RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 RNMTO43148 476 aaKnown RBP16.13■□□□□ 0.17
TRIM56-204ENST00000487252 HIRAP54198 1017 aaPredicted RBP16.13■□□□□ 0.17
TRIM56-204ENST00000487252 CSRNP1Q96S65 589 aa16.13■□□□□ 0.17
TRIM56-204ENST00000487252 ZNF408Q9H9D4 720 aa16.13■□□□□ 0.17
TRIM56-204ENST00000487252 NBPF5PQ86XG9 351 aaPredicted RBP16.12■□□□□ 0.17
TRIM56-204ENST00000487252 GRIPAP1Q4V328 841 aa16.11■□□□□ 0.17
TRIM56-204ENST00000487252 CLEC4GQ6UXB4 293 aa16.11■□□□□ 0.17
TRIM56-204ENST00000487252 LARGE2Q8N3Y3 721 aa16.11■□□□□ 0.17
TRIM56-204ENST00000487252 CDHR2Q9BYE9 1310 aa16.11■□□□□ 0.17
TRIM56-204ENST00000487252 BRCA2P51587 3418 aa16.1■□□□□ 0.17
TRIM56-204ENST00000487252 COL6A3P12111 3177 aa16.1■□□□□ 0.17
TRIM56-204ENST00000487252 CRY2Q49AN0 593 aa16.1■□□□□ 0.17
TRIM56-204ENST00000487252 TEX13AQ9BXU3 409 aaPredicted RBP16.1■□□□□ 0.17
TRIM56-204ENST00000487252 SLC10A3P09131 477 aa16.09■□□□□ 0.17
TRIM56-204ENST00000487252 SULT6B1Q6IMI4 303 aa16.09■□□□□ 0.17
TRIM56-204ENST00000487252 ZNF496Q96IT1 587 aaPredicted RBP16.09■□□□□ 0.17
TRIM56-204ENST00000487252 NPC1L1Q9UHC9 1359 aa16.09■□□□□ 0.17
TRIM56-204ENST00000487252 HEG1Q9ULI3 1381 aa16.09■□□□□ 0.17
TRIM56-204ENST00000487252 CENPFP49454 3210 aa16.09■□□□□ 0.17
TRIM56-204ENST00000487252 TRIOBPQ9H2D6 2365 aa16.08■□□□□ 0.17
TRIM56-204ENST00000487252 RBBP6Q7Z6E9 1792 aaKnown RBP16.08■□□□□ 0.17
TRIM56-204ENST00000487252 CXCL9Q07325 125 aa16.08■□□□□ 0.16
TRIM56-204ENST00000487252 CDCA8Q53HL2 280 aa16.08■□□□□ 0.16
TRIM56-204ENST00000487252 FBXO46Q6PJ61 603 aaPredicted RBP16.08■□□□□ 0.16
TRIM56-204ENST00000487252 TPTE2Q6XPS3 522 aa16.08■□□□□ 0.16
TRIM56-204ENST00000487252 REM2Q8IYK8 340 aaPredicted RBP16.08■□□□□ 0.16
TRIM56-204ENST00000487252 ZNF330Q9Y3S2 320 aaPredicted RBP16.08■□□□□ 0.16
TRIM56-204ENST00000487252 A1BGP04217 495 aa16.07■□□□□ 0.16
TRIM56-204ENST00000487252 GMPSP49915 693 aaPredicted RBP16.07■□□□□ 0.16
TRIM56-204ENST00000487252 ZNF157P51786 506 aaPredicted RBP16.07■□□□□ 0.16
TRIM56-204ENST00000487252 NOM1Q5C9Z4 860 aaKnown RBP16.07■□□□□ 0.16
TRIM56-204ENST00000487252 DLK2Q6UY11 383 aa16.07■□□□□ 0.16
TRIM56-204ENST00000487252 DZIP3Q86Y13 1208 aaKnown RBP16.07■□□□□ 0.16
TRIM56-204ENST00000487252 NIM1KQ8IY84 436 aa16.07■□□□□ 0.16
TRIM56-204ENST00000487252 TRPM4Q8TD43 1214 aa16.07■□□□□ 0.16
TRIM56-204ENST00000487252 ZNF296Q8WUU4 475 aaPredicted RBP16.07■□□□□ 0.16
TRIM56-204ENST00000487252 GBA2Q9HCG7 927 aaPredicted RBP16.07■□□□□ 0.16
TRIM56-204ENST00000487252 COLQQ9Y215 455 aaPredicted RBP16.07■□□□□ 0.16
TRIM56-204ENST00000487252 RGL2O15211 777 aa16.06■□□□□ 0.16
TRIM56-204ENST00000487252 TNNT2P45379 298 aaPredicted RBP16.06■□□□□ 0.16
TRIM56-204ENST00000487252 USP48Q86UV5 1035 aa16.06■□□□□ 0.16
TRIM56-204ENST00000487252 VPS33BQ9H267 617 aa16.06■□□□□ 0.16
TRIM56-204ENST00000487252 RANBP2P49792 3224 aaKnown RBP16.05■□□□□ 0.16
TRIM56-204ENST00000487252 HOXA10P31260 410 aaPredicted RBP16.05■□□□□ 0.16
TRIM56-204ENST00000487252 SLC17A8Q8NDX2 589 aa16.05■□□□□ 0.16
TRIM56-204ENST00000487252 ZNRF3Q9ULT6 936 aa16.05■□□□□ 0.16
TRIM56-204ENST00000487252 POLR2AP24928 1970 aaKnown RBP16.04■□□□□ 0.16
TRIM56-204ENST00000487252 TTC5Q8N0Z6 440 aa16.04■□□□□ 0.16
TRIM56-204ENST00000487252 C2orf69Q8N8R5 385 aa16.04■□□□□ 0.16
TRIM56-204ENST00000487252 HDAC9Q9UKV0 1011 aa16.04■□□□□ 0.16
TRIM56-204ENST00000487252 RIC1Q4ADV7 1423 aa16.03■□□□□ 0.16
TRIM56-204ENST00000487252 SIPA1L3O60292 1781 aaPredicted RBP16.03■□□□□ 0.16
TRIM56-204ENST00000487252 KIF7Q2M1P5 1343 aa16.03■□□□□ 0.16
TRIM56-204ENST00000487252 ZNF790Q6PG37 636 aa16.03■□□□□ 0.16
TRIM56-204ENST00000487252 SLC51AQ86UW1 340 aa16.03■□□□□ 0.16
TRIM56-204ENST00000487252 CEP290O15078 2479 aa16.03■□□□□ 0.16
TRIM56-204ENST00000487252 POTEFA5A3E0 1075 aa16.02■□□□□ 0.16
TRIM56-204ENST00000487252 PPIP5K2O43314 1243 aa16.02■□□□□ 0.16
TRIM56-204ENST00000487252 IL13P35225 146 aa16.02■□□□□ 0.16
TRIM56-204ENST00000487252 NPM2Q86SE8 214 aaKnown RBP16.02■□□□□ 0.16
TRIM56-204ENST00000487252 ZNF652Q9Y2D9 606 aa16.02■□□□□ 0.16
TRIM56-204ENST00000487252 PAPPA2Q9BXP8 1791 aa16.02■□□□□ 0.15
TRIM56-204ENST00000487252 KIAA0100Q14667 2235 aaKnown RBP16.02■□□□□ 0.15
TRIM56-204ENST00000487252 AOC3Q16853 763 aa16.01■□□□□ 0.15
TRIM56-204ENST00000487252 NIP7Q9Y221 180 aaKnown RBP eCLIP16.01■□□□□ 0.15
TRIM56-204ENST00000487252 SHTN1A0MZ66 631 aa16■□□□□ 0.15
TRIM56-204ENST00000487252 INTS3Q68E01 1043 aaKnown RBP16■□□□□ 0.15
TRIM56-204ENST00000487252 KRT26Q7Z3Y9 468 aa16■□□□□ 0.15
TRIM56-204ENST00000487252 RASAL3Q86YV0 1011 aa16■□□□□ 0.15
TRIM56-204ENST00000487252 RTFDC1Q9BY42 306 aaPredicted RBP16■□□□□ 0.15
TRIM56-204ENST00000487252 CNOT7Q9UIV1 285 aaKnown RBP16■□□□□ 0.15
TRIM56-204ENST00000487252 ABCC12Q96J65 1359 aa16■□□□□ 0.15
TRIM56-204ENST00000487252 GPR25O00155 361 aa15.99■□□□□ 0.15
TRIM56-204ENST00000487252 OTUD5Q96G74 571 aa15.99■□□□□ 0.15
TRIM56-204ENST00000487252 TBC1D8O95759 1140 aa15.98■□□□□ 0.15
TRIM56-204ENST00000487252 MTHFSDQ2M296 383 aaKnown RBP15.98■□□□□ 0.15
TRIM56-204ENST00000487252 CRAMP1Q96RY5 1269 aa15.98■□□□□ 0.15
TRIM56-204ENST00000487252 TNIP1Q15025 636 aa15.97■□□□□ 0.15
TRIM56-204ENST00000487252 FMNL2Q96PY5 1086 aa15.97■□□□□ 0.15
TRIM56-204ENST00000487252 BCL2L13Q9BXK5 485 aa15.97■□□□□ 0.15
TRIM56-204ENST00000487252 CFHR5Q9BXR6 569 aa15.97■□□□□ 0.15
TRIM56-204ENST00000487252 ADM5C9JUS6 153 aa15.96■□□□□ 0.15
TRIM56-204ENST00000487252 H7C1D1 291 aa15.96■□□□□ 0.15
TRIM56-204ENST00000487252 PPEF1O14829 653 aaPredicted RBP15.96■□□□□ 0.15
TRIM56-204ENST00000487252 MICALL2Q8IY33 904 aa15.96■□□□□ 0.15
TRIM56-204ENST00000487252 DPF2Q92785 391 aa15.96■□□□□ 0.15
TRIM56-204ENST00000487252 FAM177BA6PVY3 158 aa15.95■□□□□ 0.14
TRIM56-204ENST00000487252 EGFRP00533 1210 aa15.95■□□□□ 0.14
TRIM56-204ENST00000487252 MNX1P50219 401 aaPredicted RBP15.95■□□□□ 0.14
TRIM56-204ENST00000487252 RPGRQ92834 1020 aaKnown RBP15.95■□□□□ 0.14
TRIM56-204ENST00000487252 USP16Q9Y5T5 823 aa15.95■□□□□ 0.14
TRIM56-204ENST00000487252 RAD17O75943 681 aa15.94■□□□□ 0.14
TRIM56-204ENST00000487252 TM4SF4P48230 202 aa15.94■□□□□ 0.14
TRIM56-204ENST00000487252 PIP4K2AP48426 406 aaPredicted RBP15.94■□□□□ 0.14
TRIM56-204ENST00000487252 KIAA2012Q0VF49 1180 aa15.94■□□□□ 0.14
TRIM56-204ENST00000487252 SAMD7Q7Z3H4 446 aa15.94■□□□□ 0.14
TRIM56-204ENST00000487252 ATP6V0A2Q9Y487 856 aa15.94■□□□□ 0.14
TRIM56-204ENST00000487252 YDJCA8MPS7 323 aa15.93■□□□□ 0.14
TRIM56-204ENST00000487252 GTF2E1P29083 439 aaPredicted RBP15.93■□□□□ 0.14
TRIM56-204ENST00000487252 HLFQ16534 295 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms