RNA–Protein interactions for RNA: ENST00000487275.1

ZNF541-204, Transcript of zinc finger protein 541, humanhuman

TSL 3

Gene ZNF541, Length 579 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-204ENST00000487275 OS9Q13438 667 aaPredicted RBP9.95□□□□□ -0.82
ZNF541-204ENST00000487275 TXNRD1Q16881 649 aa9.95□□□□□ -0.82
ZNF541-204ENST00000487275 PARP10Q53GL7 1025 aa9.95□□□□□ -0.82
ZNF541-204ENST00000487275 RTL5Q5HYW3 569 aaPredicted RBP9.95□□□□□ -0.82
ZNF541-204ENST00000487275 EPHA10Q5JZY3 1008 aa9.95□□□□□ -0.82
ZNF541-204ENST00000487275 ZNF34Q8IZ26 560 aa9.95□□□□□ -0.82
ZNF541-204ENST00000487275 BCL11AQ9H165 835 aa9.95□□□□□ -0.82
ZNF541-204ENST00000487275 LRRC4BQ9NT99 713 aa9.95□□□□□ -0.82
ZNF541-204ENST00000487275 MYH14Q7Z406 1995 aaKnown RBP9.95□□□□□ -0.82
ZNF541-204ENST00000487275 CDHR2Q9BYE9 1310 aa9.94□□□□□ -0.82
ZNF541-204ENST00000487275 PLSCR1O15162 318 aa9.94□□□□□ -0.82
ZNF541-204ENST00000487275 SMARCA5O60264 1052 aaPredicted RBP9.94□□□□□ -0.82
ZNF541-204ENST00000487275 ZPR1O75312 459 aa9.94□□□□□ -0.82
ZNF541-204ENST00000487275 PHF14O94880 888 aa9.94□□□□□ -0.82
ZNF541-204ENST00000487275 RABL6Q3YEC7 729 aaPredicted RBP9.94□□□□□ -0.82
ZNF541-204ENST00000487275 TRAPPC3LQ5T215 181 aa9.94□□□□□ -0.82
ZNF541-204ENST00000487275 CLEC4GQ6UXB4 293 aa9.94□□□□□ -0.82
ZNF541-204ENST00000487275 LRRCC1Q9C099 1032 aa9.94□□□□□ -0.82
ZNF541-204ENST00000487275 NARFQ9UHQ1 456 aa9.94□□□□□ -0.82
ZNF541-204ENST00000487275 TRMT112Q9UI30 125 aaKnown RBP9.94□□□□□ -0.82
ZNF541-204ENST00000487275 NIP7Q9Y221 180 aaKnown RBP eCLIP9.94□□□□□ -0.82
ZNF541-204ENST00000487275 CHMP3Q9Y3E7 222 aa9.94□□□□□ -0.82
ZNF541-204ENST00000487275 C4BP0C0L5 1744 aa9.93□□□□□ -0.82
ZNF541-204ENST00000487275 UBN2Q6ZU65 1347 aa9.93□□□□□ -0.82
ZNF541-204ENST00000487275 ADRA2BP18089 450 aa9.93□□□□□ -0.82
ZNF541-204ENST00000487275 RFC4P35249 363 aa9.93□□□□□ -0.82
ZNF541-204ENST00000487275 FOXO4P98177 505 aa9.93□□□□□ -0.82
ZNF541-204ENST00000487275 G3BP1Q13283 466 aaKnown RBP eCLIP9.93□□□□□ -0.82
ZNF541-204ENST00000487275 SUSD4Q5VX71 490 aa9.93□□□□□ -0.82
ZNF541-204ENST00000487275 USPL1Q5W0Q7 1092 aa9.93□□□□□ -0.82
ZNF541-204ENST00000487275 LMBR1LQ6UX01 489 aa9.93□□□□□ -0.82
ZNF541-204ENST00000487275 SMIM5Q71RC9 77 aa9.93□□□□□ -0.82
ZNF541-204ENST00000487275 ERC1Q8IUD2 1116 aa9.93□□□□□ -0.82
ZNF541-204ENST00000487275 ARHGEF1Q92888 912 aaKnown RBP9.93□□□□□ -0.82
ZNF541-204ENST00000487275 KIF1BPQ96EK5 621 aa9.93□□□□□ -0.82
ZNF541-204ENST00000487275 FAM89AQ96GI7 184 aa9.93□□□□□ -0.82
ZNF541-204ENST00000487275 UTP14AQ9BVJ6 771 aaKnown RBP9.93□□□□□ -0.82
ZNF541-204ENST00000487275 NOP58Q9Y2X3 529 aaKnown RBP9.93□□□□□ -0.82
ZNF541-204ENST00000487275 SH3TC1Q8TE82 1336 aa9.92□□□□□ -0.82
ZNF541-204ENST00000487275 FAM177BA6PVY3 158 aa9.92□□□□□ -0.82
ZNF541-204ENST00000487275 IRS4O14654 1257 aaPredicted RBP9.92□□□□□ -0.82
ZNF541-204ENST00000487275 HSP90B1P14625 803 aaKnown RBP9.92□□□□□ -0.82
ZNF541-204ENST00000487275 RHPN1Q8TCX5 695 aa9.92□□□□□ -0.82
ZNF541-204ENST00000487275 PLA2G12BQ9BX93 195 aa9.92□□□□□ -0.82
ZNF541-204ENST00000487275 SRP68Q9UHB9 627 aaKnown RBP9.92□□□□□ -0.82
ZNF541-204ENST00000487275 PA2G4Q9UQ80 394 aaKnown RBP9.92□□□□□ -0.82
ZNF541-204ENST00000487275 ANKRD36CQ5JPF3 1778 aa9.92□□□□□ -0.82
ZNF541-204ENST00000487275 NUP98P52948 1817 aa9.91□□□□□ -0.82
ZNF541-204ENST00000487275 TAF1LQ8IZX4 1826 aa9.91□□□□□ -0.82
ZNF541-204ENST00000487275 SSFA2P28290 1259 aa9.91□□□□□ -0.82
ZNF541-204ENST00000487275 FAM161AQ3B820 660 aa9.91□□□□□ -0.82
ZNF541-204ENST00000487275 BICDL1Q6ZP65 573 aa9.91□□□□□ -0.82
ZNF541-204ENST00000487275 PROM2Q8N271 834 aa9.91□□□□□ -0.82
ZNF541-204ENST00000487275 SIL1Q9H173 461 aa9.91□□□□□ -0.82
ZNF541-204ENST00000487275 BCL2L12Q9HB09 334 aa9.91□□□□□ -0.82
ZNF541-204ENST00000487275 COPRSQ9NQ92 184 aa9.91□□□□□ -0.82
ZNF541-204ENST00000487275 TSHZ2Q9NRE2 1034 aa9.91□□□□□ -0.82
ZNF541-204ENST00000487275 BCORQ6W2J9 1755 aa9.91□□□□□ -0.82
ZNF541-204ENST00000487275 USP42Q9H9J4 1324 aaKnown RBP9.9□□□□□ -0.82
ZNF541-204ENST00000487275 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.9□□□□□ -0.82
ZNF541-204ENST00000487275 PDE8AO60658 829 aa9.9□□□□□ -0.82
ZNF541-204ENST00000487275 NTSR2O95665 410 aa9.9□□□□□ -0.82
ZNF541-204ENST00000487275 RFX5P48382 616 aaPredicted RBP9.9□□□□□ -0.82
ZNF541-204ENST00000487275 CTSWP56202 376 aa9.9□□□□□ -0.82
ZNF541-204ENST00000487275 SF3B2Q13435 895 aaKnown RBP9.9□□□□□ -0.82
ZNF541-204ENST00000487275 CCDC57Q2TAC2 916 aa9.9□□□□□ -0.82
ZNF541-204ENST00000487275 TAF7LQ5H9L4 462 aa9.9□□□□□ -0.82
ZNF541-204ENST00000487275 TBC1D9BQ66K14 1250 aa9.9□□□□□ -0.82
ZNF541-204ENST00000487275 AMIGO3Q86WK7 504 aa9.9□□□□□ -0.82
ZNF541-204ENST00000487275 PLEKHM2Q8IWE5 1019 aa9.9□□□□□ -0.82
ZNF541-204ENST00000487275 C16orf71Q8IYS4 520 aaPredicted RBP9.9□□□□□ -0.82
ZNF541-204ENST00000487275 SYNE4Q8N205 404 aa9.9□□□□□ -0.82
ZNF541-204ENST00000487275 KLHDC4Q8TBB5 520 aa9.9□□□□□ -0.82
ZNF541-204ENST00000487275 SETDB2Q96T68 719 aa9.9□□□□□ -0.82
ZNF541-204ENST00000487275 IL1RAPL2Q9NP60 686 aa9.9□□□□□ -0.82
ZNF541-204ENST00000487275 SCN7AQ01118 1682 aa9.9□□□□□ -0.83
ZNF541-204ENST00000487275 CSF1RP07333 972 aa9.89□□□□□ -0.83
ZNF541-204ENST00000487275 GTF2E1P29083 439 aaPredicted RBP9.89□□□□□ -0.83
ZNF541-204ENST00000487275 PTPN12Q05209 780 aaKnown RBP9.89□□□□□ -0.83
ZNF541-204ENST00000487275 IFIT5Q13325 482 aaKnown RBP9.89□□□□□ -0.83
ZNF541-204ENST00000487275 ILDR1Q86SU0 546 aaPredicted RBP9.89□□□□□ -0.83
ZNF541-204ENST00000487275 CLASRPQ8N2M8 674 aaKnown RBP9.89□□□□□ -0.83
ZNF541-204ENST00000487275 CCDC85AQ96PX6 553 aaPredicted RBP9.89□□□□□ -0.83
ZNF541-204ENST00000487275 NYXQ9GZU5 481 aa9.89□□□□□ -0.83
ZNF541-204ENST00000487275 TFCP2L1Q9NZI6 479 aa9.89□□□□□ -0.83
ZNF541-204ENST00000487275 ANKRD18BA2A2Z9 1011 aa9.88□□□□□ -0.83
ZNF541-204ENST00000487275 NPHP1O15259 732 aa9.88□□□□□ -0.83
ZNF541-204ENST00000487275 HCLS1P14317 486 aaPredicted RBP9.88□□□□□ -0.83
ZNF541-204ENST00000487275 NBPF5PQ86XG9 351 aaPredicted RBP9.88□□□□□ -0.83
ZNF541-204ENST00000487275 NUTM1Q86Y26 1132 aa9.88□□□□□ -0.83
ZNF541-204ENST00000487275 TTLL11Q8NHH1 800 aa9.88□□□□□ -0.83
ZNF541-204ENST00000487275 OTUD7AQ8TE49 926 aaPredicted RBP9.88□□□□□ -0.83
ZNF541-204ENST00000487275 BACH2Q9BYV9 841 aa9.88□□□□□ -0.83
ZNF541-204ENST00000487275 TNS1Q9HBL0 1735 aaKnown RBP9.87□□□□□ -0.83
ZNF541-204ENST00000487275 EYA2O00167 538 aa9.87□□□□□ -0.83
ZNF541-204ENST00000487275 MSH5O43196 834 aa9.87□□□□□ -0.83
ZNF541-204ENST00000487275 CIAO1O76071 339 aa9.87□□□□□ -0.83
ZNF541-204ENST00000487275 IFIT2P09913 472 aaKnown RBP9.87□□□□□ -0.83
ZNF541-204ENST00000487275 MX1P20591 662 aa9.87□□□□□ -0.83
ZNF541-204ENST00000487275 ITGA6P23229 1130 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms