RNA–Protein interactions for RNA: ENST00000488758.1

APOBEC3A-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 2

Gene APOBEC3A, Length 344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-203ENST00000488758 METRNQ9UJH8 293 aa9.51□□□□□ -0.89
APOBEC3A-203ENST00000488758 ZBTB1Q9Y2K1 713 aa9.51□□□□□ -0.89
APOBEC3A-203ENST00000488758 A0A087WZG4 1122 aa9.5□□□□□ -0.89
APOBEC3A-203ENST00000488758 GNAI3P08754 354 aa9.5□□□□□ -0.89
APOBEC3A-203ENST00000488758 KCNQ4P56696 695 aa9.5□□□□□ -0.89
APOBEC3A-203ENST00000488758 SLC27A3Q5K4L6 730 aa9.5□□□□□ -0.89
APOBEC3A-203ENST00000488758 RC3H1Q5TC82 1133 aaKnown RBP9.5□□□□□ -0.89
APOBEC3A-203ENST00000488758 DZIP3Q86Y13 1208 aaKnown RBP9.5□□□□□ -0.89
APOBEC3A-203ENST00000488758 LINC00116Q8NCU8 138 aa9.5□□□□□ -0.89
APOBEC3A-203ENST00000488758 LINS1Q8NG48 757 aa9.5□□□□□ -0.89
APOBEC3A-203ENST00000488758 MYD88Q99836 296 aa9.5□□□□□ -0.89
APOBEC3A-203ENST00000488758 RWDD1Q9H446 243 aaPredicted RBP9.5□□□□□ -0.89
APOBEC3A-203ENST00000488758 ZBTB3Q9H5J0 574 aa9.5□□□□□ -0.89
APOBEC3A-203ENST00000488758 HDAC5Q9UQL6 1122 aa9.5□□□□□ -0.89
APOBEC3A-203ENST00000488758 PXDNLA1KZ92 1463 aa9.5□□□□□ -0.89
APOBEC3A-203ENST00000488758 TJP1Q07157 1748 aa9.49□□□□□ -0.89
APOBEC3A-203ENST00000488758 EIF5P55010 431 aaKnown RBP9.49□□□□□ -0.89
APOBEC3A-203ENST00000488758 C9orf78Q9NZ63 289 aaPredicted RBP9.49□□□□□ -0.89
APOBEC3A-203ENST00000488758 PCDHB15Q9Y5E8 787 aa9.49□□□□□ -0.89
APOBEC3A-203ENST00000488758 MAP3K15Q6ZN16 1313 aa9.49□□□□□ -0.89
APOBEC3A-203ENST00000488758 CNTNAP4Q9C0A0 1308 aa9.49□□□□□ -0.89
APOBEC3A-203ENST00000488758 ZNF831Q5JPB2 1677 aa9.48□□□□□ -0.89
APOBEC3A-203ENST00000488758 ATP10DQ9P241 1426 aa9.48□□□□□ -0.89
APOBEC3A-203ENST00000488758 PLSCR1O15162 318 aa9.48□□□□□ -0.89
APOBEC3A-203ENST00000488758 RPS6KA4O75676 772 aa9.48□□□□□ -0.89
APOBEC3A-203ENST00000488758 GNAI2P04899 355 aa9.48□□□□□ -0.89
APOBEC3A-203ENST00000488758 UBTFL1P0CB47 393 aaPredicted RBP9.48□□□□□ -0.89
APOBEC3A-203ENST00000488758 BAG6P46379 1132 aa9.48□□□□□ -0.89
APOBEC3A-203ENST00000488758 EN1Q05925 392 aaPredicted RBP9.48□□□□□ -0.89
APOBEC3A-203ENST00000488758 R3HDM1Q15032 1099 aaKnown RBP9.48□□□□□ -0.89
APOBEC3A-203ENST00000488758 HSP90AB3PQ58FF7 597 aa9.48□□□□□ -0.89
APOBEC3A-203ENST00000488758 MEIS3Q99687 375 aa9.48□□□□□ -0.89
APOBEC3A-203ENST00000488758 USP44Q9H0E7 712 aa9.48□□□□□ -0.89
APOBEC3A-203ENST00000488758 C1orf115Q9H7X2 142 aa9.48□□□□□ -0.89
APOBEC3A-203ENST00000488758 TBC1D2BQ9UPU7 963 aa9.48□□□□□ -0.89
APOBEC3A-203ENST00000488758 RTCBQ9Y3I0 505 aaKnown RBP9.48□□□□□ -0.89
APOBEC3A-203ENST00000488758 NEURL1BA8MQ27 555 aa9.47□□□□□ -0.89
APOBEC3A-203ENST00000488758 ERVV-1B6SEH8 477 aa9.47□□□□□ -0.89
APOBEC3A-203ENST00000488758 ATP5J2-PTCD1G3V325 749 aa9.47□□□□□ -0.89
APOBEC3A-203ENST00000488758 GNPATO15228 680 aa9.47□□□□□ -0.89
APOBEC3A-203ENST00000488758 IGKV5-2P06315 115 aa9.47□□□□□ -0.89
APOBEC3A-203ENST00000488758 C7P10643 843 aa9.47□□□□□ -0.89
APOBEC3A-203ENST00000488758 TCIRG1Q13488 830 aa9.47□□□□□ -0.89
APOBEC3A-203ENST00000488758 TXNRD1Q16881 649 aa9.47□□□□□ -0.89
APOBEC3A-203ENST00000488758 CWF19L2Q2TBE0 894 aaKnown RBP9.47□□□□□ -0.89
APOBEC3A-203ENST00000488758 LHX8Q68G74 356 aa9.47□□□□□ -0.89
APOBEC3A-203ENST00000488758 GIGYF2Q6Y7W6 1299 aaKnown RBP9.47□□□□□ -0.89
APOBEC3A-203ENST00000488758 RPAP2Q8IXW5 612 aaPredicted RBP9.47□□□□□ -0.89
APOBEC3A-203ENST00000488758 RNF25Q96BH1 459 aaPredicted RBP9.47□□□□□ -0.89
APOBEC3A-203ENST00000488758 AK7Q96M32 723 aa9.47□□□□□ -0.89
APOBEC3A-203ENST00000488758 CICQ96RK0 1608 aaPredicted RBP9.46□□□□□ -0.89
APOBEC3A-203ENST00000488758 LY75O60449 1722 aa9.46□□□□□ -0.89
APOBEC3A-203ENST00000488758 GRM8O00222 908 aa9.46□□□□□ -0.9
APOBEC3A-203ENST00000488758 PSEN1P49768 467 aa9.46□□□□□ -0.9
APOBEC3A-203ENST00000488758 PDAP1Q13442 181 aaKnown RBP9.46□□□□□ -0.9
APOBEC3A-203ENST00000488758 GCKRQ14397 625 aa9.46□□□□□ -0.9
APOBEC3A-203ENST00000488758 CENPQQ7L2Z9 268 aaPredicted RBP9.46□□□□□ -0.9
APOBEC3A-203ENST00000488758 CCDC191Q8NCU4 936 aa9.46□□□□□ -0.9
APOBEC3A-203ENST00000488758 LRRC4BQ9NT99 713 aa9.46□□□□□ -0.9
APOBEC3A-203ENST00000488758 CWC25Q9NXE8 425 aaPredicted RBP9.46□□□□□ -0.9
APOBEC3A-203ENST00000488758 ZPR1O75312 459 aa9.45□□□□□ -0.9
APOBEC3A-203ENST00000488758 HMMRO75330 724 aa9.45□□□□□ -0.9
APOBEC3A-203ENST00000488758 IGHDP01880 384 aa9.45□□□□□ -0.9
APOBEC3A-203ENST00000488758 NBPF7P0C2Y1 421 aaPredicted RBP9.45□□□□□ -0.9
APOBEC3A-203ENST00000488758 YY1P25490 414 aa9.45□□□□□ -0.9
APOBEC3A-203ENST00000488758 TRIM28Q13263 835 aaKnown RBP9.45□□□□□ -0.9
APOBEC3A-203ENST00000488758 HDAC1Q13547 482 aaPredicted RBP9.45□□□□□ -0.9
APOBEC3A-203ENST00000488758 HLFQ16534 295 aa9.45□□□□□ -0.9
APOBEC3A-203ENST00000488758 TRAPPC3LQ5T215 181 aa9.45□□□□□ -0.9
APOBEC3A-203ENST00000488758 ANKRD44Q8N8A2 993 aa9.45□□□□□ -0.9
APOBEC3A-203ENST00000488758 ISCA1Q9BUE6 129 aa9.45□□□□□ -0.9
APOBEC3A-203ENST00000488758 ZNF652Q9Y2D9 606 aa9.45□□□□□ -0.9
APOBEC3A-203ENST00000488758 LRRFIP2Q9Y608 721 aaKnown RBP9.45□□□□□ -0.9
APOBEC3A-203ENST00000488758 COL15A1P39059 1388 aa9.45□□□□□ -0.9
APOBEC3A-203ENST00000488758 COL5A3P25940 1745 aaPredicted RBP9.45□□□□□ -0.9
APOBEC3A-203ENST00000488758 MYH14Q7Z406 1995 aaKnown RBP9.44□□□□□ -0.9
APOBEC3A-203ENST00000488758 CAMTA2O94983 1202 aa9.44□□□□□ -0.9
APOBEC3A-203ENST00000488758 RFC4P35249 363 aa9.44□□□□□ -0.9
APOBEC3A-203ENST00000488758 ATP8B2P98198 1209 aa9.44□□□□□ -0.9
APOBEC3A-203ENST00000488758 IER5LQ5T953 404 aa9.44□□□□□ -0.9
APOBEC3A-203ENST00000488758 CEP85Q6P2H3 762 aa9.44□□□□□ -0.9
APOBEC3A-203ENST00000488758 IBTKQ9P2D0 1353 aaPredicted RBP9.44□□□□□ -0.9
APOBEC3A-203ENST00000488758 NUP188Q5SRE5 1749 aa9.44□□□□□ -0.9
APOBEC3A-203ENST00000488758 ARFGEF2Q9Y6D5 1785 aa9.44□□□□□ -0.9
APOBEC3A-203ENST00000488758 N4BP2Q86UW6 1770 aaPredicted RBP9.43□□□□□ -0.9
APOBEC3A-203ENST00000488758 RREB1Q92766 1687 aa9.43□□□□□ -0.9
APOBEC3A-203ENST00000488758 UTYO14607 1347 aa9.43□□□□□ -0.9
APOBEC3A-203ENST00000488758 H7C1W4 665 aa9.43□□□□□ -0.9
APOBEC3A-203ENST00000488758 RIOK3O14730 519 aaKnown RBP9.43□□□□□ -0.9
APOBEC3A-203ENST00000488758 ECM2O94769 699 aaPredicted RBP9.43□□□□□ -0.9
APOBEC3A-203ENST00000488758 PHF14O94880 888 aa9.43□□□□□ -0.9
APOBEC3A-203ENST00000488758 GPTP24298 496 aa9.43□□□□□ -0.9
APOBEC3A-203ENST00000488758 EZH2Q15910 746 aaKnown RBP9.43□□□□□ -0.9
APOBEC3A-203ENST00000488758 USPL1Q5W0Q7 1092 aa9.43□□□□□ -0.9
APOBEC3A-203ENST00000488758 CLEC4GQ6UXB4 293 aa9.43□□□□□ -0.9
APOBEC3A-203ENST00000488758 UBE3BQ7Z3V4 1068 aa9.43□□□□□ -0.9
APOBEC3A-203ENST00000488758 JARID2Q92833 1246 aaPredicted RBP9.43□□□□□ -0.9
APOBEC3A-203ENST00000488758 ARHGEF1Q92888 912 aaKnown RBP9.43□□□□□ -0.9
APOBEC3A-203ENST00000488758 NARFQ9UHQ1 456 aa9.43□□□□□ -0.9
APOBEC3A-203ENST00000488758 TAF1LQ8IZX4 1826 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms