□□ 0.04
SEMA6C-208ENST00000489944 METTL22Q9BUU2 404 aaPredicted RBP15.27■□□□□ 0.04
SEMA6C-208ENST00000489944 LAMB2P55268 1798 aa15.26■□□□□ 0.03
SEMA6C-208ENST00000489944 ZNF541Q9H0D2 1346 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms