RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 SASH1O94885 1247 aa24.87■■□□□ 1.57
NECAB3-213ENST00000488489 SMARCC1Q92922 1105 aaPredicted RBP24.87■■□□□ 1.57
NECAB3-213ENST00000488489 ATRNO75882 1429 aa24.87■■□□□ 1.57
NECAB3-213ENST00000488489 SIL1Q9H173 461 aa24.86■■□□□ 1.57
NECAB3-213ENST00000488489 CCDC87Q9NVE4 849 aa24.86■■□□□ 1.57
NECAB3-213ENST00000488489 TBC1D2BQ9UPU7 963 aa24.86■■□□□ 1.57
NECAB3-213ENST00000488489 EIF5P55010 431 aaKnown RBP24.86■■□□□ 1.57
NECAB3-213ENST00000488489 LMBR1LQ6UX01 489 aa24.86■■□□□ 1.57
NECAB3-213ENST00000488489 TUBGCP6Q96RT7 1819 aa24.85■■□□□ 1.57
NECAB3-213ENST00000488489 ONECUT3O60422 494 aaPredicted RBP24.85■■□□□ 1.57
NECAB3-213ENST00000488489 TRPC5Q9UL62 973 aaPredicted RBP24.85■■□□□ 1.57
NECAB3-213ENST00000488489 PTPN12Q05209 780 aaKnown RBP24.85■■□□□ 1.57
NECAB3-213ENST00000488489 G3BP1Q13283 466 aaKnown RBP eCLIP24.85■■□□□ 1.57
NECAB3-213ENST00000488489 DZIP3Q86Y13 1208 aaKnown RBP24.85■■□□□ 1.57
NECAB3-213ENST00000488489 ERC1Q8IUD2 1116 aa24.85■■□□□ 1.57
NECAB3-213ENST00000488489 C22orf23Q9BZE7 217 aa24.85■■□□□ 1.57
NECAB3-213ENST00000488489 COPRSQ9NQ92 184 aa24.85■■□□□ 1.57
NECAB3-213ENST00000488489 EP400Q96L91 3159 aa24.84■■□□□ 1.57
NECAB3-213ENST00000488489 CICQ96RK0 1608 aaPredicted RBP24.84■■□□□ 1.57
NECAB3-213ENST00000488489 GPTP24298 496 aa24.82■■□□□ 1.56
NECAB3-213ENST00000488489 CLASRPQ8N2M8 674 aaKnown RBP24.82■■□□□ 1.56
NECAB3-213ENST00000488489 NUP98P52948 1817 aa24.82■■□□□ 1.56
NECAB3-213ENST00000488489 KCNQ4P56696 695 aa24.82■■□□□ 1.56
NECAB3-213ENST00000488489 PI4K2BQ8TCG2 481 aa24.82■■□□□ 1.56
NECAB3-213ENST00000488489 FAM89AQ96GI7 184 aa24.82■■□□□ 1.56
NECAB3-213ENST00000488489 AOX1Q06278 1338 aa24.81■■□□□ 1.56
NECAB3-213ENST00000488489 RREB1Q92766 1687 aa24.81■■□□□ 1.56
NECAB3-213ENST00000488489 ERVV-1B6SEH8 477 aa24.81■■□□□ 1.56
NECAB3-213ENST00000488489 NLRP10Q86W26 655 aa24.81■■□□□ 1.56
NECAB3-213ENST00000488489 SEPT12Q8IYM1 358 aa24.8■■□□□ 1.56
NECAB3-213ENST00000488489 QTRT2Q9H974 415 aaKnown RBP24.8■■□□□ 1.56
NECAB3-213ENST00000488489 COL5A3P25940 1745 aaPredicted RBP24.79■■□□□ 1.56
NECAB3-213ENST00000488489 PCCAP05165 728 aaPredicted RBP24.79■■□□□ 1.56
NECAB3-213ENST00000488489 HSP90AB3PQ58FF7 597 aa24.79■■□□□ 1.56
NECAB3-213ENST00000488489 SYNE4Q8N205 404 aa24.79■■□□□ 1.56
NECAB3-213ENST00000488489 ZBTB38Q8NAP3 1195 aaPredicted RBP24.79■■□□□ 1.56
NECAB3-213ENST00000488489 EAF2Q96CJ1 260 aaPredicted RBP24.79■■□□□ 1.56
NECAB3-213ENST00000488489 CHMP3Q9Y3E7 222 aa24.79■■□□□ 1.56
NECAB3-213ENST00000488489 BTAF1O14981 1849 aa24.79■■□□□ 1.56
NECAB3-213ENST00000488489 LINC00116Q8NCU8 138 aa24.79■■□□□ 1.56
NECAB3-213ENST00000488489 USP42Q9H9J4 1324 aaKnown RBP24.79■■□□□ 1.56
NECAB3-213ENST00000488489 ANKRD36CQ5JPF3 1778 aa24.78■■□□□ 1.56
NECAB3-213ENST00000488489 ZNF831Q5JPB2 1677 aa24.78■■□□□ 1.56
NECAB3-213ENST00000488489 SLC4A3P48751 1232 aa24.77■■□□□ 1.56
NECAB3-213ENST00000488489 AACSQ86V21 672 aa24.77■■□□□ 1.56
NECAB3-213ENST00000488489 NHSQ6T4R5 1651 aa24.77■■□□□ 1.56
NECAB3-213ENST00000488489 UBN2Q6ZU65 1347 aa24.76■■□□□ 1.55
NECAB3-213ENST00000488489 TRIM6-TRIM34B2RNG4 842 aa24.76■■□□□ 1.55
NECAB3-213ENST00000488489 RBM25P49756 843 aaKnown RBP24.76■■□□□ 1.55
NECAB3-213ENST00000488489 RILPL2Q969X0 211 aa24.76■■□□□ 1.55
NECAB3-213ENST00000488489 IFIT2P09913 472 aaKnown RBP24.76■■□□□ 1.55
NECAB3-213ENST00000488489 ZNF34Q8IZ26 560 aa24.76■■□□□ 1.55
NECAB3-213ENST00000488489 TTC41PQ6P2S7 1318 aa24.75■■□□□ 1.55
NECAB3-213ENST00000488489 DAXXQ9UER7 740 aaPredicted RBP24.75■■□□□ 1.55
NECAB3-213ENST00000488489 CAMTA2O94983 1202 aa24.74■■□□□ 1.55
NECAB3-213ENST00000488489 MAP4K4O95819 1239 aaPredicted RBP24.74■■□□□ 1.55
NECAB3-213ENST00000488489 PLA2G12BQ9BX93 195 aa24.74■■□□□ 1.55
NECAB3-213ENST00000488489 CCDC8Q9H0W5 538 aaPredicted RBP24.74■■□□□ 1.55
NECAB3-213ENST00000488489 TLR7Q9NYK1 1049 aaKnown RBP24.74■■□□□ 1.55
NECAB3-213ENST00000488489 SBF2Q86WG5 1849 aa24.74■■□□□ 1.55
NECAB3-213ENST00000488489 TFCP2Q12800 502 aa24.73■■□□□ 1.55
NECAB3-213ENST00000488489 ECHDC1Q9NTX5 307 aa24.73■■□□□ 1.55
NECAB3-213ENST00000488489 CASC1Q6TDU7 716 aa24.73■■□□□ 1.55
NECAB3-213ENST00000488489 ATG9AQ7Z3C6 839 aa24.73■■□□□ 1.55
NECAB3-213ENST00000488489 ZNF594Q96JF6 807 aaPredicted RBP24.73■■□□□ 1.55
NECAB3-213ENST00000488489 CDHR2Q9BYE9 1310 aa24.72■■□□□ 1.55
NECAB3-213ENST00000488489 TRMT112Q9UI30 125 aaKnown RBP24.72■■□□□ 1.55
NECAB3-213ENST00000488489 CSF1RP07333 972 aa24.71■■□□□ 1.55
NECAB3-213ENST00000488489 GLRX3O76003 335 aaKnown RBP24.71■■□□□ 1.55
NECAB3-213ENST00000488489 CCDC85AQ96PX6 553 aaPredicted RBP24.71■■□□□ 1.55
NECAB3-213ENST00000488489 CHMLP26374 656 aa24.7■■□□□ 1.54
NECAB3-213ENST00000488489 NFKBIBQ15653 356 aa24.7■■□□□ 1.54
NECAB3-213ENST00000488489 SMIM5Q71RC9 77 aa24.7■■□□□ 1.54
NECAB3-213ENST00000488489 ERC2O15083 957 aa24.69■■□□□ 1.54
NECAB3-213ENST00000488489 LRRC24Q50LG9 513 aa24.69■■□□□ 1.54
NECAB3-213ENST00000488489 TNNI3KQ59H18 835 aa24.69■■□□□ 1.54
NECAB3-213ENST00000488489 KIF2CQ99661 725 aa24.69■■□□□ 1.54
NECAB3-213ENST00000488489 USP26Q9BXU7 913 aa24.69■■□□□ 1.54
NECAB3-213ENST00000488489 FPGT-TNNI3KV9GXZ4 949 aa24.69■■□□□ 1.54
NECAB3-213ENST00000488489 CNTNAP4Q9C0A0 1308 aa24.69■■□□□ 1.54
NECAB3-213ENST00000488489 IRS4O14654 1257 aaPredicted RBP24.68■■□□□ 1.54
NECAB3-213ENST00000488489 SUSD4Q5VX71 490 aa24.68■■□□□ 1.54
NECAB3-213ENST00000488489 GPATCH3Q96I76 525 aa24.68■■□□□ 1.54
NECAB3-213ENST00000488489 CCDC57Q2TAC2 916 aa24.68■■□□□ 1.54
NECAB3-213ENST00000488489 PUS3Q9BZE2 481 aaKnown RBP24.68■■□□□ 1.54
NECAB3-213ENST00000488489 AK9Q5TCS8 1911 aa24.67■■□□□ 1.54
NECAB3-213ENST00000488489 EYA2O00167 538 aa24.67■■□□□ 1.54
NECAB3-213ENST00000488489 TTLL11Q8NHH1 800 aa24.67■■□□□ 1.54
NECAB3-213ENST00000488489 DBNLQ9UJU6 430 aaKnown RBP24.67■■□□□ 1.54
NECAB3-213ENST00000488489 CCNL1Q9UK58 526 aaPredicted RBP24.67■■□□□ 1.54
NECAB3-213ENST00000488489 ESYT1Q9BSJ8 1104 aa24.67■■□□□ 1.54
NECAB3-213ENST00000488489 EIF5BO60841 1220 aaKnown RBP24.65■■□□□ 1.54
NECAB3-213ENST00000488489 IL15P40933 162 aaPredicted RBP24.65■■□□□ 1.54
NECAB3-213ENST00000488489 CNTROBQ8N137 903 aa24.65■■□□□ 1.54
NECAB3-213ENST00000488489 LY75O60449 1722 aa24.65■■□□□ 1.54
NECAB3-213ENST00000488489 CTSWP56202 376 aa24.65■■□□□ 1.54
NECAB3-213ENST00000488489 RC3H1Q5TC82 1133 aaKnown RBP24.65■■□□□ 1.54
NECAB3-213ENST00000488489 BRWD3Q6RI45 1802 aa24.64■■□□□ 1.54
NECAB3-213ENST00000488489 MYH3P11055 1940 aa24.64■■□□□ 1.54
NECAB3-213ENST00000488489 FAM177BA6PVY3 158 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 981.2 ms