RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 ZNF296Q8WUU4 475 aaPredicted RBP16.84■□□□□ 0.29
ATPAF1-205ENST00000487193 MKI67P46013 3256 aaKnown RBP16.84■□□□□ 0.29
ATPAF1-205ENST00000487193 SZT2Q5T011 3432 aa16.83■□□□□ 0.29
ATPAF1-205ENST00000487193 KLRG2A4D1S0 409 aaPredicted RBP16.83■□□□□ 0.28
ATPAF1-205ENST00000487193 POTEFA5A3E0 1075 aa16.83■□□□□ 0.28
ATPAF1-205ENST00000487193 GMPSP49915 693 aaPredicted RBP16.83■□□□□ 0.28
ATPAF1-205ENST00000487193 FBXO46Q6PJ61 603 aaPredicted RBP16.83■□□□□ 0.28
ATPAF1-205ENST00000487193 GBA2Q9HCG7 927 aaPredicted RBP16.83■□□□□ 0.28
ATPAF1-205ENST00000487193 TBC1D8O95759 1140 aa16.82■□□□□ 0.28
ATPAF1-205ENST00000487193 ZC3H15Q8WU90 426 aaKnown RBP16.82■□□□□ 0.28
ATPAF1-205ENST00000487193 TCERG1O14776 1098 aaKnown RBP16.81■□□□□ 0.28
ATPAF1-205ENST00000487193 RNMTO43148 476 aaKnown RBP16.81■□□□□ 0.28
ATPAF1-205ENST00000487193 SLC24A1O60721 1099 aa16.81■□□□□ 0.28
ATPAF1-205ENST00000487193 TRPM4Q8TD43 1214 aa16.81■□□□□ 0.28
ATPAF1-205ENST00000487193 A1BGP04217 495 aa16.8■□□□□ 0.28
ATPAF1-205ENST00000487193 IL6STP40189 918 aaPredicted RBP16.8■□□□□ 0.28
ATPAF1-205ENST00000487193 CXCL9Q07325 125 aa16.8■□□□□ 0.28
ATPAF1-205ENST00000487193 TPTE2Q6XPS3 522 aa16.8■□□□□ 0.28
ATPAF1-205ENST00000487193 BCL2L13Q9BXK5 485 aa16.8■□□□□ 0.28
ATPAF1-205ENST00000487193 SNED1Q8TER0 1413 aa16.79■□□□□ 0.28
ATPAF1-205ENST00000487193 NPC1L1Q9UHC9 1359 aa16.79■□□□□ 0.28
ATPAF1-205ENST00000487193 PPIP5K2O43314 1243 aa16.79■□□□□ 0.28
ATPAF1-205ENST00000487193 SLC10A3P09131 477 aa16.79■□□□□ 0.28
ATPAF1-205ENST00000487193 SULT6B1Q6IMI4 303 aa16.79■□□□□ 0.28
ATPAF1-205ENST00000487193 SLC51AQ86UW1 340 aa16.79■□□□□ 0.28
ATPAF1-205ENST00000487193 DZIP3Q86Y13 1208 aaKnown RBP16.79■□□□□ 0.28
ATPAF1-205ENST00000487193 AOC3Q16853 763 aa16.78■□□□□ 0.28
ATPAF1-205ENST00000487193 CC2D2BQ6DHV5 1058 aa16.78■□□□□ 0.28
ATPAF1-205ENST00000487193 TTC5Q8N0Z6 440 aa16.78■□□□□ 0.28
ATPAF1-205ENST00000487193 SHTN1A0MZ66 631 aa16.77■□□□□ 0.28
ATPAF1-205ENST00000487193 GTF2E1P29083 439 aaPredicted RBP16.76■□□□□ 0.27
ATPAF1-205ENST00000487193 KRT26Q7Z3Y9 468 aa16.76■□□□□ 0.27
ATPAF1-205ENST00000487193 CNOT7Q9UIV1 285 aaKnown RBP16.76■□□□□ 0.27
ATPAF1-205ENST00000487193 POLR2AP24928 1970 aaKnown RBP16.76■□□□□ 0.27
ATPAF1-205ENST00000487193 EN2P19622 333 aaPredicted RBP16.75■□□□□ 0.27
ATPAF1-205ENST00000487193 PIP4K2AP48426 406 aaPredicted RBP16.75■□□□□ 0.27
ATPAF1-205ENST00000487193 REM2Q8IYK8 340 aaPredicted RBP16.75■□□□□ 0.27
ATPAF1-205ENST00000487193 ZNF496Q96IT1 587 aaPredicted RBP16.75■□□□□ 0.27
ATPAF1-205ENST00000487193 TEX13AQ9BXU3 409 aaPredicted RBP16.75■□□□□ 0.27
ATPAF1-205ENST00000487193 ZNRF3Q9ULT6 936 aa16.75■□□□□ 0.27
ATPAF1-205ENST00000487193 NIP7Q9Y221 180 aaKnown RBP eCLIP16.75■□□□□ 0.27
ATPAF1-205ENST00000487193 PAPPA2Q9BXP8 1791 aa16.74■□□□□ 0.27
ATPAF1-205ENST00000487193 ADM5C9JUS6 153 aa16.74■□□□□ 0.27
ATPAF1-205ENST00000487193 GPR25O00155 361 aa16.74■□□□□ 0.27
ATPAF1-205ENST00000487193 RAD17O75943 681 aa16.74■□□□□ 0.27
ATPAF1-205ENST00000487193 A0A0C4DFX4 3053 aa16.74■□□□□ 0.27
ATPAF1-205ENST00000487193 UBR2Q8IWV8 1755 aa16.74■□□□□ 0.27
ATPAF1-205ENST00000487193 H7C1D1 291 aa16.73■□□□□ 0.27
ATPAF1-205ENST00000487193 MRC1P22897 1456 aa16.73■□□□□ 0.27
ATPAF1-205ENST00000487193 GRIPAP1Q4V328 841 aa16.72■□□□□ 0.27
ATPAF1-205ENST00000487193 INTS3Q68E01 1043 aaKnown RBP16.72■□□□□ 0.27
ATPAF1-205ENST00000487193 CLEC4GQ6UXB4 293 aa16.72■□□□□ 0.27
ATPAF1-205ENST00000487193 SAMD7Q7Z3H4 446 aa16.72■□□□□ 0.27
ATPAF1-205ENST00000487193 RASAL3Q86YV0 1011 aa16.72■□□□□ 0.27
ATPAF1-205ENST00000487193 OTUD5Q96G74 571 aa16.72■□□□□ 0.27
ATPAF1-205ENST00000487193 ZNF652Q9Y2D9 606 aa16.72■□□□□ 0.27
ATPAF1-205ENST00000487193 MICALL2Q8IY33 904 aa16.71■□□□□ 0.27
ATPAF1-205ENST00000487193 RPGRQ92834 1020 aaKnown RBP16.71■□□□□ 0.27
ATPAF1-205ENST00000487193 HEG1Q9ULI3 1381 aa16.71■□□□□ 0.27
ATPAF1-205ENST00000487193 H0YGN5 161 aa16.7■□□□□ 0.26
ATPAF1-205ENST00000487193 FKTNO75072 461 aa16.7■□□□□ 0.26
ATPAF1-205ENST00000487193 TNIP1Q15025 636 aa16.7■□□□□ 0.26
ATPAF1-205ENST00000487193 RBM26Q5T8P6 1007 aaKnown RBP16.7■□□□□ 0.26
ATPAF1-205ENST00000487193 CHRDL2Q6WN34 429 aa16.7■□□□□ 0.26
ATPAF1-205ENST00000487193 DCPSQ96C86 337 aaKnown RBP16.7■□□□□ 0.26
ATPAF1-205ENST00000487193 PPEF1O14829 653 aaPredicted RBP16.69■□□□□ 0.26
ATPAF1-205ENST00000487193 MNX1P50219 401 aaPredicted RBP16.69■□□□□ 0.26
ATPAF1-205ENST00000487193 TBC1D10BQ4KMP7 808 aaPredicted RBP16.69■□□□□ 0.26
ATPAF1-205ENST00000487193 CDHR2Q9BYE9 1310 aa16.69■□□□□ 0.26
ATPAF1-205ENST00000487193 TRIOBPQ9H2D6 2365 aa16.69■□□□□ 0.26
ATPAF1-205ENST00000487193 COL6A3P12111 3177 aa16.68■□□□□ 0.26
ATPAF1-205ENST00000487193 CRY2Q49AN0 593 aa16.68■□□□□ 0.26
ATPAF1-205ENST00000487193 NUTM1Q86Y26 1132 aa16.68■□□□□ 0.26
ATPAF1-205ENST00000487193 ZBTB12Q9Y330 459 aaPredicted RBP16.68■□□□□ 0.26
ATPAF1-205ENST00000487193 PITPNM2Q9BZ72 1349 aa16.68■□□□□ 0.26
ATPAF1-205ENST00000487193 CDCA8Q53HL2 280 aa16.67■□□□□ 0.26
ATPAF1-205ENST00000487193 ZNF790Q6PG37 636 aa16.67■□□□□ 0.26
ATPAF1-205ENST00000487193 TMX4Q9H1E5 349 aaPredicted RBP16.67■□□□□ 0.26
ATPAF1-205ENST00000487193 R3HDMLQ9H3Y0 253 aa16.67■□□□□ 0.26
ATPAF1-205ENST00000487193 TRIM17Q9Y577 477 aa16.67■□□□□ 0.26
ATPAF1-205ENST00000487193 EGFRP00533 1210 aa16.66■□□□□ 0.26
ATPAF1-205ENST00000487193 RBM17Q96I25 401 aaKnown RBP16.66■□□□□ 0.26
ATPAF1-205ENST00000487193 VPS33BQ9H267 617 aa16.66■□□□□ 0.26
ATPAF1-205ENST00000487193 RBM27Q9P2N5 1060 aaKnown RBP16.66■□□□□ 0.26
ATPAF1-205ENST00000487193 PRAMEF22A3QJZ6 481 aa16.65■□□□□ 0.26
ATPAF1-205ENST00000487193 HOXA10P31260 410 aaPredicted RBP16.65■□□□□ 0.26
ATPAF1-205ENST00000487193 MTHFSDQ2M296 383 aaKnown RBP16.65■□□□□ 0.26
ATPAF1-205ENST00000487193 ABCC12Q96J65 1359 aa16.64■□□□□ 0.26
ATPAF1-205ENST00000487193 RBBP6Q7Z6E9 1792 aaKnown RBP16.64■□□□□ 0.25
ATPAF1-205ENST00000487193 MKRN3Q13064 507 aaKnown RBP16.64■□□□□ 0.25
ATPAF1-205ENST00000487193 HLFQ16534 295 aa16.64■□□□□ 0.25
ATPAF1-205ENST00000487193 NOM1Q5C9Z4 860 aaKnown RBP16.64■□□□□ 0.25
ATPAF1-205ENST00000487193 SUPT20HQ8NEM7 779 aa16.64■□□□□ 0.25
ATPAF1-205ENST00000487193 CDCA5Q96FF9 252 aa16.64■□□□□ 0.25
ATPAF1-205ENST00000487193 FMNL2Q96PY5 1086 aa16.64■□□□□ 0.25
ATPAF1-205ENST00000487193 USP16Q9Y5T5 823 aa16.64■□□□□ 0.25
ATPAF1-205ENST00000487193 SULF1Q8IWU6 871 aa16.63■□□□□ 0.25
ATPAF1-205ENST00000487193 CRAMP1Q96RY5 1269 aa16.63■□□□□ 0.25
ATPAF1-205ENST00000487193 CENPFP49454 3210 aa16.63■□□□□ 0.25
ATPAF1-205ENST00000487193 CUL9Q8IWT3 2517 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms