RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 CCDC191Q8NCU4 936 aa10.7□□□□□ -0.7
NUDCD3-209ENST00000487118 SUCLG2Q96I99 432 aa10.7□□□□□ -0.7
NUDCD3-209ENST00000487118 LNPKQ9C0E8 428 aa10.7□□□□□ -0.7
NUDCD3-209ENST00000487118 ZBTB3Q9H5J0 574 aa10.7□□□□□ -0.7
NUDCD3-209ENST00000487118 CNTNAP4Q9C0A0 1308 aa10.69□□□□□ -0.7
NUDCD3-209ENST00000487118 ERVV-1B6SEH8 477 aa10.69□□□□□ -0.7
NUDCD3-209ENST00000487118 ATP5J2-PTCD1G3V325 749 aa10.69□□□□□ -0.7
NUDCD3-209ENST00000487118 H7C1W4 665 aa10.69□□□□□ -0.7
NUDCD3-209ENST00000487118 GIGYF2Q6Y7W6 1299 aaKnown RBP10.69□□□□□ -0.7
NUDCD3-209ENST00000487118 KLHL34Q8N239 644 aa10.69□□□□□ -0.7
NUDCD3-209ENST00000487118 BCL11BQ9C0K0 894 aaPredicted RBP10.69□□□□□ -0.7
NUDCD3-209ENST00000487118 GPBP1L1Q9HC44 474 aaPredicted RBP10.69□□□□□ -0.7
NUDCD3-209ENST00000487118 CWC25Q9NXE8 425 aaPredicted RBP10.69□□□□□ -0.7
NUDCD3-209ENST00000487118 ANKRD36CQ5JPF3 1778 aa10.69□□□□□ -0.7
NUDCD3-209ENST00000487118 PTGER2P43116 358 aa10.68□□□□□ -0.7
NUDCD3-209ENST00000487118 RABL6Q3YEC7 729 aaPredicted RBP10.68□□□□□ -0.7
NUDCD3-209ENST00000487118 HSP90AB3PQ58FF7 597 aa10.68□□□□□ -0.7
NUDCD3-209ENST00000487118 RC3H1Q5TC82 1133 aaKnown RBP10.68□□□□□ -0.7
NUDCD3-209ENST00000487118 LINC00116Q8NCU8 138 aa10.68□□□□□ -0.7
NUDCD3-209ENST00000487118 BACH2Q9BYV9 841 aa10.68□□□□□ -0.7
NUDCD3-209ENST00000487118 NOP58Q9Y2X3 529 aaKnown RBP10.68□□□□□ -0.7
NUDCD3-209ENST00000487118 MYH14Q7Z406 1995 aaKnown RBP10.68□□□□□ -0.7
NUDCD3-209ENST00000487118 A0A087WZG4 1122 aa10.67□□□□□ -0.7
NUDCD3-209ENST00000487118 SRGAP3O43295 1099 aa10.67□□□□□ -0.7
NUDCD3-209ENST00000487118 RAB11FIP3O75154 756 aa10.67□□□□□ -0.7
NUDCD3-209ENST00000487118 FAM161AQ3B820 660 aa10.67□□□□□ -0.7
NUDCD3-209ENST00000487118 C8orf34Q49A92 452 aa10.67□□□□□ -0.7
NUDCD3-209ENST00000487118 DZIP3Q86Y13 1208 aaKnown RBP10.67□□□□□ -0.7
NUDCD3-209ENST00000487118 BICC1Q9H694 974 aaKnown RBP10.67□□□□□ -0.7
NUDCD3-209ENST00000487118 ZNF330Q9Y3S2 320 aaPredicted RBP10.67□□□□□ -0.7
NUDCD3-209ENST00000487118 BCORQ6W2J9 1755 aa10.67□□□□□ -0.7
NUDCD3-209ENST00000487118 RGL2O15211 777 aa10.66□□□□□ -0.7
NUDCD3-209ENST00000487118 APLP1P51693 650 aa10.66□□□□□ -0.7
NUDCD3-209ENST00000487118 HLFQ16534 295 aa10.66□□□□□ -0.7
NUDCD3-209ENST00000487118 EPHA10Q5JZY3 1008 aa10.66□□□□□ -0.7
NUDCD3-209ENST00000487118 UBE3BQ7Z3V4 1068 aa10.66□□□□□ -0.7
NUDCD3-209ENST00000487118 EXOC6BQ9Y2D4 811 aa10.66□□□□□ -0.7
NUDCD3-209ENST00000487118 RGPD3A6NKT7 1758 aaPredicted RBP10.66□□□□□ -0.7
NUDCD3-209ENST00000487118 RGPD4Q7Z3J3 1758 aa10.66□□□□□ -0.7
NUDCD3-209ENST00000487118 NUP98P52948 1817 aa10.65□□□□□ -0.7
NUDCD3-209ENST00000487118 TAF1LQ8IZX4 1826 aa10.65□□□□□ -0.7
NUDCD3-209ENST00000487118 SALL3Q9BXA9 1300 aa10.65□□□□□ -0.7
NUDCD3-209ENST00000487118 PLSCR1O15162 318 aa10.65□□□□□ -0.7
NUDCD3-209ENST00000487118 CAMTA2O94983 1202 aa10.65□□□□□ -0.7
NUDCD3-209ENST00000487118 PCCAP05165 728 aaPredicted RBP10.65□□□□□ -0.7
NUDCD3-209ENST00000487118 FOXO4P98177 505 aa10.65□□□□□ -0.7
NUDCD3-209ENST00000487118 HSP90AB4PQ58FF6 505 aa10.65□□□□□ -0.7
NUDCD3-209ENST00000487118 NPM2Q86SE8 214 aaKnown RBP10.65□□□□□ -0.7
NUDCD3-209ENST00000487118 NLRP10Q86W26 655 aa10.65□□□□□ -0.7
NUDCD3-209ENST00000487118 PLEKHM2Q8IWE5 1019 aa10.65□□□□□ -0.7
NUDCD3-209ENST00000487118 ZNF34Q8IZ26 560 aa10.65□□□□□ -0.7
NUDCD3-209ENST00000487118 DNAJC5GQ8N7S2 189 aa10.65□□□□□ -0.7
NUDCD3-209ENST00000487118 LRRCC1Q9C099 1032 aa10.65□□□□□ -0.7
NUDCD3-209ENST00000487118 ZBTB47Q9UFB7 747 aaPredicted RBP10.65□□□□□ -0.7
NUDCD3-209ENST00000487118 CCNL1Q9UK58 526 aaPredicted RBP10.65□□□□□ -0.7
NUDCD3-209ENST00000487118 RBM19Q9Y4C8 960 aaKnown RBP10.65□□□□□ -0.7
NUDCD3-209ENST00000487118 CDHR2Q9BYE9 1310 aa10.64□□□□□ -0.71
NUDCD3-209ENST00000487118 SCN7AQ01118 1682 aa10.64□□□□□ -0.71
NUDCD3-209ENST00000487118 SMARCA5O60264 1052 aaPredicted RBP10.64□□□□□ -0.71
NUDCD3-209ENST00000487118 SURF6O75683 361 aaKnown RBP10.64□□□□□ -0.71
NUDCD3-209ENST00000487118 RFX5P48382 616 aaPredicted RBP10.64□□□□□ -0.71
NUDCD3-209ENST00000487118 BMP2KLQ5H9B9 411 aa10.64□□□□□ -0.71
NUDCD3-209ENST00000487118 ZBTB38Q8NAP3 1195 aaPredicted RBP10.64□□□□□ -0.71
NUDCD3-209ENST00000487118 KIF1BPQ96EK5 621 aa10.64□□□□□ -0.71
NUDCD3-209ENST00000487118 PLA2G12BQ9BX93 195 aa10.64□□□□□ -0.71
NUDCD3-209ENST00000487118 TBC1D2BQ9UPU7 963 aa10.64□□□□□ -0.71
NUDCD3-209ENST00000487118 C4BP0C0L5 1744 aa10.64□□□□□ -0.71
NUDCD3-209ENST00000487118 RPS6KA4O75676 772 aa10.63□□□□□ -0.71
NUDCD3-209ENST00000487118 ERC1Q8IUD2 1116 aa10.63□□□□□ -0.71
NUDCD3-209ENST00000487118 C16orf71Q8IYS4 520 aaPredicted RBP10.63□□□□□ -0.71
NUDCD3-209ENST00000487118 RHPN1Q8TCX5 695 aa10.63□□□□□ -0.71
NUDCD3-209ENST00000487118 JARID2Q92833 1246 aaPredicted RBP10.63□□□□□ -0.71
NUDCD3-209ENST00000487118 OSBPL3Q9H4L5 887 aa10.63□□□□□ -0.71
NUDCD3-209ENST00000487118 COPRSQ9NQ92 184 aa10.63□□□□□ -0.71
NUDCD3-209ENST00000487118 UBN2Q6ZU65 1347 aa10.62□□□□□ -0.71
NUDCD3-209ENST00000487118 APBB1O00213 710 aa10.62□□□□□ -0.71
NUDCD3-209ENST00000487118 KCNQ4P56696 695 aa10.62□□□□□ -0.71
NUDCD3-209ENST00000487118 TXNRD1Q16881 649 aa10.62□□□□□ -0.71
NUDCD3-209ENST00000487118 OTUD7AQ8TE49 926 aaPredicted RBP10.62□□□□□ -0.71
NUDCD3-209ENST00000487118 ARXQ96QS3 562 aa10.62□□□□□ -0.71
NUDCD3-209ENST00000487118 STAP2Q9UGK3 403 aa10.62□□□□□ -0.71
NUDCD3-209ENST00000487118 AOX1Q06278 1338 aa10.61□□□□□ -0.71
NUDCD3-209ENST00000487118 GPTP24298 496 aa10.61□□□□□ -0.71
NUDCD3-209ENST00000487118 HTRA3P83110 453 aa10.61□□□□□ -0.71
NUDCD3-209ENST00000487118 PTPN12Q05209 780 aaKnown RBP10.61□□□□□ -0.71
NUDCD3-209ENST00000487118 SLC15A2Q16348 729 aa10.61□□□□□ -0.71
NUDCD3-209ENST00000487118 PARP10Q53GL7 1025 aa10.61□□□□□ -0.71
NUDCD3-209ENST00000487118 SLC27A3Q5K4L6 730 aa10.61□□□□□ -0.71
NUDCD3-209ENST00000487118 TTC22Q5TAA0 569 aa10.61□□□□□ -0.71
NUDCD3-209ENST00000487118 LMBR1LQ6UX01 489 aa10.61□□□□□ -0.71
NUDCD3-209ENST00000487118 CLEC4GQ6UXB4 293 aa10.61□□□□□ -0.71
NUDCD3-209ENST00000487118 SGIP1Q9BQI5 828 aa10.61□□□□□ -0.71
NUDCD3-209ENST00000487118 PA2G4Q9UQ80 394 aaKnown RBP10.61□□□□□ -0.71
NUDCD3-209ENST00000487118 ZNF652Q9Y2D9 606 aa10.61□□□□□ -0.71
NUDCD3-209ENST00000487118 USP42Q9H9J4 1324 aaKnown RBP10.6□□□□□ -0.71
NUDCD3-209ENST00000487118 GOLGB1Q14789 3259 aaKnown RBP10.6□□□□□ -0.71
NUDCD3-209ENST00000487118 SASH1O94885 1247 aa10.6□□□□□ -0.71
NUDCD3-209ENST00000487118 CSF1RP07333 972 aa10.6□□□□□ -0.71
NUDCD3-209ENST00000487118 GSPT1P15170 499 aaKnown RBP10.6□□□□□ -0.71
NUDCD3-209ENST00000487118 HMGB2P26583 209 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms