RNA–Protein interactions for RNA: ENST00000487701.1

SEC22C-215, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-215ENST00000487701 EMILIN1Q9Y6C2 1016 aa9.22□□□□□ -0.93
SEC22C-215ENST00000487701 ROCK2O75116 1388 aaKnown RBP9.22□□□□□ -0.93
SEC22C-215ENST00000487701 PXDNQ92626 1479 aa9.21□□□□□ -0.93
SEC22C-215ENST00000487701 COL22A1Q8NFW1 1626 aaPredicted RBP9.21□□□□□ -0.93
SEC22C-215ENST00000487701 SCARF1Q14162 830 aa9.21□□□□□ -0.94
SEC22C-215ENST00000487701 INTS6LQ5JSJ4 861 aaKnown RBP9.21□□□□□ -0.94
SEC22C-215ENST00000487701 PPP1R26Q5T8A7 1209 aaPredicted RBP9.21□□□□□ -0.94
SEC22C-215ENST00000487701 MRPL14Q6P1L8 145 aaKnown RBP9.21□□□□□ -0.94
SEC22C-215ENST00000487701 HIRIP3Q9BW71 556 aaPredicted RBP9.21□□□□□ -0.94
SEC22C-215ENST00000487701 TRPM3Q9HCF6 1732 aaPredicted RBP9.21□□□□□ -0.94
SEC22C-215ENST00000487701 CLSPNQ9HAW4 1339 aa9.21□□□□□ -0.94
SEC22C-215ENST00000487701 ANKARQ7Z5J8 1434 aa9.21□□□□□ -0.94
SEC22C-215ENST00000487701 ATP7BP35670 1465 aa9.21□□□□□ -0.94
SEC22C-215ENST00000487701 ABCA3Q99758 1704 aa9.2□□□□□ -0.94
SEC22C-215ENST00000487701 MARF1Q9Y4F3 1742 aaKnown RBP9.2□□□□□ -0.94
SEC22C-215ENST00000487701 PURBQ96QR8 312 aaKnown RBP9.2□□□□□ -0.94
SEC22C-215ENST00000487701 PRM3Q9NNZ6 103 aa9.2□□□□□ -0.94
SEC22C-215ENST00000487701 PGPEP1Q9NXJ5 209 aa9.2□□□□□ -0.94
SEC22C-215ENST00000487701 LRP6O75581 1613 aa9.2□□□□□ -0.94
SEC22C-215ENST00000487701 TERTO14746 1132 aaKnown RBP9.19□□□□□ -0.94
SEC22C-215ENST00000487701 DHX9Q08211 1270 aaKnown RBP9.19□□□□□ -0.94
SEC22C-215ENST00000487701 ESCO1Q5FWF5 840 aa9.19□□□□□ -0.94
SEC22C-215ENST00000487701 C6orf118Q5T5N4 469 aa9.19□□□□□ -0.94
SEC22C-215ENST00000487701 PRR36Q9H6K5 1346 aa9.19□□□□□ -0.94
SEC22C-215ENST00000487701 JCADQ9P266 1359 aa9.19□□□□□ -0.94
SEC22C-215ENST00000487701 ALS2Q96Q42 1657 aa9.19□□□□□ -0.94
SEC22C-215ENST00000487701 WASLO00401 505 aaPredicted RBP9.18□□□□□ -0.94
SEC22C-215ENST00000487701 WIPF1O43516 503 aa9.18□□□□□ -0.94
SEC22C-215ENST00000487701 UPP2O95045 317 aa9.18□□□□□ -0.94
SEC22C-215ENST00000487701 AKAP12Q02952 1782 aa9.18□□□□□ -0.94
SEC22C-215ENST00000487701 SOS2Q07890 1332 aaPredicted RBP9.18□□□□□ -0.94
SEC22C-215ENST00000487701 CCER1Q8TC90 406 aaPredicted RBP9.18□□□□□ -0.94
SEC22C-215ENST00000487701 ZFP42Q96MM3 310 aa9.18□□□□□ -0.94
SEC22C-215ENST00000487701 CENPJQ9HC77 1338 aaPredicted RBP9.18□□□□□ -0.94
SEC22C-215ENST00000487701 TBC1D2BQ9UPU7 963 aa9.18□□□□□ -0.94
SEC22C-215ENST00000487701 CRYBG1Q9Y4K1 1723 aa9.17□□□□□ -0.94
SEC22C-215ENST00000487701 PNPLA6Q8IY17 1366 aa9.17□□□□□ -0.94
SEC22C-215ENST00000487701 NR1H3Q13133 447 aa9.17□□□□□ -0.94
SEC22C-215ENST00000487701 LCE2CQ5TA81 110 aa9.17□□□□□ -0.94
SEC22C-215ENST00000487701 ZNF330Q9Y3S2 320 aaPredicted RBP9.17□□□□□ -0.94
SEC22C-215ENST00000487701 EIF3AQ14152 1382 aaKnown RBP9.16□□□□□ -0.94
SEC22C-215ENST00000487701 NPHP3Q7Z494 1330 aa9.16□□□□□ -0.94
SEC22C-215ENST00000487701 FOXO3O43524 673 aa9.16□□□□□ -0.94
SEC22C-215ENST00000487701 BMP2P12643 396 aa9.16□□□□□ -0.94
SEC22C-215ENST00000487701 XPCQ01831 940 aaPredicted RBP9.16□□□□□ -0.94
SEC22C-215ENST00000487701 MEIOBQ8N635 442 aa9.16□□□□□ -0.94
SEC22C-215ENST00000487701 DISP3Q9P2K9 1392 aa9.15□□□□□ -0.94
SEC22C-215ENST00000487701 GPR37L1O60883 481 aa9.15□□□□□ -0.94
SEC22C-215ENST00000487701 CBLBQ13191 982 aa9.15□□□□□ -0.94
SEC22C-215ENST00000487701 LINC00528Q8N1L1 170 aa9.15□□□□□ -0.94
SEC22C-215ENST00000487701 CDK19Q9BWU1 502 aa9.15□□□□□ -0.94
SEC22C-215ENST00000487701 CARD11Q9BXL7 1154 aa9.15□□□□□ -0.94
SEC22C-215ENST00000487701 PMFBP1Q8TBY8 1022 aa9.14□□□□□ -0.95
SEC22C-215ENST00000487701 MON2Q7Z3U7 1717 aa9.14□□□□□ -0.95
SEC22C-215ENST00000487701 SBNO2Q9Y2G9 1366 aa9.13□□□□□ -0.95
SEC22C-215ENST00000487701 SPATA31A6Q5VVP1 1343 aa9.13□□□□□ -0.95
SEC22C-215ENST00000487701 NRKQ7Z2Y5 1582 aa9.13□□□□□ -0.95
SEC22C-215ENST00000487701 ERVH48-1M5A8F1 160 aa9.13□□□□□ -0.95
SEC22C-215ENST00000487701 MCM6Q14566 821 aa9.13□□□□□ -0.95
SEC22C-215ENST00000487701 LRRC59Q96AG4 307 aaKnown RBP9.13□□□□□ -0.95
SEC22C-215ENST00000487701 NUDT16Q96DE0 195 aaKnown RBP9.13□□□□□ -0.95
SEC22C-215ENST00000487701 TMPRSS4Q9NRS4 437 aa9.13□□□□□ -0.95
SEC22C-215ENST00000487701 TIMELESSQ9UNS1 1208 aa9.13□□□□□ -0.95
SEC22C-215ENST00000487701 TNS3Q68CZ2 1445 aa9.13□□□□□ -0.95
SEC22C-215ENST00000487701 GIGYF1O75420 1035 aaPredicted RBP9.12□□□□□ -0.95
SEC22C-215ENST00000487701 ABL2P42684 1182 aa9.12□□□□□ -0.95
SEC22C-215ENST00000487701 SEPT12Q8IYM1 358 aa9.12□□□□□ -0.95
SEC22C-215ENST00000487701 ZNF784Q8NCA9 323 aaPredicted RBP9.12□□□□□ -0.95
SEC22C-215ENST00000487701 ZNF592Q92610 1267 aa9.12□□□□□ -0.95
SEC22C-215ENST00000487701 TSEN34Q9BSV6 310 aaKnown RBP9.12□□□□□ -0.95
SEC22C-215ENST00000487701 GDPD2Q9HCC8 539 aa9.12□□□□□ -0.95
SEC22C-215ENST00000487701 PPIP5K1Q6PFW1 1433 aa9.12□□□□□ -0.95
SEC22C-215ENST00000487701 PHRF1Q9P1Y6 1649 aaKnown RBP9.12□□□□□ -0.95
SEC22C-215ENST00000487701 POLR3AO14802 1390 aaPredicted RBP9.12□□□□□ -0.95
SEC22C-215ENST00000487701 USP47Q96K76 1375 aa9.12□□□□□ -0.95
SEC22C-215ENST00000487701 SPATA31A3Q5VYP0 1347 aa9.11□□□□□ -0.95
SEC22C-215ENST00000487701 MYOM1P52179 1685 aa9.11□□□□□ -0.95
SEC22C-215ENST00000487701 ESPNB1AK53 854 aa9.11□□□□□ -0.95
SEC22C-215ENST00000487701 INSM1Q01101 510 aaPredicted RBP9.11□□□□□ -0.95
SEC22C-215ENST00000487701 KRT28Q7Z3Y7 464 aa9.11□□□□□ -0.95
SEC22C-215ENST00000487701 RGS17Q9UGC6 210 aaPredicted RBP9.11□□□□□ -0.95
SEC22C-215ENST00000487701 SBNO1A3KN83 1393 aa9.11□□□□□ -0.95
SEC22C-215ENST00000487701 PIK3C2AO00443 1686 aa9.1□□□□□ -0.95
SEC22C-215ENST00000487701 PLCH1Q4KWH8 1693 aa9.1□□□□□ -0.95
SEC22C-215ENST00000487701 EVC2Q86UK5 1308 aa9.1□□□□□ -0.95
SEC22C-215ENST00000487701 SOBPA7XYQ1 873 aa9.1□□□□□ -0.95
SEC22C-215ENST00000487701 SRPK2P78362 688 aaKnown RBP9.1□□□□□ -0.95
SEC22C-215ENST00000487701 TESK2Q96S53 571 aa9.1□□□□□ -0.95
SEC22C-215ENST00000487701 CYLDQ9NQC7 956 aa9.1□□□□□ -0.95
SEC22C-215ENST00000487701 NXF1Q9UBU9 619 aaKnown RBP9.1□□□□□ -0.95
SEC22C-215ENST00000487701 ACEP12821 1306 aa9.09□□□□□ -0.95
SEC22C-215ENST00000487701 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.09□□□□□ -0.95
SEC22C-215ENST00000487701 MAN1A2O60476 641 aa9.09□□□□□ -0.95
SEC22C-215ENST00000487701 MCCD1P59942 119 aaPredicted RBP9.09□□□□□ -0.95
SEC22C-215ENST00000487701 RELBQ01201 579 aa9.09□□□□□ -0.95
SEC22C-215ENST00000487701 PSME1Q06323 249 aa9.09□□□□□ -0.95
SEC22C-215ENST00000487701 TMEM132AQ24JP5 1023 aa9.09□□□□□ -0.95
SEC22C-215ENST00000487701 Q6ZVU0 165 aa9.09□□□□□ -0.95
SEC22C-215ENST00000487701 NGDNQ8NEJ9 315 aaKnown RBP9.09□□□□□ -0.95
SEC22C-215ENST00000487701 AGBL1Q96MI9 1066 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms