RNA–Protein interactions for RNA: ENST00000489295.5

LRRFIP1-213, Transcript of LRR binding FLII interacting protein 1, human

TSL 5

Gene LRRFIP1, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRFIP1-213	ENST00000489295	PNPLA7	Q6ZV29	1317 aa		13.65	□□□□□ -0.22
LRRFIP1-213	ENST00000489295	COL24A1	Q17RW2	1714 aa		13.65	□□□□□ -0.22
LRRFIP1-213	ENST00000489295	ARX	Q96QS3	562 aa		13.65	□□□□□ -0.22
LRRFIP1-213	ENST00000489295	MYD88	Q99836	296 aa		13.65	□□□□□ -0.22
LRRFIP1-213	ENST00000489295	ISCA1	Q9BUE6	129 aa		13.65	□□□□□ -0.22
LRRFIP1-213	ENST00000489295	RNF39	Q9H2S5	420 aa		13.65	□□□□□ -0.22
LRRFIP1-213	ENST00000489295	NEURL1B	A8MQ27	555 aa		13.64	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	IGKV5-2	P06315	115 aa		13.64	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	FAM161A	Q3B820	660 aa		13.64	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	PARP10	Q53GL7	1025 aa		13.64	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	RTL5	Q5HYW3	569 aa	Predicted RBP	13.64	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	USPL1	Q5W0Q7	1092 aa		13.64	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	CCDC191	Q8NCU4	936 aa		13.64	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	COG6	Q9Y2V7	657 aa		13.64	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	AFDN	P55196	1824 aa	Known RBP	13.64	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	HLF	Q16534	295 aa		13.63	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	ZNF34	Q8IZ26	560 aa		13.63	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	BCL2L12	Q9HB09	334 aa		13.63	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	FOXD4L1	Q9NU39	408 aa		13.63	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	CWC25	Q9NXE8	425 aa	Predicted RBP	13.63	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	GNAI3	P08754	354 aa		13.62	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	GCKR	Q14397	625 aa		13.62	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	COL23A1	Q86Y22	540 aa	Predicted RBP	13.62	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	SRP68	Q9UHB9	627 aa	Known RBP	13.62	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	HDAC5	Q9UQL6	1122 aa		13.62	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	UTY	O14607	1347 aa		13.62	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	CARMIL3	Q8ND23	1372 aa		13.61	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	GYS1	P13807	737 aa		13.61	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	CWF19L2	Q2TBE0	894 aa	Known RBP	13.61	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	NLRP10	Q86W26	655 aa		13.61	□□□□□ -0.23
LRRFIP1-213	ENST00000489295		U3KPZ7	1027 aa	Predicted RBP	13.61	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	ATP5J2-PTCD1	G3V325	749 aa		13.6	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	GRM8	O00222	908 aa		13.6	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	ZBTB7B	O15156	539 aa	Predicted RBP	13.6	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	SMIM5	Q71RC9	77 aa		13.6	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	CASZ1	Q86V15	1759 aa		13.6	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	UBN2	Q6ZU65	1347 aa		13.6	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	LAMB2	P55268	1798 aa		13.59	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	PCCA	P05165	728 aa	Predicted RBP	13.59	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	UBTFL1	P0CB47	393 aa	Predicted RBP	13.59	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	GPT	P24298	496 aa		13.59	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	PPP1R42	Q7Z4L9	355 aa		13.59	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	NLGN1	Q8N2Q7	840 aa		13.59	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	SLC16A10	Q8TF71	515 aa		13.59	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	MEIS3	Q99687	375 aa		13.59	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	USP44	Q9H0E7	712 aa		13.59	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	ZBTB40	Q9NUA8	1239 aa		13.59	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.59	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	CDHR2	Q9BYE9	1310 aa		13.59	□□□□□ -0.23
LRRFIP1-213	ENST00000489295	RIC1	Q4ADV7	1423 aa		13.58	□□□□□ -0.24
LRRFIP1-213	ENST00000489295		H7C1W4	665 aa		13.58	□□□□□ -0.24
LRRFIP1-213	ENST00000489295	HSP90B1	P14625	803 aa	Known RBP	13.58	□□□□□ -0.24
LRRFIP1-213	ENST00000489295	TBC1D9B	Q66K14	1250 aa		13.58	□□□□□ -0.24
LRRFIP1-213	ENST00000489295	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.58	□□□□□ -0.24
LRRFIP1-213	ENST00000489295	SETDB2	Q96T68	719 aa		13.58	□□□□□ -0.24
LRRFIP1-213	ENST00000489295	NYX	Q9GZU5	481 aa		13.58	□□□□□ -0.24
LRRFIP1-213	ENST00000489295	NTSR2	O95665	410 aa		13.57	□□□□□ -0.24
LRRFIP1-213	ENST00000489295	GNAI2	P04899	355 aa		13.57	□□□□□ -0.24
LRRFIP1-213	ENST00000489295	NFIX	Q14938	502 aa		13.57	□□□□□ -0.24
LRRFIP1-213	ENST00000489295	UTP14A	Q9BVJ6	771 aa	Known RBP	13.57	□□□□□ -0.24
LRRFIP1-213	ENST00000489295	SH3TC1	Q8TE82	1336 aa		13.57	□□□□□ -0.24
LRRFIP1-213	ENST00000489295	NRXN2	Q9P2S2	1712 aa		13.56	□□□□□ -0.24
LRRFIP1-213	ENST00000489295	TM4SF1	P30408	202 aa		13.56	□□□□□ -0.24
LRRFIP1-213	ENST00000489295	CASP7	P55210	303 aa		13.56	□□□□□ -0.24
LRRFIP1-213	ENST00000489295	SUSD4	Q5VX71	490 aa		13.56	□□□□□ -0.24
LRRFIP1-213	ENST00000489295	UBE3B	Q7Z3V4	1068 aa		13.56	□□□□□ -0.24
LRRFIP1-213	ENST00000489295	TRMT112	Q9UI30	125 aa	Known RBP	13.56	□□□□□ -0.24
LRRFIP1-213	ENST00000489295	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.55	□□□□□ -0.24
LRRFIP1-213	ENST00000489295	C8orf34	Q49A92	452 aa		13.55	□□□□□ -0.24
LRRFIP1-213	ENST00000489295	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.55	□□□□□ -0.24
LRRFIP1-213	ENST00000489295	PLA2G12B	Q9BX93	195 aa		13.55	□□□□□ -0.24
LRRFIP1-213	ENST00000489295	POLRMT	O00411	1230 aa	Known RBP	13.54	□□□□□ -0.24
LRRFIP1-213	ENST00000489295	DEK	P35659	375 aa	Known RBP	13.54	□□□□□ -0.24
LRRFIP1-213	ENST00000489295	NBR1	Q14596	966 aa		13.54	□□□□□ -0.24
LRRFIP1-213	ENST00000489295	TPTE2	Q6XPS3	522 aa		13.54	□□□□□ -0.24
LRRFIP1-213	ENST00000489295	BICDL1	Q6ZP65	573 aa		13.54	□□□□□ -0.24
LRRFIP1-213	ENST00000489295	DAXX	Q9UER7	740 aa	Predicted RBP	13.54	□□□□□ -0.24
LRRFIP1-213	ENST00000489295	DDR1	Q08345	913 aa		13.53	□□□□□ -0.24
LRRFIP1-213	ENST00000489295	MTX1	Q13505	466 aa		13.53	□□□□□ -0.24
LRRFIP1-213	ENST00000489295	R3HDM1	Q15032	1099 aa	Known RBP	13.53	□□□□□ -0.24
LRRFIP1-213	ENST00000489295	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.53	□□□□□ -0.24
LRRFIP1-213	ENST00000489295	CNBD1	Q8NA66	436 aa		13.53	□□□□□ -0.24
LRRFIP1-213	ENST00000489295	SUCLG2	Q96I99	432 aa		13.53	□□□□□ -0.24
LRRFIP1-213	ENST00000489295	LRRFIP2	Q9Y608	721 aa	Known RBP	13.53	□□□□□ -0.24
LRRFIP1-213	ENST00000489295	DDX60	Q8IY21	1712 aa	Known RBP	13.53	□□□□□ -0.24
LRRFIP1-213	ENST00000489295	IRS4	O14654	1257 aa	Predicted RBP	13.52	□□□□□ -0.25
LRRFIP1-213	ENST00000489295	MMP10	P09238	476 aa		13.52	□□□□□ -0.25
LRRFIP1-213	ENST00000489295	RABL6	Q3YEC7	729 aa	Predicted RBP	13.52	□□□□□ -0.25
LRRFIP1-213	ENST00000489295	FAM89A	Q96GI7	184 aa		13.52	□□□□□ -0.25
LRRFIP1-213	ENST00000489295	MTFR1L	Q9H019	292 aa		13.52	□□□□□ -0.25
LRRFIP1-213	ENST00000489295	PARP3	Q9Y6F1	533 aa		13.52	□□□□□ -0.25
LRRFIP1-213	ENST00000489295	ABCC12	Q96J65	1359 aa		13.52	□□□□□ -0.25
LRRFIP1-213	ENST00000489295	MYH3	P11055	1940 aa		13.51	□□□□□ -0.25
LRRFIP1-213	ENST00000489295	RTL9	Q8NET4	1388 aa		13.51	□□□□□ -0.25
LRRFIP1-213	ENST00000489295	PDE8A	O60658	829 aa		13.51	□□□□□ -0.25
LRRFIP1-213	ENST00000489295	HMMR	O75330	724 aa		13.51	□□□□□ -0.25
LRRFIP1-213	ENST00000489295	SERPINB2	P05120	415 aa		13.51	□□□□□ -0.25
LRRFIP1-213	ENST00000489295	GTF2E1	P29083	439 aa	Predicted RBP	13.51	□□□□□ -0.25
LRRFIP1-213	ENST00000489295	RGS3	P49796	1198 aa		13.51	□□□□□ -0.25

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