RNA–Protein interactions for RNA: ENST00000487897.5

PRKCD-206, Transcript of protein kinase C delta, humanhuman

TSL 4

Gene PRKCD, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-206ENST00000487897 GOLGA2Q08379 1002 aa21.79■■□□□ 1.08
PRKCD-206ENST00000487897 SOGA3Q5TF21 947 aa21.78■■□□□ 1.08
PRKCD-206ENST00000487897 RIC3Q7Z5B4 369 aa21.78■■□□□ 1.08
PRKCD-206ENST00000487897 ISCA1Q9BUE6 129 aa21.78■■□□□ 1.08
PRKCD-206ENST00000487897 STK31Q9BXU1 1019 aa21.78■■□□□ 1.08
PRKCD-206ENST00000487897 TRMT112Q9UI30 125 aaKnown RBP21.78■■□□□ 1.08
PRKCD-206ENST00000487897 NFKBIEO00221 500 aa21.77■■□□□ 1.08
PRKCD-206ENST00000487897 RASSF7Q02833 373 aa21.77■■□□□ 1.08
PRKCD-206ENST00000487897 C7orf43Q8WVR3 580 aa21.77■■□□□ 1.08
PRKCD-206ENST00000487897 NLRP3Q96P20 1036 aa21.77■■□□□ 1.08
PRKCD-206ENST00000487897 MYH16Q9H6N6 1097 aa21.77■■□□□ 1.08
PRKCD-206ENST00000487897 GPBP1L1Q9HC44 474 aaPredicted RBP21.77■■□□□ 1.08
PRKCD-206ENST00000487897 SPINK5Q9NQ38 1064 aaPredicted RBP21.77■■□□□ 1.08
PRKCD-206ENST00000487897 RNF181Q9P0P0 153 aa21.77■■□□□ 1.08
PRKCD-206ENST00000487897 ATP5J2-PTCD1G3V325 749 aa21.76■■□□□ 1.07
PRKCD-206ENST00000487897 DDX58O95786 925 aaKnown RBP21.76■■□□□ 1.07
PRKCD-206ENST00000487897 LMNB1P20700 586 aa21.76■■□□□ 1.07
PRKCD-206ENST00000487897 HOXA10P31260 410 aaPredicted RBP21.76■■□□□ 1.07
PRKCD-206ENST00000487897 TRIM28Q13263 835 aaKnown RBP21.76■■□□□ 1.07
PRKCD-206ENST00000487897 RPGRQ92834 1020 aaKnown RBP21.76■■□□□ 1.07
PRKCD-206ENST00000487897 SH3TC1Q8TE82 1336 aa21.76■■□□□ 1.07
PRKCD-206ENST00000487897 ZNF521Q96K83 1311 aa21.76■■□□□ 1.07
PRKCD-206ENST00000487897 EXOSC9Q06265 439 aaKnown RBP21.75■■□□□ 1.07
PRKCD-206ENST00000487897 ZNF526Q8TF50 670 aaPredicted RBP21.75■■□□□ 1.07
PRKCD-206ENST00000487897 SLX4Q8IY92 1834 aa21.75■■□□□ 1.07
PRKCD-206ENST00000487897 TCERG1O14776 1098 aaKnown RBP21.74■■□□□ 1.07
PRKCD-206ENST00000487897 VAMP4O75379 141 aa21.74■■□□□ 1.07
PRKCD-206ENST00000487897 C3orf67Q6ZVT6 689 aa21.74■■□□□ 1.07
PRKCD-206ENST00000487897 TNRC6CQ9HCJ0 1690 aaKnown RBP21.74■■□□□ 1.07
PRKCD-206ENST00000487897 ANKRD36CQ5JPF3 1778 aa21.74■■□□□ 1.07
PRKCD-206ENST00000487897 SLC4A2P04920 1241 aa21.73■■□□□ 1.07
PRKCD-206ENST00000487897 PRELPP51888 382 aa21.73■■□□□ 1.07
PRKCD-206ENST00000487897 SYNE4Q8N205 404 aa21.73■■□□□ 1.07
PRKCD-206ENST00000487897 RBM17Q96I25 401 aaKnown RBP21.73■■□□□ 1.07
PRKCD-206ENST00000487897 CRAMP1Q96RY5 1269 aa21.73■■□□□ 1.07
PRKCD-206ENST00000487897 HCLS1P14317 486 aaPredicted RBP21.72■■□□□ 1.07
PRKCD-206ENST00000487897 CCDC93Q567U6 631 aa21.72■■□□□ 1.07
PRKCD-206ENST00000487897 DIEXFQ68CQ4 756 aaKnown RBP21.72■■□□□ 1.07
PRKCD-206ENST00000487897 TAOK3Q9H2K8 898 aa21.72■■□□□ 1.07
PRKCD-206ENST00000487897 LTBP3Q9NS15 1303 aa21.72■■□□□ 1.07
PRKCD-206ENST00000487897 KSR2Q6VAB6 950 aa21.71■■□□□ 1.07
PRKCD-206ENST00000487897 ZNF428Q96B54 188 aa21.71■■□□□ 1.07
PRKCD-206ENST00000487897 MYD88Q99836 296 aa21.71■■□□□ 1.07
PRKCD-206ENST00000487897 METTL22Q9BUU2 404 aaPredicted RBP21.71■■□□□ 1.07
PRKCD-206ENST00000487897 ZC3H4Q9UPT8 1303 aaKnown RBP21.71■■□□□ 1.07
PRKCD-206ENST00000487897 ARFGEF2Q9Y6D5 1785 aa21.71■■□□□ 1.07
PRKCD-206ENST00000487897 RTKN2Q8IZC4 609 aa21.7■■□□□ 1.06
PRKCD-206ENST00000487897 FAM89AQ96GI7 184 aa21.7■■□□□ 1.06
PRKCD-206ENST00000487897 MAP3K2Q9Y2U5 619 aa21.7■■□□□ 1.06
PRKCD-206ENST00000487897 SBF1O95248 1867 aa21.69■■□□□ 1.06
PRKCD-206ENST00000487897 PI4KAP2A4QPH2 592 aa21.69■■□□□ 1.06
PRKCD-206ENST00000487897 CC2D2BQ6DHV5 1058 aa21.69■■□□□ 1.06
PRKCD-206ENST00000487897 OLFM4Q6UX06 510 aa21.69■■□□□ 1.06
PRKCD-206ENST00000487897 G2E3Q7L622 706 aa21.69■■□□□ 1.06
PRKCD-206ENST00000487897 PI4KAP1Q8N8J0 262 aa21.69■■□□□ 1.06
PRKCD-206ENST00000487897 CCDC191Q8NCU4 936 aa21.69■■□□□ 1.06
PRKCD-206ENST00000487897 FER1L6Q2WGJ9 1857 aa21.67■■□□□ 1.06
PRKCD-206ENST00000487897 FLIIQ13045 1269 aa21.67■■□□□ 1.06
PRKCD-206ENST00000487897 ZBTB38Q8NAP3 1195 aaPredicted RBP21.67■■□□□ 1.06
PRKCD-206ENST00000487897 KDM2BQ8NHM5 1336 aa21.66■■□□□ 1.06
PRKCD-206ENST00000487897 PPEF1O14829 653 aaPredicted RBP21.66■■□□□ 1.06
PRKCD-206ENST00000487897 FKBP4Q02790 459 aaKnown RBP eCLIP21.66■■□□□ 1.06
PRKCD-206ENST00000487897 GRIPAP1Q4V328 841 aa21.66■■□□□ 1.06
PRKCD-206ENST00000487897 RTL5Q5HYW3 569 aaPredicted RBP21.66■■□□□ 1.06
PRKCD-206ENST00000487897 CWC25Q9NXE8 425 aaPredicted RBP21.66■■□□□ 1.06
PRKCD-206ENST00000487897 CACNA1SQ13698 1873 aa21.66■■□□□ 1.06
PRKCD-206ENST00000487897 ABCC4O15439 1325 aa21.65■■□□□ 1.06
PRKCD-206ENST00000487897 E9PSI1 815 aa21.65■■□□□ 1.06
PRKCD-206ENST00000487897 IRS4O14654 1257 aaPredicted RBP21.65■■□□□ 1.06
PRKCD-206ENST00000487897 BBOX1O75936 387 aa21.65■■□□□ 1.06
PRKCD-206ENST00000487897 C1QTNF8P60827 252 aa21.65■■□□□ 1.06
PRKCD-206ENST00000487897 NEXNQ0ZGT2 675 aa21.65■■□□□ 1.06
PRKCD-206ENST00000487897 DDX46Q7L014 1031 aaKnown RBP21.65■■□□□ 1.06
PRKCD-206ENST00000487897 MIER1Q8N108 512 aa21.65■■□□□ 1.06
PRKCD-206ENST00000487897 PCCAP05165 728 aaPredicted RBP21.64■■□□□ 1.05
PRKCD-206ENST00000487897 HSP90B1P14625 803 aaKnown RBP21.64■■□□□ 1.05
PRKCD-206ENST00000487897 FKBP5Q13451 457 aaPredicted RBP21.64■■□□□ 1.05
PRKCD-206ENST00000487897 SF3B3Q15393 1217 aaKnown RBP21.64■■□□□ 1.05
PRKCD-206ENST00000487897 KIF3CO14782 793 aa21.63■■□□□ 1.05
PRKCD-206ENST00000487897 IGKV5-2P06315 115 aa21.63■■□□□ 1.05
PRKCD-206ENST00000487897 PSMD1Q99460 953 aa21.63■■□□□ 1.05
PRKCD-206ENST00000487897 TMX4Q9H1E5 349 aaPredicted RBP21.63■■□□□ 1.05
PRKCD-206ENST00000487897 NMRK2Q9NPI5 230 aa21.63■■□□□ 1.05
PRKCD-206ENST00000487897 ATP6V0A2Q9Y487 856 aa21.63■■□□□ 1.05
PRKCD-206ENST00000487897 GLTPD2A6NH11 291 aa21.62■■□□□ 1.05
PRKCD-206ENST00000487897 SLFN5Q08AF3 891 aa21.62■■□□□ 1.05
PRKCD-206ENST00000487897 ZNF277Q9NRM2 450 aaPredicted RBP21.62■■□□□ 1.05
PRKCD-206ENST00000487897 SNED1Q8TER0 1413 aa21.62■■□□□ 1.05
PRKCD-206ENST00000487897 GRAPQ13588 217 aa21.61■■□□□ 1.05
PRKCD-206ENST00000487897 DPY19L2Q6NUT2 758 aa21.61■■□□□ 1.05
PRKCD-206ENST00000487897 GRAPLQ8TC17 118 aaPredicted RBP21.61■■□□□ 1.05
PRKCD-206ENST00000487897 NEURL1BA8MQ27 555 aa21.6■■□□□ 1.05
PRKCD-206ENST00000487897 CWF19L2Q2TBE0 894 aaKnown RBP21.6■■□□□ 1.05
PRKCD-206ENST00000487897 SP8Q8IXZ3 490 aa21.6■■□□□ 1.05
PRKCD-206ENST00000487897 DNAAF4Q8WXU2 420 aa21.6■■□□□ 1.05
PRKCD-206ENST00000487897 IARSP41252 1262 aaKnown RBP21.59■■□□□ 1.05
PRKCD-206ENST00000487897 CCDC88AQ3V6T2 1871 aa21.59■■□□□ 1.05
PRKCD-206ENST00000487897 TMC4Q7Z404 712 aa21.59■■□□□ 1.05
PRKCD-206ENST00000487897 JARID2Q92833 1246 aaPredicted RBP21.59■■□□□ 1.05
PRKCD-206ENST00000487897 CDCA7LQ96GN5 454 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms