RNA–Protein interactions for RNA: ENST00000488971.1

KDM3A-213, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 975 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-213ENST00000488971 USP17L11C9JVI0 530 aa6.59□□□□□ -1.35
KDM3A-213ENST00000488971 USP17L21D6R901 530 aa6.59□□□□□ -1.35
KDM3A-213ENST00000488971 USP17L18D6R9N7 530 aa6.59□□□□□ -1.35
KDM3A-213ENST00000488971 USP17L22D6RA61 530 aa6.59□□□□□ -1.35
KDM3A-213ENST00000488971 USP17L17D6RBQ6 530 aa6.59□□□□□ -1.35
KDM3A-213ENST00000488971 USP17L19D6RCP7 530 aa6.59□□□□□ -1.35
KDM3A-213ENST00000488971 USP17L20D6RJB6 530 aa6.59□□□□□ -1.35
KDM3A-213ENST00000488971 SPATA31C1P0DKV0 1188 aa6.59□□□□□ -1.35
KDM3A-213ENST00000488971 USP17L24Q0WX57 530 aa6.59□□□□□ -1.35
KDM3A-213ENST00000488971 PTK7Q13308 1070 aa6.59□□□□□ -1.35
KDM3A-213ENST00000488971 CRTC2Q53ET0 693 aaPredicted RBP6.59□□□□□ -1.35
KDM3A-213ENST00000488971 PRRT3Q5FWE3 981 aa6.59□□□□□ -1.35
KDM3A-213ENST00000488971 TRIM50Q86XT4 487 aa6.59□□□□□ -1.35
KDM3A-213ENST00000488971 RHPN1Q8TCX5 695 aa6.59□□□□□ -1.35
KDM3A-213ENST00000488971 SEMA6BQ9H3T3 888 aa6.59□□□□□ -1.35
KDM3A-213ENST00000488971 MKRN1Q9UHC7 482 aaKnown RBP6.59□□□□□ -1.35
KDM3A-213ENST00000488971 CHMP3Q9Y3E7 222 aa6.59□□□□□ -1.35
KDM3A-213ENST00000488971 EML1O00423 815 aa6.58□□□□□ -1.36
KDM3A-213ENST00000488971 SIN3BO75182 1162 aa6.58□□□□□ -1.36
KDM3A-213ENST00000488971 APBA3O96018 575 aa6.58□□□□□ -1.36
KDM3A-213ENST00000488971 SSFA2P28290 1259 aa6.58□□□□□ -1.36
KDM3A-213ENST00000488971 FAM69CQ0P6D2 419 aa6.58□□□□□ -1.36
KDM3A-213ENST00000488971 TPCN2Q8NHX9 752 aa6.58□□□□□ -1.36
KDM3A-213ENST00000488971 GPC6Q9Y625 555 aaPredicted RBP6.58□□□□□ -1.36
KDM3A-213ENST00000488971 ARID4AP29374 1257 aaPredicted RBP6.57□□□□□ -1.36
KDM3A-213ENST00000488971 ATP1A2P50993 1020 aa6.57□□□□□ -1.36
KDM3A-213ENST00000488971 SFSWAPQ12872 951 aaKnown RBP6.57□□□□□ -1.36
KDM3A-213ENST00000488971 NEUROD1Q13562 356 aa6.57□□□□□ -1.36
KDM3A-213ENST00000488971 LARP1Q6PKG0 1096 aaKnown RBP6.57□□□□□ -1.36
KDM3A-213ENST00000488971 CLP1Q92989 425 aaKnown RBP6.57□□□□□ -1.36
KDM3A-213ENST00000488971 M0R082 166 aa6.56□□□□□ -1.36
KDM3A-213ENST00000488971 RASA1P20936 1047 aa6.56□□□□□ -1.36
KDM3A-213ENST00000488971 EPHA4P54764 986 aa6.56□□□□□ -1.36
KDM3A-213ENST00000488971 SH3PXD2AQ5TCZ1 1133 aa6.56□□□□□ -1.36
KDM3A-213ENST00000488971 ZNF417Q8TAU3 575 aa6.56□□□□□ -1.36
KDM3A-213ENST00000488971 FAM200AQ8TCP9 573 aa6.56□□□□□ -1.36
KDM3A-213ENST00000488971 CEP63Q96MT8 703 aa6.56□□□□□ -1.36
KDM3A-213ENST00000488971 ZNF587Q96SQ5 575 aaPredicted RBP6.56□□□□□ -1.36
KDM3A-213ENST00000488971 SLC30A3Q99726 388 aa6.56□□□□□ -1.36
KDM3A-213ENST00000488971 SLAIN2Q9P270 581 aa6.56□□□□□ -1.36
KDM3A-213ENST00000488971 HCN4Q9Y3Q4 1203 aa6.56□□□□□ -1.36
KDM3A-213ENST00000488971 ADARB2-AS1A8MUL3 147 aa6.55□□□□□ -1.36
KDM3A-213ENST00000488971 PSMA6P60900 246 aaKnown RBP6.55□□□□□ -1.36
KDM3A-213ENST00000488971 SPEM2Q0P670 501 aa6.55□□□□□ -1.36
KDM3A-213ENST00000488971 SWI5Q1ZZU3 235 aa6.55□□□□□ -1.36
KDM3A-213ENST00000488971 CCDC102BQ68D86 513 aa6.55□□□□□ -1.36
KDM3A-213ENST00000488971 ANKMY2Q8IV38 441 aa6.55□□□□□ -1.36
KDM3A-213ENST00000488971 BRD7Q9NPI1 651 aa6.55□□□□□ -1.36
KDM3A-213ENST00000488971 ANKIB1Q9P2G1 1089 aa6.55□□□□□ -1.36
KDM3A-213ENST00000488971 RBM19Q9Y4C8 960 aaKnown RBP6.55□□□□□ -1.36
KDM3A-213ENST00000488971 SFI1A8K8P3 1242 aa6.54□□□□□ -1.36
KDM3A-213ENST00000488971 FAM229AH3BQW9 127 aa6.54□□□□□ -1.36
KDM3A-213ENST00000488971 ERCC3P19447 782 aa6.54□□□□□ -1.36
KDM3A-213ENST00000488971 TRIM28Q13263 835 aaKnown RBP6.54□□□□□ -1.36
KDM3A-213ENST00000488971 RAB44Q7Z6P3 723 aaPredicted RBP6.54□□□□□ -1.36
KDM3A-213ENST00000488971 HSH2DQ96JZ2 352 aa6.54□□□□□ -1.36
KDM3A-213ENST00000488971 PHACTR1Q9C0D0 580 aa6.54□□□□□ -1.36
KDM3A-213ENST00000488971 TSPAN10Q9H1Z9 355 aaPredicted RBP6.54□□□□□ -1.36
KDM3A-213ENST00000488971 RBM47A0AV96 593 aaKnown RBP6.53□□□□□ -1.36
KDM3A-213ENST00000488971 ZBTB7BO15156 539 aaPredicted RBP6.53□□□□□ -1.36
KDM3A-213ENST00000488971 ADH7P40394 386 aa6.53□□□□□ -1.36
KDM3A-213ENST00000488971 ZMYM1Q5SVZ6 1142 aa6.53□□□□□ -1.36
KDM3A-213ENST00000488971 C1orf53Q5VUE5 145 aa6.53□□□□□ -1.36
KDM3A-213ENST00000488971 DNAJC14Q6Y2X3 702 aaPredicted RBP6.53□□□□□ -1.36
KDM3A-213ENST00000488971 OGFOD1Q8N543 542 aa6.53□□□□□ -1.36
KDM3A-213ENST00000488971 C7orf43Q8WVR3 580 aa6.53□□□□□ -1.36
KDM3A-213ENST00000488971 TNFRSF25Q93038 417 aa6.53□□□□□ -1.36
KDM3A-213ENST00000488971 MDFIQ99750 246 aa6.53□□□□□ -1.36
KDM3A-213ENST00000488971 KIAA1024Q9UPX6 916 aa6.53□□□□□ -1.36
KDM3A-213ENST00000488971 KCNH4Q9UQ05 1017 aa6.53□□□□□ -1.36
KDM3A-213ENST00000488971 SOWAHDA6NJG2 315 aa6.52□□□□□ -1.37
KDM3A-213ENST00000488971 PPP1R12BO60237 982 aaPredicted RBP6.52□□□□□ -1.37
KDM3A-213ENST00000488971 ALBP02768 609 aa6.52□□□□□ -1.37
KDM3A-213ENST00000488971 ATP2B4P23634 1241 aa6.52□□□□□ -1.37
KDM3A-213ENST00000488971 CLDN10P78369 228 aa6.52□□□□□ -1.37
KDM3A-213ENST00000488971 TBC1D8BQ0IIM8 1120 aa6.52□□□□□ -1.37
KDM3A-213ENST00000488971 C8orf86Q6ZUL3 223 aa6.52□□□□□ -1.37
KDM3A-213ENST00000488971 MICALL1Q8N3F8 863 aa6.52□□□□□ -1.37
KDM3A-213ENST00000488971 NACC1Q96RE7 527 aa6.52□□□□□ -1.37
KDM3A-213ENST00000488971 STARD13Q9Y3M8 1113 aa6.52□□□□□ -1.37
KDM3A-213ENST00000488971 DPYDQ12882 1025 aa6.51□□□□□ -1.37
KDM3A-213ENST00000488971 SIX5Q8N196 739 aa6.51□□□□□ -1.37
KDM3A-213ENST00000488971 LARGE2Q8N3Y3 721 aa6.51□□□□□ -1.37
KDM3A-213ENST00000488971 BHMTQ93088 406 aa6.51□□□□□ -1.37
KDM3A-213ENST00000488971 SUSD3Q96L08 255 aa6.51□□□□□ -1.37
KDM3A-213ENST00000488971 IGFLR1Q9H665 355 aa6.51□□□□□ -1.37
KDM3A-213ENST00000488971 PRDM6Q9NQX0 595 aa6.51□□□□□ -1.37
KDM3A-213ENST00000488971 SCO2A0A1W2PP80 73 aa6.5□□□□□ -1.37
KDM3A-213ENST00000488971 DKK1O94907 266 aa6.5□□□□□ -1.37
KDM3A-213ENST00000488971 ITGB7P26010 798 aa6.5□□□□□ -1.37
KDM3A-213ENST00000488971 TRAPPC3LQ5T215 181 aa6.5□□□□□ -1.37
KDM3A-213ENST00000488971 TSEN2Q8NCE0 465 aaKnown RBP6.5□□□□□ -1.37
KDM3A-213ENST00000488971 ZNF280CQ8ND82 737 aa6.5□□□□□ -1.37
KDM3A-213ENST00000488971 ZNF594Q96JF6 807 aaPredicted RBP6.5□□□□□ -1.37
KDM3A-213ENST00000488971 UBE2OQ9C0C9 1292 aaKnown RBP6.5□□□□□ -1.37
KDM3A-213ENST00000488971 TPSG1Q9NRR2 321 aa6.5□□□□□ -1.37
KDM3A-213ENST00000488971 M0R2N6 131 aa6.49□□□□□ -1.37
KDM3A-213ENST00000488971 LILRB5O75023 590 aa6.49□□□□□ -1.37
KDM3A-213ENST00000488971 SERPINB4P48594 390 aa6.49□□□□□ -1.37
KDM3A-213ENST00000488971 HIRAP54198 1017 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms