RNA–Protein interactions for RNA: ENST00000487602.5

RBM28-206, Transcript of RNA binding motif protein 28, humanhuman

TSL 5

Gene RBM28, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-206ENST00000487602 RWDD1Q9H446 243 aaPredicted RBP10.04□□□□□ -0.8
RBM28-206ENST00000487602 LRRFIP2Q9Y608 721 aaKnown RBP10.04□□□□□ -0.8
RBM28-206ENST00000487602 C4AP0C0L4 1744 aa10.04□□□□□ -0.8
RBM28-206ENST00000487602 SCN7AQ01118 1682 aa10.03□□□□□ -0.8
RBM28-206ENST00000487602 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.03□□□□□ -0.8
RBM28-206ENST00000487602 ZPR1O75312 459 aa10.03□□□□□ -0.8
RBM28-206ENST00000487602 SSFA2P28290 1259 aa10.03□□□□□ -0.8
RBM28-206ENST00000487602 RFC4P35249 363 aa10.03□□□□□ -0.8
RBM28-206ENST00000487602 CASP7P55210 303 aa10.03□□□□□ -0.8
RBM28-206ENST00000487602 ATP8B2P98198 1209 aa10.03□□□□□ -0.8
RBM28-206ENST00000487602 HDAC1Q13547 482 aaPredicted RBP10.03□□□□□ -0.8
RBM28-206ENST00000487602 CEP85Q6P2H3 762 aa10.03□□□□□ -0.8
RBM28-206ENST00000487602 NLRP10Q86W26 655 aa10.03□□□□□ -0.8
RBM28-206ENST00000487602 SIRT2Q8IXJ6 389 aa10.03□□□□□ -0.8
RBM28-206ENST00000487602 ANKRD44Q8N8A2 993 aa10.03□□□□□ -0.8
RBM28-206ENST00000487602 BCL2L12Q9HB09 334 aa10.03□□□□□ -0.8
RBM28-206ENST00000487602 ZNF652Q9Y2D9 606 aa10.03□□□□□ -0.8
RBM28-206ENST00000487602 BCORQ6W2J9 1755 aa10.03□□□□□ -0.8
RBM28-206ENST00000487602 ARFGEF2Q9Y6D5 1785 aa10.03□□□□□ -0.8
RBM28-206ENST00000487602 UBR3Q6ZT12 1888 aa10.02□□□□□ -0.8
RBM28-206ENST00000487602 PHF14O94880 888 aa10.02□□□□□ -0.81
RBM28-206ENST00000487602 PCCAP05165 728 aaPredicted RBP10.02□□□□□ -0.81
RBM28-206ENST00000487602 GPTP24298 496 aa10.02□□□□□ -0.81
RBM28-206ENST00000487602 ZNF827Q17R98 1081 aa10.02□□□□□ -0.81
RBM28-206ENST00000487602 PARP10Q53GL7 1025 aa10.02□□□□□ -0.81
RBM28-206ENST00000487602 USPL1Q5W0Q7 1092 aa10.02□□□□□ -0.81
RBM28-206ENST00000487602 CENPQQ7L2Z9 268 aaPredicted RBP10.02□□□□□ -0.81
RBM28-206ENST00000487602 DEFB132Q7Z7B7 95 aa10.02□□□□□ -0.81
RBM28-206ENST00000487602 JARID2Q92833 1246 aaPredicted RBP10.02□□□□□ -0.81
RBM28-206ENST00000487602 SRP68Q9UHB9 627 aaKnown RBP10.02□□□□□ -0.81
RBM28-206ENST00000487602 KDM2BQ8NHM5 1336 aa10.02□□□□□ -0.81
RBM28-206ENST00000487602 HMMRO75330 724 aa10.01□□□□□ -0.81
RBM28-206ENST00000487602 UBE3BQ7Z3V4 1068 aa10.01□□□□□ -0.81
RBM28-206ENST00000487602 ZBTB38Q8NAP3 1195 aaPredicted RBP10.01□□□□□ -0.81
RBM28-206ENST00000487602 FLAD1Q8NFF5 587 aa10.01□□□□□ -0.81
RBM28-206ENST00000487602 KAZALD1Q96I82 304 aa10.01□□□□□ -0.81
RBM28-206ENST00000487602 SUCLG2Q96I99 432 aa10.01□□□□□ -0.81
RBM28-206ENST00000487602 TFCP2L1Q9NZI6 479 aa10.01□□□□□ -0.81
RBM28-206ENST00000487602 NIP7Q9Y221 180 aaKnown RBP eCLIP10.01□□□□□ -0.81
RBM28-206ENST00000487602 UBN2Q6ZU65 1347 aa10.01□□□□□ -0.81
RBM28-206ENST00000487602 USP42Q9H9J4 1324 aaKnown RBP10.01□□□□□ -0.81
RBM28-206ENST00000487602 MTX1Q13505 466 aa10□□□□□ -0.81
RBM28-206ENST00000487602 SLC15A2Q16348 729 aa10□□□□□ -0.81
RBM28-206ENST00000487602 SUSD4Q5VX71 490 aa10□□□□□ -0.81
RBM28-206ENST00000487602 PPP1R42Q7Z4L9 355 aa10□□□□□ -0.81
RBM28-206ENST00000487602 UTP14AQ9BVJ6 771 aaKnown RBP10□□□□□ -0.81
RBM28-206ENST00000487602 TRMT112Q9UI30 125 aaKnown RBP10□□□□□ -0.81
RBM28-206ENST00000487602 ANKRD36CQ5JPF3 1778 aa10□□□□□ -0.81
RBM28-206ENST00000487602 NUP98P52948 1817 aa10□□□□□ -0.81
RBM28-206ENST00000487602 PNMA6EA0A0J9YXQ4 647 aa9.99□□□□□ -0.81
RBM28-206ENST00000487602 POLA2Q14181 598 aa9.99□□□□□ -0.81
RBM28-206ENST00000487602 RABL6Q3YEC7 729 aaPredicted RBP9.99□□□□□ -0.81
RBM28-206ENST00000487602 RTL5Q5HYW3 569 aaPredicted RBP9.99□□□□□ -0.81
RBM28-206ENST00000487602 EPHA10Q5JZY3 1008 aa9.99□□□□□ -0.81
RBM28-206ENST00000487602 TBC1D9BQ66K14 1250 aa9.99□□□□□ -0.81
RBM28-206ENST00000487602 COL23A1Q86Y22 540 aaPredicted RBP9.99□□□□□ -0.81
RBM28-206ENST00000487602 SSH3Q8TE77 659 aa9.99□□□□□ -0.81
RBM28-206ENST00000487602 FAM89AQ96GI7 184 aa9.99□□□□□ -0.81
RBM28-206ENST00000487602 PLA2G12BQ9BX93 195 aa9.99□□□□□ -0.81
RBM28-206ENST00000487602 BICC1Q9H694 974 aaKnown RBP9.99□□□□□ -0.81
RBM28-206ENST00000487602 DCTPP1Q9H773 170 aa9.99□□□□□ -0.81
RBM28-206ENST00000487602 STK32BQ9NY57 414 aa9.99□□□□□ -0.81
RBM28-206ENST00000487602 CDHR2Q9BYE9 1310 aa9.99□□□□□ -0.81
RBM28-206ENST00000487602 IRS4O14654 1257 aaPredicted RBP9.98□□□□□ -0.81
RBM28-206ENST00000487602 NTSR2O95665 410 aa9.98□□□□□ -0.81
RBM28-206ENST00000487602 GYS1P13807 737 aa9.98□□□□□ -0.81
RBM28-206ENST00000487602 FOXO4P98177 505 aa9.98□□□□□ -0.81
RBM28-206ENST00000487602 BICDL1Q6ZP65 573 aa9.98□□□□□ -0.81
RBM28-206ENST00000487602 SMC5Q8IY18 1101 aa9.98□□□□□ -0.81
RBM28-206ENST00000487602 SYNE4Q8N205 404 aa9.98□□□□□ -0.81
RBM28-206ENST00000487602 UPF1Q92900 1129 aaKnown RBP eCLIP9.98□□□□□ -0.81
RBM28-206ENST00000487602 GCC1Q96CN9 775 aa9.98□□□□□ -0.81
RBM28-206ENST00000487602 SETDB2Q96T68 719 aa9.98□□□□□ -0.81
RBM28-206ENST00000487602 ANO8Q9HCE9 1232 aaPredicted RBP9.98□□□□□ -0.81
RBM28-206ENST00000487602 PNPLA7Q6ZV29 1317 aa9.98□□□□□ -0.81
RBM28-206ENST00000487602 FAM177BA6PVY3 158 aa9.97□□□□□ -0.81
RBM28-206ENST00000487602 SRGAP3O43295 1099 aa9.97□□□□□ -0.81
RBM28-206ENST00000487602 PDE8AO60658 829 aa9.97□□□□□ -0.81
RBM28-206ENST00000487602 TM4SF1P30408 202 aa9.97□□□□□ -0.81
RBM28-206ENST00000487602 NFIXQ14938 502 aa9.97□□□□□ -0.81
RBM28-206ENST00000487602 LMBR1LQ6UX01 489 aa9.97□□□□□ -0.81
RBM28-206ENST00000487602 AFDNP55196 1824 aaKnown RBP9.97□□□□□ -0.81
RBM28-206ENST00000487602 SH3TC1Q8TE82 1336 aa9.97□□□□□ -0.81
RBM28-206ENST00000487602 CSF1RP07333 972 aa9.96□□□□□ -0.82
RBM28-206ENST00000487602 HSP90B1P14625 803 aaKnown RBP9.96□□□□□ -0.82
RBM28-206ENST00000487602 SLC10A5Q5PT55 438 aa9.96□□□□□ -0.82
RBM28-206ENST00000487602 TPTE2Q6XPS3 522 aa9.96□□□□□ -0.82
RBM28-206ENST00000487602 NLGN1Q8N2Q7 840 aa9.96□□□□□ -0.82
RBM28-206ENST00000487602 NYXQ9GZU5 481 aa9.96□□□□□ -0.82
RBM28-206ENST00000487602 PDZRN3Q9UPQ7 1066 aa9.96□□□□□ -0.82
RBM28-206ENST00000487602 HCLS1P14317 486 aaPredicted RBP9.95□□□□□ -0.82
RBM28-206ENST00000487602 RFX5P48382 616 aaPredicted RBP9.95□□□□□ -0.82
RBM28-206ENST00000487602 ERFEQ4G0M1 354 aa9.95□□□□□ -0.82
RBM28-206ENST00000487602 ILDR2Q71H61 639 aa9.95□□□□□ -0.82
RBM28-206ENST00000487602 NBPF5PQ86XG9 351 aaPredicted RBP9.95□□□□□ -0.82
RBM28-206ENST00000487602 NUTM1Q86Y26 1132 aa9.95□□□□□ -0.82
RBM28-206ENST00000487602 TTLL11Q8NHH1 800 aa9.95□□□□□ -0.82
RBM28-206ENST00000487602 NOP58Q9Y2X3 529 aaKnown RBP9.95□□□□□ -0.82
RBM28-206ENST00000487602 CASZ1Q86V15 1759 aa9.94□□□□□ -0.82
RBM28-206ENST00000487602 COL24A1Q17RW2 1714 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms