RNA–Protein interactions for RNA: ENST00000488535.2

ABCA2-219, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 3,327 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-219ENST00000488535 SNX14Q9Y5W7 946 aa15.5■□□□□ 0.07
ABCA2-219ENST00000488535 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.5■□□□□ 0.07
ABCA2-219ENST00000488535 DNAJC5Q9H3Z4 198 aa15.5■□□□□ 0.07
ABCA2-219ENST00000488535 AATKQ6ZMQ8 1374 aa15.5■□□□□ 0.07
ABCA2-219ENST00000488535 RPAP1Q9BWH6 1393 aaPredicted RBP15.5■□□□□ 0.07
ABCA2-219ENST00000488535 CDC42BPGQ6DT37 1551 aa15.5■□□□□ 0.07
ABCA2-219ENST00000488535 ZNF397Q8NF99 534 aaPredicted RBP15.5■□□□□ 0.07
ABCA2-219ENST00000488535 STK31Q9BXU1 1019 aa15.5■□□□□ 0.07
ABCA2-219ENST00000488535 TTC21AQ8NDW8 1320 aa15.49■□□□□ 0.07
ABCA2-219ENST00000488535 ZNF75DP51815 510 aa15.49■□□□□ 0.07
ABCA2-219ENST00000488535 LRRC59Q96AG4 307 aaKnown RBP15.49■□□□□ 0.07
ABCA2-219ENST00000488535 CALCOCO1Q9P1Z2 691 aa15.49■□□□□ 0.07
ABCA2-219ENST00000488535 CCDC9Q9Y3X0 531 aaKnown RBP15.49■□□□□ 0.07
ABCA2-219ENST00000488535 PAXBP1Q9Y5B6 917 aa15.49■□□□□ 0.07
ABCA2-219ENST00000488535 ADCK5Q3MIX3 580 aa15.48■□□□□ 0.07
ABCA2-219ENST00000488535 CHMP4CQ96CF2 233 aa15.48■□□□□ 0.07
ABCA2-219ENST00000488535 SETD1AO15047 1707 aaKnown RBP15.48■□□□□ 0.07
ABCA2-219ENST00000488535 HNRNPH2P55795 449 aaKnown RBP15.48■□□□□ 0.07
ABCA2-219ENST00000488535 NR1I2O75469 434 aa15.48■□□□□ 0.07
ABCA2-219ENST00000488535 HOXC9P31274 260 aa15.48■□□□□ 0.07
ABCA2-219ENST00000488535 C10orf67Q8IYJ2 551 aa15.48■□□□□ 0.07
ABCA2-219ENST00000488535 CCDC34Q96HJ3 373 aa15.48■□□□□ 0.07
ABCA2-219ENST00000488535 MTMR6Q9Y217 621 aa15.48■□□□□ 0.07
ABCA2-219ENST00000488535 RIMS1Q86UR5 1692 aaKnown RBP15.48■□□□□ 0.07
ABCA2-219ENST00000488535 HSP90B1P14625 803 aaKnown RBP15.47■□□□□ 0.07
ABCA2-219ENST00000488535 SYT10Q6XYQ8 523 aa15.46■□□□□ 0.07
ABCA2-219ENST00000488535 PTCH1Q13635 1447 aa15.46■□□□□ 0.07
ABCA2-219ENST00000488535 CCDC69A6NI79 296 aa15.46■□□□□ 0.07
ABCA2-219ENST00000488535 SMC2O95347 1197 aa15.46■□□□□ 0.07
ABCA2-219ENST00000488535 GYS2P54840 703 aa15.46■□□□□ 0.07
ABCA2-219ENST00000488535 ZRSR1Q15695 479 aaKnown RBP15.46■□□□□ 0.07
ABCA2-219ENST00000488535 PTPN21Q16825 1174 aa15.46■□□□□ 0.07
ABCA2-219ENST00000488535 ZCCHC17Q9NP64 241 aaKnown RBP15.46■□□□□ 0.07
ABCA2-219ENST00000488535 FLT4P35916 1363 aa15.46■□□□□ 0.07
ABCA2-219ENST00000488535 CDK12Q9NYV4 1490 aaPredicted RBP15.46■□□□□ 0.07
ABCA2-219ENST00000488535 ATF3P18847 181 aa15.46■□□□□ 0.06
ABCA2-219ENST00000488535 EIF2S2P20042 333 aaKnown RBP15.46■□□□□ 0.06
ABCA2-219ENST00000488535 ISM2Q6H9L7 571 aa15.46■□□□□ 0.06
ABCA2-219ENST00000488535 DNAJC2Q99543 621 aaKnown RBP15.46■□□□□ 0.06
ABCA2-219ENST00000488535 EPC1Q9H2F5 836 aa15.46■□□□□ 0.06
ABCA2-219ENST00000488535 SETD1BQ9UPS6 1966 aaKnown RBP15.45■□□□□ 0.06
ABCA2-219ENST00000488535 H3BQV1 296 aa15.45■□□□□ 0.06
ABCA2-219ENST00000488535 ARHGAP29Q52LW3 1261 aa15.45■□□□□ 0.06
ABCA2-219ENST00000488535 IFFO2Q5TF58 517 aa15.45■□□□□ 0.06
ABCA2-219ENST00000488535 LRRN4CLQ8ND94 238 aa15.45■□□□□ 0.06
ABCA2-219ENST00000488535 CABLES1Q8TDN4 633 aa15.45■□□□□ 0.06
ABCA2-219ENST00000488535 RAD50Q92878 1312 aa15.45■□□□□ 0.06
ABCA2-219ENST00000488535 RGS12O14924 1447 aa15.45■□□□□ 0.06
ABCA2-219ENST00000488535 ANAPC15P60006 121 aa15.45■□□□□ 0.06
ABCA2-219ENST00000488535 FUCA2Q9BTY2 467 aa15.45■□□□□ 0.06
ABCA2-219ENST00000488535 ARHGAP23Q9P227 1491 aa15.45■□□□□ 0.06
ABCA2-219ENST00000488535 CYP46A1Q9Y6A2 500 aa15.45■□□□□ 0.06
ABCA2-219ENST00000488535 MORC2Q9Y6X9 1032 aaPredicted RBP15.45■□□□□ 0.06
ABCA2-219ENST00000488535 HTATSF1O43719 755 aaKnown RBP15.45■□□□□ 0.06
ABCA2-219ENST00000488535 HSPA4P34932 840 aa15.45■□□□□ 0.06
ABCA2-219ENST00000488535 CAPN2P17655 700 aa15.44■□□□□ 0.06
ABCA2-219ENST00000488535 RBM6P78332 1123 aaKnown RBP15.44■□□□□ 0.06
ABCA2-219ENST00000488535 KIF20BQ96Q89 1820 aa15.44■□□□□ 0.06
ABCA2-219ENST00000488535 RAB11FIP3O75154 756 aa15.44■□□□□ 0.06
ABCA2-219ENST00000488535 SEC31AO94979 1220 aaKnown RBP15.44■□□□□ 0.06
ABCA2-219ENST00000488535 UBTFL1P0CB47 393 aaPredicted RBP15.44■□□□□ 0.06
ABCA2-219ENST00000488535 ME3Q16798 604 aa15.44■□□□□ 0.06
ABCA2-219ENST00000488535 CEP170BQ9Y4F5 1589 aaPredicted RBP15.43■□□□□ 0.06
ABCA2-219ENST00000488535 SLIT1O75093 1534 aa15.43■□□□□ 0.06
ABCA2-219ENST00000488535 ATP10DQ9P241 1426 aa15.43■□□□□ 0.06
ABCA2-219ENST00000488535 SRGAP3O43295 1099 aa15.43■□□□□ 0.06
ABCA2-219ENST00000488535 SLU7O95391 586 aaKnown RBP15.43■□□□□ 0.06
ABCA2-219ENST00000488535 GUCY1B3Q02153 619 aa15.43■□□□□ 0.06
ABCA2-219ENST00000488535 MNS1Q8NEH6 495 aa15.43■□□□□ 0.06
ABCA2-219ENST00000488535 TOMM22Q9NS69 142 aa15.43■□□□□ 0.06
ABCA2-219ENST00000488535 OVOS2A0A0J9YW53 1432 aa15.43■□□□□ 0.06
ABCA2-219ENST00000488535 OVOS2Q6IE36 1432 aa15.43■□□□□ 0.06
ABCA2-219ENST00000488535 BIN1O00499 593 aa15.43■□□□□ 0.06
ABCA2-219ENST00000488535 BRPF1P55201 1214 aaPredicted RBP15.43■□□□□ 0.06
ABCA2-219ENST00000488535 PTH1RQ03431 593 aa15.43■□□□□ 0.06
ABCA2-219ENST00000488535 KRBA2Q6ZNG9 492 aa15.43■□□□□ 0.06
ABCA2-219ENST00000488535 KRT28Q7Z3Y7 464 aa15.43■□□□□ 0.06
ABCA2-219ENST00000488535 ZSWIM4Q9H7M6 989 aa15.43■□□□□ 0.06
ABCA2-219ENST00000488535 CSB-PGBD3P0DP91 1061 aa15.42■□□□□ 0.06
ABCA2-219ENST00000488535 SNW1Q13573 536 aaKnown RBP15.42■□□□□ 0.06
ABCA2-219ENST00000488535 COL9A3Q14050 684 aaPredicted RBP15.42■□□□□ 0.06
ABCA2-219ENST00000488535 LARP1Q6PKG0 1096 aaKnown RBP15.42■□□□□ 0.06
ABCA2-219ENST00000488535 LRRC8AQ8IWT6 810 aa15.42■□□□□ 0.06
ABCA2-219ENST00000488535 SBNO1A3KN83 1393 aa15.42■□□□□ 0.06
ABCA2-219ENST00000488535 ZKSCAN1P17029 563 aaPredicted RBP15.42■□□□□ 0.06
ABCA2-219ENST00000488535 CNTROBQ8N137 903 aa15.42■□□□□ 0.06
ABCA2-219ENST00000488535 LRRC2Q9BYS8 371 aa15.42■□□□□ 0.06
ABCA2-219ENST00000488535 FTOQ9C0B1 505 aaKnown RBP eCLIP15.42■□□□□ 0.06
ABCA2-219ENST00000488535 DIP2AQ14689 1571 aa15.42■□□□□ 0.06
ABCA2-219ENST00000488535 ZNF853P0CG23 659 aa15.42■□□□□ 0.06
ABCA2-219ENST00000488535 NBPF6Q5VWK0 638 aa15.42■□□□□ 0.06
ABCA2-219ENST00000488535 C11orf57Q6ZUT1 292 aaPredicted RBP15.42■□□□□ 0.06
ABCA2-219ENST00000488535 NBPF4Q96M43 638 aa15.42■□□□□ 0.06
ABCA2-219ENST00000488535 RSPH14Q9UHP6 348 aa15.42■□□□□ 0.06
ABCA2-219ENST00000488535 URI1O94763 535 aaPredicted RBP15.41■□□□□ 0.06
ABCA2-219ENST00000488535 GCP02774 474 aa15.41■□□□□ 0.06
ABCA2-219ENST00000488535 SIL1Q9H173 461 aa15.41■□□□□ 0.06
ABCA2-219ENST00000488535 NPHP4O75161 1426 aaPredicted RBP15.41■□□□□ 0.06
ABCA2-219ENST00000488535 DNAI1Q9UI46 699 aa15.41■□□□□ 0.06
ABCA2-219ENST00000488535 GNAT3A8MTJ3 354 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms