RNA–Protein interactions for RNA: ENST00000488857.5

VAMP2-204, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene VAMP2, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-204ENST00000488857 TWISTNBQ3B726 338 aaPredicted RBP28.88■■■□□ 2.21
VAMP2-204ENST00000488857 SLC10A5Q5PT55 438 aa28.87■■■□□ 2.21
VAMP2-204ENST00000488857 C9orf131Q5VYM1 1079 aa28.87■■■□□ 2.21
VAMP2-204ENST00000488857 C21orf2O43822 256 aa28.86■■■□□ 2.21
VAMP2-204ENST00000488857 ISCA1Q9BUE6 129 aa28.86■■■□□ 2.21
VAMP2-204ENST00000488857 PHAXQ9H814 394 aaKnown RBP28.86■■■□□ 2.21
VAMP2-204ENST00000488857 ZNF521Q96K83 1311 aa28.86■■■□□ 2.21
VAMP2-204ENST00000488857 SOGA3Q5TF21 947 aa28.85■■■□□ 2.21
VAMP2-204ENST00000488857 C7orf43Q8WVR3 580 aa28.85■■■□□ 2.21
VAMP2-204ENST00000488857 NFKBIEO00221 500 aa28.84■■■□□ 2.21
VAMP2-204ENST00000488857 ALDH1B1P30837 517 aa28.84■■■□□ 2.21
VAMP2-204ENST00000488857 HOXA10P31260 410 aaPredicted RBP28.84■■■□□ 2.21
VAMP2-204ENST00000488857 GOLGA2Q08379 1002 aa28.84■■■□□ 2.21
VAMP2-204ENST00000488857 TRIM28Q13263 835 aaKnown RBP28.84■■■□□ 2.21
VAMP2-204ENST00000488857 CACNA1FO60840 1977 aa28.84■■■□□ 2.21
VAMP2-204ENST00000488857 RASSF7Q02833 373 aa28.83■■■□□ 2.21
VAMP2-204ENST00000488857 SPINK5Q9NQ38 1064 aaPredicted RBP28.83■■■□□ 2.21
VAMP2-204ENST00000488857 LMNB1P20700 586 aa28.82■■■□□ 2.2
VAMP2-204ENST00000488857 STK31Q9BXU1 1019 aa28.82■■■□□ 2.2
VAMP2-204ENST00000488857 RNF181Q9P0P0 153 aa28.82■■■□□ 2.2
VAMP2-204ENST00000488857 LTBP3Q9NS15 1303 aa28.82■■■□□ 2.2
VAMP2-204ENST00000488857 CCDC88AQ3V6T2 1871 aa28.82■■■□□ 2.2
VAMP2-204ENST00000488857 ZC3H4Q9UPT8 1303 aaKnown RBP28.81■■■□□ 2.2
VAMP2-204ENST00000488857 RIC3Q7Z5B4 369 aa28.81■■■□□ 2.2
VAMP2-204ENST00000488857 MYH16Q9H6N6 1097 aa28.81■■■□□ 2.2
VAMP2-204ENST00000488857 GPBP1L1Q9HC44 474 aaPredicted RBP28.81■■■□□ 2.2
VAMP2-204ENST00000488857 TRMT112Q9UI30 125 aaKnown RBP28.81■■■□□ 2.2
VAMP2-204ENST00000488857 LAMB2P55268 1798 aa28.8■■■□□ 2.2
VAMP2-204ENST00000488857 SH3TC1Q8TE82 1336 aa28.8■■■□□ 2.2
VAMP2-204ENST00000488857 PRELPP51888 382 aa28.8■■■□□ 2.2
VAMP2-204ENST00000488857 NLRP3Q96P20 1036 aa28.8■■■□□ 2.2
VAMP2-204ENST00000488857 ZNF219Q9P2Y4 722 aaPredicted RBP28.8■■■□□ 2.2
VAMP2-204ENST00000488857 DDX58O95786 925 aaKnown RBP28.79■■■□□ 2.2
VAMP2-204ENST00000488857 C3orf67Q6ZVT6 689 aa28.79■■■□□ 2.2
VAMP2-204ENST00000488857 RPGRQ92834 1020 aaKnown RBP28.79■■■□□ 2.2
VAMP2-204ENST00000488857 DICER1Q9UPY3 1922 aaKnown RBP28.79■■■□□ 2.2
VAMP2-204ENST00000488857 VAMP4O75379 141 aa28.78■■■□□ 2.2
VAMP2-204ENST00000488857 EXOSC9Q06265 439 aaKnown RBP28.78■■■□□ 2.2
VAMP2-204ENST00000488857 CRAMP1Q96RY5 1269 aa28.78■■■□□ 2.2
VAMP2-204ENST00000488857 DDX60Q8IY21 1712 aaKnown RBP28.77■■■□□ 2.2
VAMP2-204ENST00000488857 ATP5J2-PTCD1G3V325 749 aa28.77■■■□□ 2.2
VAMP2-204ENST00000488857 CCDC93Q567U6 631 aa28.77■■■□□ 2.2
VAMP2-204ENST00000488857 TAOK3Q9H2K8 898 aa28.77■■■□□ 2.2
VAMP2-204ENST00000488857 SYNE4Q8N205 404 aa28.76■■■□□ 2.19
VAMP2-204ENST00000488857 RBM17Q96I25 401 aaKnown RBP28.76■■■□□ 2.19
VAMP2-204ENST00000488857 TIAM2Q8IVF5 1701 aa28.76■■■□□ 2.19
VAMP2-204ENST00000488857 SLC4A2P04920 1241 aa28.75■■■□□ 2.19
VAMP2-204ENST00000488857 ZNF526Q8TF50 670 aaPredicted RBP28.75■■■□□ 2.19
VAMP2-204ENST00000488857 METTL22Q9BUU2 404 aaPredicted RBP28.75■■■□□ 2.19
VAMP2-204ENST00000488857 SNED1Q8TER0 1413 aa28.75■■■□□ 2.19
VAMP2-204ENST00000488857 HCLS1P14317 486 aaPredicted RBP28.74■■■□□ 2.19
VAMP2-204ENST00000488857 KSR2Q6VAB6 950 aa28.74■■■□□ 2.19
VAMP2-204ENST00000488857 TCERG1O14776 1098 aaKnown RBP28.73■■■□□ 2.19
VAMP2-204ENST00000488857 RTKN2Q8IZC4 609 aa28.73■■■□□ 2.19
VAMP2-204ENST00000488857 CCDC191Q8NCU4 936 aa28.73■■■□□ 2.19
VAMP2-204ENST00000488857 MYD88Q99836 296 aa28.73■■■□□ 2.19
VAMP2-204ENST00000488857 DIEXFQ68CQ4 756 aaKnown RBP28.72■■■□□ 2.19
VAMP2-204ENST00000488857 CC2D2BQ6DHV5 1058 aa28.72■■■□□ 2.19
VAMP2-204ENST00000488857 MAP3K2Q9Y2U5 619 aa28.72■■■□□ 2.19
VAMP2-204ENST00000488857 PI4KAP2A4QPH2 592 aa28.71■■■□□ 2.19
VAMP2-204ENST00000488857 G2E3Q7L622 706 aa28.71■■■□□ 2.19
VAMP2-204ENST00000488857 PI4KAP1Q8N8J0 262 aa28.71■■■□□ 2.19
VAMP2-204ENST00000488857 FAM89AQ96GI7 184 aa28.71■■■□□ 2.19
VAMP2-204ENST00000488857 FKBP4Q02790 459 aaKnown RBP eCLIP28.7■■■□□ 2.18
VAMP2-204ENST00000488857 OLFM4Q6UX06 510 aa28.7■■■□□ 2.18
VAMP2-204ENST00000488857 ZBTB38Q8NAP3 1195 aaPredicted RBP28.7■■■□□ 2.18
VAMP2-204ENST00000488857 FLIIQ13045 1269 aa28.69■■■□□ 2.18
VAMP2-204ENST00000488857 GRIPAP1Q4V328 841 aa28.69■■■□□ 2.18
VAMP2-204ENST00000488857 ABCC4O15439 1325 aa28.69■■■□□ 2.18
VAMP2-204ENST00000488857 ZNF428Q96B54 188 aa28.68■■■□□ 2.18
VAMP2-204ENST00000488857 CWC25Q9NXE8 425 aaPredicted RBP28.68■■■□□ 2.18
VAMP2-204ENST00000488857 KDM2BQ8NHM5 1336 aa28.68■■■□□ 2.18
VAMP2-204ENST00000488857 E9PSI1 815 aa28.67■■■□□ 2.18
VAMP2-204ENST00000488857 KIF3CO14782 793 aa28.67■■■□□ 2.18
VAMP2-204ENST00000488857 PPEF1O14829 653 aaPredicted RBP28.67■■■□□ 2.18
VAMP2-204ENST00000488857 C1QTNF8P60827 252 aa28.67■■■□□ 2.18
VAMP2-204ENST00000488857 SF3B3Q15393 1217 aaKnown RBP28.67■■■□□ 2.18
VAMP2-204ENST00000488857 PSMD1Q99460 953 aa28.67■■■□□ 2.18
VAMP2-204ENST00000488857 IRS4O14654 1257 aaPredicted RBP28.66■■■□□ 2.18
VAMP2-204ENST00000488857 PCCAP05165 728 aaPredicted RBP28.66■■■□□ 2.18
VAMP2-204ENST00000488857 HSP90B1P14625 803 aaKnown RBP28.66■■■□□ 2.18
VAMP2-204ENST00000488857 BBOX1O75936 387 aa28.65■■■□□ 2.18
VAMP2-204ENST00000488857 IGKV5-2P06315 115 aa28.65■■■□□ 2.18
VAMP2-204ENST00000488857 NEXNQ0ZGT2 675 aa28.65■■■□□ 2.18
VAMP2-204ENST00000488857 DDX46Q7L014 1031 aaKnown RBP28.65■■■□□ 2.18
VAMP2-204ENST00000488857 ATP6V0A2Q9Y487 856 aa28.64■■■□□ 2.18
VAMP2-204ENST00000488857 GLTPD2A6NH11 291 aa28.63■■■□□ 2.17
VAMP2-204ENST00000488857 SLFN5Q08AF3 891 aa28.63■■■□□ 2.17
VAMP2-204ENST00000488857 FKBP5Q13451 457 aaPredicted RBP28.63■■■□□ 2.17
VAMP2-204ENST00000488857 NMRK2Q9NPI5 230 aa28.63■■■□□ 2.17
VAMP2-204ENST00000488857 TAF1P21675 1872 aa28.62■■■□□ 2.17
VAMP2-204ENST00000488857 GRAPQ13588 217 aa28.62■■■□□ 2.17
VAMP2-204ENST00000488857 RTL5Q5HYW3 569 aaPredicted RBP28.62■■■□□ 2.17
VAMP2-204ENST00000488857 MIER1Q8N108 512 aa28.62■■■□□ 2.17
VAMP2-204ENST00000488857 GRAPLQ8TC17 118 aaPredicted RBP28.62■■■□□ 2.17
VAMP2-204ENST00000488857 TMC4Q7Z404 712 aa28.61■■■□□ 2.17
VAMP2-204ENST00000488857 ZNF277Q9NRM2 450 aaPredicted RBP28.61■■■□□ 2.17
VAMP2-204ENST00000488857 CDHR2Q9BYE9 1310 aa28.61■■■□□ 2.17
VAMP2-204ENST00000488857 LRRC37AA6NMS7 1700 aa28.6■■■□□ 2.17
VAMP2-204ENST00000488857 NEURL1BA8MQ27 555 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms