RNA–Protein interactions for RNA: ENST00000487481.1

NME1-208, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 2

Gene NME1, Length 987 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-208ENST00000487481 TSKSQ9UJT2 592 aa20.46■□□□□ 0.87
NME1-208ENST00000487481 CASP8AP2Q9UKL3 1982 aa20.45■□□□□ 0.86
NME1-208ENST00000487481 PRAMEF22A3QJZ6 481 aa20.45■□□□□ 0.86
NME1-208ENST00000487481 TRAF5O00463 557 aa20.45■□□□□ 0.86
NME1-208ENST00000487481 GTF2E1P29083 439 aaPredicted RBP20.45■□□□□ 0.86
NME1-208ENST00000487481 GRIPAP1Q4V328 841 aa20.45■□□□□ 0.86
NME1-208ENST00000487481 MCOLN1Q9GZU1 580 aa20.45■□□□□ 0.86
NME1-208ENST00000487481 LARGE2Q8N3Y3 721 aa20.44■□□□□ 0.86
NME1-208ENST00000487481 ABCC12Q96J65 1359 aa20.44■□□□□ 0.86
NME1-208ENST00000487481 NBPF26B4DH59 902 aa20.43■□□□□ 0.86
NME1-208ENST00000487481 AOC2O75106 756 aa20.43■□□□□ 0.86
NME1-208ENST00000487481 NBPF10Q6P3W6 841 aaKnown RBP20.43■□□□□ 0.86
NME1-208ENST00000487481 NBPF15Q8N660 670 aa20.43■□□□□ 0.86
NME1-208ENST00000487481 CFAP44Q96MT7 982 aa20.43■□□□□ 0.86
NME1-208ENST00000487481 NYXQ9GZU5 481 aa20.43■□□□□ 0.86
NME1-208ENST00000487481 RIC1Q4ADV7 1423 aa20.43■□□□□ 0.86
NME1-208ENST00000487481 TNRC18O15417 2968 aaPredicted RBP20.42■□□□□ 0.86
NME1-208ENST00000487481 BRPF1P55201 1214 aaPredicted RBP20.42■□□□□ 0.86
NME1-208ENST00000487481 SAPCD2Q86UD0 394 aa20.42■□□□□ 0.86
NME1-208ENST00000487481 HHIPL1Q96JK4 782 aa20.42■□□□□ 0.86
NME1-208ENST00000487481 LAMB4A4D0S4 1761 aa20.41■□□□□ 0.86
NME1-208ENST00000487481 HLFQ16534 295 aa20.41■□□□□ 0.86
NME1-208ENST00000487481 CC2D1BQ5T0F9 858 aaKnown RBP20.41■□□□□ 0.86
NME1-208ENST00000487481 NIM1KQ8IY84 436 aa20.41■□□□□ 0.86
NME1-208ENST00000487481 ADARB2Q9NS39 739 aaKnown RBP20.41■□□□□ 0.86
NME1-208ENST00000487481 HOXA10P31260 410 aaPredicted RBP20.4■□□□□ 0.86
NME1-208ENST00000487481 KIF7Q2M1P5 1343 aa20.4■□□□□ 0.86
NME1-208ENST00000487481 RPGRQ92834 1020 aaKnown RBP20.4■□□□□ 0.86
NME1-208ENST00000487481 NUP98P52948 1817 aa20.39■□□□□ 0.86
NME1-208ENST00000487481 IBTKQ9P2D0 1353 aaPredicted RBP20.39■□□□□ 0.85
NME1-208ENST00000487481 PER1O15534 1290 aaPredicted RBP20.39■□□□□ 0.85
NME1-208ENST00000487481 CELF2O95319 508 aaKnown RBP20.39■□□□□ 0.85
NME1-208ENST00000487481 PHACTR3Q96KR7 559 aa20.39■□□□□ 0.85
NME1-208ENST00000487481 GPRC5DQ9NZD1 345 aa20.39■□□□□ 0.85
NME1-208ENST00000487481 PRKAR2BP31323 418 aa20.38■□□□□ 0.85
NME1-208ENST00000487481 NUTM1Q86Y26 1132 aa20.38■□□□□ 0.85
NME1-208ENST00000487481 DGKZQ13574 1117 aa20.37■□□□□ 0.85
NME1-208ENST00000487481 RTF1Q92541 710 aaKnown RBP20.37■□□□□ 0.85
NME1-208ENST00000487481 RSPH6AQ9H0K4 717 aa20.37■□□□□ 0.85
NME1-208ENST00000487481 NPC1L1Q9UHC9 1359 aa20.36■□□□□ 0.85
NME1-208ENST00000487481 ERVV-1B6SEH8 477 aa20.36■□□□□ 0.85
NME1-208ENST00000487481 PPEF1O14829 653 aaPredicted RBP20.36■□□□□ 0.85
NME1-208ENST00000487481 PPIP5K2O43314 1243 aa20.36■□□□□ 0.85
NME1-208ENST00000487481 TRIM26Q12899 539 aaPredicted RBP20.36■□□□□ 0.85
NME1-208ENST00000487481 CRAMP1Q96RY5 1269 aa20.36■□□□□ 0.85
NME1-208ENST00000487481 RBM17Q96I25 401 aaKnown RBP20.35■□□□□ 0.85
NME1-208ENST00000487481 VPS33BQ9H267 617 aa20.35■□□□□ 0.85
NME1-208ENST00000487481 CDHR2Q9BYE9 1310 aa20.34■□□□□ 0.85
NME1-208ENST00000487481 CIAPIN1Q6FI81 312 aa20.34■□□□□ 0.85
NME1-208ENST00000487481 MCM10Q7L590 875 aa20.34■□□□□ 0.85
NME1-208ENST00000487481 GLIS2Q9BZE0 524 aaPredicted RBP20.34■□□□□ 0.85
NME1-208ENST00000487481 PGAP2Q9UHJ9 254 aa20.34■□□□□ 0.85
NME1-208ENST00000487481 MAP3K15Q6ZN16 1313 aa20.33■□□□□ 0.85
NME1-208ENST00000487481 NOGQ13253 232 aa20.33■□□□□ 0.85
NME1-208ENST00000487481 AOC3Q16853 763 aa20.33■□□□□ 0.85
NME1-208ENST00000487481 ZC3H15Q8WU90 426 aaKnown RBP20.33■□□□□ 0.85
NME1-208ENST00000487481 SLC51AQ86UW1 340 aa20.32■□□□□ 0.84
NME1-208ENST00000487481 TMX4Q9H1E5 349 aaPredicted RBP20.32■□□□□ 0.84
NME1-208ENST00000487481 ZNRF3Q9ULT6 936 aa20.32■□□□□ 0.84
NME1-208ENST00000487481 UBN2Q6ZU65 1347 aa20.31■□□□□ 0.84
NME1-208ENST00000487481 GMPSP49915 693 aaPredicted RBP20.31■□□□□ 0.84
NME1-208ENST00000487481 CXCL9Q07325 125 aa20.31■□□□□ 0.84
NME1-208ENST00000487481 KIF6Q6ZMV9 814 aa20.31■□□□□ 0.84
NME1-208ENST00000487481 ZNF408Q9H9D4 720 aa20.31■□□□□ 0.84
NME1-208ENST00000487481 TCERG1O14776 1098 aaKnown RBP20.3■□□□□ 0.84
NME1-208ENST00000487481 HTATSF1O43719 755 aaKnown RBP20.3■□□□□ 0.84
NME1-208ENST00000487481 SUPT20HQ8NEM7 779 aa20.3■□□□□ 0.84
NME1-208ENST00000487481 ATP6V0A2Q9Y487 856 aa20.3■□□□□ 0.84
NME1-208ENST00000487481 GPTP24298 496 aa20.29■□□□□ 0.84
NME1-208ENST00000487481 SUSD4Q5VX71 490 aa20.29■□□□□ 0.84
NME1-208ENST00000487481 CDC37L1Q7L3B6 337 aa20.29■□□□□ 0.84
NME1-208ENST00000487481 NGEFQ8N5V2 710 aa20.29■□□□□ 0.84
NME1-208ENST00000487481 CFAP53Q96M91 514 aa20.29■□□□□ 0.84
NME1-208ENST00000487481 RTFDC1Q9BY42 306 aaPredicted RBP20.29■□□□□ 0.84
NME1-208ENST00000487481 NTSR2O95665 410 aa20.28■□□□□ 0.84
NME1-208ENST00000487481 DCTN1Q14203 1278 aa20.28■□□□□ 0.84
NME1-208ENST00000487481 TAF7Q15545 349 aaPredicted RBP20.28■□□□□ 0.84
NME1-208ENST00000487481 KDM3BQ7LBC6 1761 aa20.28■□□□□ 0.84
NME1-208ENST00000487481 TTLL7Q6ZT98 887 aa20.27■□□□□ 0.84
NME1-208ENST00000487481 BCL2L13Q9BXK5 485 aa20.27■□□□□ 0.84
NME1-208ENST00000487481 SAGE1Q9NXZ1 904 aa20.27■□□□□ 0.84
NME1-208ENST00000487481 NUDCQ9Y266 331 aa20.27■□□□□ 0.84
NME1-208ENST00000487481 HIRAP54198 1017 aaPredicted RBP20.26■□□□□ 0.83
NME1-208ENST00000487481 HUNKP57058 714 aa20.26■□□□□ 0.83
NME1-208ENST00000487481 TNIP1Q15025 636 aa20.26■□□□□ 0.83
NME1-208ENST00000487481 C3orf67Q6ZVT6 689 aa20.26■□□□□ 0.83
NME1-208ENST00000487481 ZNF34Q8IZ26 560 aa20.26■□□□□ 0.83
NME1-208ENST00000487481 TRPM4Q8TD43 1214 aa20.26■□□□□ 0.83
NME1-208ENST00000487481 NLRP3Q96P20 1036 aa20.26■□□□□ 0.83
NME1-208ENST00000487481 ZIC5Q96T25 663 aa20.26■□□□□ 0.83
NME1-208ENST00000487481 KIAA2012Q0VF49 1180 aa20.25■□□□□ 0.83
NME1-208ENST00000487481 PPP1R42Q7Z4L9 355 aa20.25■□□□□ 0.83
NME1-208ENST00000487481 ZBTB3Q9H5J0 574 aa20.25■□□□□ 0.83
NME1-208ENST00000487481 U2AF1L5P0DN76 240 aaPredicted RBP20.24■□□□□ 0.83
NME1-208ENST00000487481 U2AF1Q01081 240 aaKnown RBP eCLIP20.24■□□□□ 0.83
NME1-208ENST00000487481 CNGB1Q14028 1251 aaPredicted RBP20.24■□□□□ 0.83
NME1-208ENST00000487481 PARP10Q53GL7 1025 aa20.24■□□□□ 0.83
NME1-208ENST00000487481 DPP8Q6V1X1 898 aaPredicted RBP20.24■□□□□ 0.83
NME1-208ENST00000487481 PCGF6Q9BYE7 350 aa20.24■□□□□ 0.83
NME1-208ENST00000487481 RRP7AQ9Y3A4 280 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms