RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 CARD14Q9BXL6 1004 aa15.84■□□□□ 0.13
HDAC6-233ENST00000489352 PGAP2Q9UHJ9 254 aa15.84■□□□□ 0.13
HDAC6-233ENST00000489352 CUL9Q8IWT3 2517 aa15.83■□□□□ 0.12
HDAC6-233ENST00000489352 USP48Q86UV5 1035 aa15.83■□□□□ 0.12
HDAC6-233ENST00000489352 DZIP3Q86Y13 1208 aaKnown RBP15.83■□□□□ 0.12
HDAC6-233ENST00000489352 BCL2L13Q9BXK5 485 aa15.83■□□□□ 0.12
HDAC6-233ENST00000489352 TMX4Q9H1E5 349 aaPredicted RBP15.83■□□□□ 0.12
HDAC6-233ENST00000489352 ZNF652Q9Y2D9 606 aa15.83■□□□□ 0.12
HDAC6-233ENST00000489352 POLR2AP24928 1970 aaKnown RBP15.82■□□□□ 0.12
HDAC6-233ENST00000489352 KLRG2A4D1S0 409 aaPredicted RBP15.82■□□□□ 0.12
HDAC6-233ENST00000489352 CAMTA2O94983 1202 aa15.82■□□□□ 0.12
HDAC6-233ENST00000489352 SULT6B1Q6IMI4 303 aa15.82■□□□□ 0.12
HDAC6-233ENST00000489352 FBXO46Q6PJ61 603 aaPredicted RBP15.82■□□□□ 0.12
HDAC6-233ENST00000489352 AEBP1Q8IUX7 1158 aa15.82■□□□□ 0.12
HDAC6-233ENST00000489352 CSRNP1Q96S65 589 aa15.82■□□□□ 0.12
HDAC6-233ENST00000489352 GBA2Q9HCG7 927 aaPredicted RBP15.82■□□□□ 0.12
HDAC6-233ENST00000489352 FAM177BA6PVY3 158 aa15.81■□□□□ 0.12
HDAC6-233ENST00000489352 RNMTO43148 476 aaKnown RBP15.81■□□□□ 0.12
HDAC6-233ENST00000489352 COL4A5P29400 1685 aa15.81■□□□□ 0.12
HDAC6-233ENST00000489352 UBR2Q8IWV8 1755 aa15.81■□□□□ 0.12
HDAC6-233ENST00000489352 SZT2Q5T011 3432 aa15.8■□□□□ 0.12
HDAC6-233ENST00000489352 PPIP5K2O43314 1243 aa15.8■□□□□ 0.12
HDAC6-233ENST00000489352 GMPSP49915 693 aaPredicted RBP15.8■□□□□ 0.12
HDAC6-233ENST00000489352 ZNF296Q8WUU4 475 aaPredicted RBP15.8■□□□□ 0.12
HDAC6-233ENST00000489352 COLQQ9Y215 455 aaPredicted RBP15.8■□□□□ 0.12
HDAC6-233ENST00000489352 MKI67P46013 3256 aaKnown RBP15.8■□□□□ 0.12
HDAC6-233ENST00000489352 A0A0C4DFX4 3053 aa15.8■□□□□ 0.12
HDAC6-233ENST00000489352 H7C1D1 291 aa15.79■□□□□ 0.12
HDAC6-233ENST00000489352 CLEC4GQ6UXB4 293 aa15.79■□□□□ 0.12
HDAC6-233ENST00000489352 NPC1L1Q9UHC9 1359 aa15.78■□□□□ 0.12
HDAC6-233ENST00000489352 RPGRQ92834 1020 aaKnown RBP15.78■□□□□ 0.12
HDAC6-233ENST00000489352 TRIOBPQ9H2D6 2365 aa15.77■□□□□ 0.12
HDAC6-233ENST00000489352 CDHR2Q9BYE9 1310 aa15.77■□□□□ 0.12
HDAC6-233ENST00000489352 TCERG1O14776 1098 aaKnown RBP15.77■□□□□ 0.12
HDAC6-233ENST00000489352 A1BGP04217 495 aa15.77■□□□□ 0.12
HDAC6-233ENST00000489352 CXCL9Q07325 125 aa15.77■□□□□ 0.12
HDAC6-233ENST00000489352 TNIP1Q15025 636 aa15.77■□□□□ 0.12
HDAC6-233ENST00000489352 INTS3Q68E01 1043 aaKnown RBP15.77■□□□□ 0.12
HDAC6-233ENST00000489352 KRT26Q7Z3Y9 468 aa15.77■□□□□ 0.12
HDAC6-233ENST00000489352 ZNRF3Q9ULT6 936 aa15.77■□□□□ 0.12
HDAC6-233ENST00000489352 NIP7Q9Y221 180 aaKnown RBP eCLIP15.77■□□□□ 0.12
HDAC6-233ENST00000489352 MRC1P22897 1456 aa15.77■□□□□ 0.11
HDAC6-233ENST00000489352 CEP290O15078 2479 aa15.76■□□□□ 0.11
HDAC6-233ENST00000489352 TBC1D8O95759 1140 aa15.76■□□□□ 0.11
HDAC6-233ENST00000489352 SLC10A3P09131 477 aa15.76■□□□□ 0.11
HDAC6-233ENST00000489352 HIRAP54198 1017 aaPredicted RBP15.76■□□□□ 0.11
HDAC6-233ENST00000489352 AOC3Q16853 763 aa15.76■□□□□ 0.11
HDAC6-233ENST00000489352 TRPM4Q8TD43 1214 aa15.75■□□□□ 0.11
HDAC6-233ENST00000489352 DCPSQ96C86 337 aaKnown RBP15.75■□□□□ 0.11
HDAC6-233ENST00000489352 VPS33BQ9H267 617 aa15.75■□□□□ 0.11
HDAC6-233ENST00000489352 CNOT7Q9UIV1 285 aaKnown RBP15.75■□□□□ 0.11
HDAC6-233ENST00000489352 HEG1Q9ULI3 1381 aa15.75■□□□□ 0.11
HDAC6-233ENST00000489352 ZNF496Q96IT1 587 aaPredicted RBP15.74■□□□□ 0.11
HDAC6-233ENST00000489352 PAPPA2Q9BXP8 1791 aa15.73■□□□□ 0.11
HDAC6-233ENST00000489352 DLK2Q6UY11 383 aa15.73■□□□□ 0.11
HDAC6-233ENST00000489352 SUPT20HQ8NEM7 779 aa15.73■□□□□ 0.11
HDAC6-233ENST00000489352 SNED1Q8TER0 1413 aa15.73■□□□□ 0.11
HDAC6-233ENST00000489352 KIAA0100Q14667 2235 aaKnown RBP15.72■□□□□ 0.11
HDAC6-233ENST00000489352 POTEFA5A3E0 1075 aa15.72■□□□□ 0.11
HDAC6-233ENST00000489352 GPR25O00155 361 aa15.72■□□□□ 0.11
HDAC6-233ENST00000489352 PPEF1O14829 653 aaPredicted RBP15.72■□□□□ 0.11
HDAC6-233ENST00000489352 RAD17O75943 681 aa15.72■□□□□ 0.11
HDAC6-233ENST00000489352 TEFQ10587 303 aa15.72■□□□□ 0.11
HDAC6-233ENST00000489352 ZNF790Q6PG37 636 aa15.72■□□□□ 0.11
HDAC6-233ENST00000489352 RBM17Q96I25 401 aaKnown RBP15.72■□□□□ 0.11
HDAC6-233ENST00000489352 FMNL2Q96PY5 1086 aa15.72■□□□□ 0.11
HDAC6-233ENST00000489352 FKTNO75072 461 aa15.71■□□□□ 0.11
HDAC6-233ENST00000489352 NYXQ9GZU5 481 aa15.71■□□□□ 0.11
HDAC6-233ENST00000489352 RBBP6Q7Z6E9 1792 aaKnown RBP15.7■□□□□ 0.1
HDAC6-233ENST00000489352 CRY2Q49AN0 593 aa15.7■□□□□ 0.1
HDAC6-233ENST00000489352 MICALL2Q8IY33 904 aa15.7■□□□□ 0.1
HDAC6-233ENST00000489352 ADM5C9JUS6 153 aa15.69■□□□□ 0.1
HDAC6-233ENST00000489352 SULF1Q8IWU6 871 aa15.69■□□□□ 0.1
HDAC6-233ENST00000489352 PIP4K2AP48426 406 aaPredicted RBP15.68■□□□□ 0.1
HDAC6-233ENST00000489352 MNX1P50219 401 aaPredicted RBP15.68■□□□□ 0.1
HDAC6-233ENST00000489352 TBC1D10BQ4KMP7 808 aaPredicted RBP15.68■□□□□ 0.1
HDAC6-233ENST00000489352 NOM1Q5C9Z4 860 aaKnown RBP15.68■□□□□ 0.1
HDAC6-233ENST00000489352 RBM26Q5T8P6 1007 aaKnown RBP15.68■□□□□ 0.1
HDAC6-233ENST00000489352 SAMD7Q7Z3H4 446 aa15.68■□□□□ 0.1
HDAC6-233ENST00000489352 RASAL3Q86YV0 1011 aa15.68■□□□□ 0.1
HDAC6-233ENST00000489352 CENPFP49454 3210 aa15.68■□□□□ 0.1
HDAC6-233ENST00000489352 HOXA10P31260 410 aaPredicted RBP15.67■□□□□ 0.1
HDAC6-233ENST00000489352 NUTM1Q86Y26 1132 aa15.67■□□□□ 0.1
HDAC6-233ENST00000489352 CRAMP1Q96RY5 1269 aa15.67■□□□□ 0.1
HDAC6-233ENST00000489352 COL6A3P12111 3177 aa15.67■□□□□ 0.1
HDAC6-233ENST00000489352 SHTN1A0MZ66 631 aa15.66■□□□□ 0.1
HDAC6-233ENST00000489352 EN2P19622 333 aaPredicted RBP15.66■□□□□ 0.1
HDAC6-233ENST00000489352 DPP8Q6V1X1 898 aaPredicted RBP15.66■□□□□ 0.1
HDAC6-233ENST00000489352 TMEM106CQ9BVX2 250 aa15.66■□□□□ 0.1
HDAC6-233ENST00000489352 TRIM17Q9Y577 477 aa15.66■□□□□ 0.1
HDAC6-233ENST00000489352 KIF7Q2M1P5 1343 aa15.66■□□□□ 0.1
HDAC6-233ENST00000489352 PRAMEF22A3QJZ6 481 aa15.65■□□□□ 0.1
HDAC6-233ENST00000489352 RGL2O15211 777 aa15.65■□□□□ 0.1
HDAC6-233ENST00000489352 MTHFSDQ2M296 383 aaKnown RBP15.65■□□□□ 0.1
HDAC6-233ENST00000489352 HMOX1P09601 288 aa15.64■□□□□ 0.09
HDAC6-233ENST00000489352 CHRDL2Q6WN34 429 aa15.64■□□□□ 0.09
HDAC6-233ENST00000489352 DPF2Q92785 391 aa15.64■□□□□ 0.09
HDAC6-233ENST00000489352 POLR3GLQ9BT43 218 aa15.64■□□□□ 0.09
HDAC6-233ENST00000489352 H0YGN5 161 aa15.63■□□□□ 0.09
HDAC6-233ENST00000489352 IL13P35225 146 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms