RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 PIM2Q9P1W9 311 aa13.15□□□□□ -0.3
NEK4-204ENST00000487068 SPEF2Q9C093 1822 aa13.14□□□□□ -0.31
NEK4-204ENST00000487068 TCERG1O14776 1098 aaKnown RBP13.14□□□□□ -0.31
NEK4-204ENST00000487068 HSP90AB3PQ58FF7 597 aa13.14□□□□□ -0.31
NEK4-204ENST00000487068 ZNF622Q969S3 477 aaKnown RBP eCLIP13.14□□□□□ -0.31
NEK4-204ENST00000487068 TAF1P21675 1872 aa13.14□□□□□ -0.31
NEK4-204ENST00000487068 FER1L6Q2WGJ9 1857 aa13.14□□□□□ -0.31
NEK4-204ENST00000487068 DICER1Q9UPY3 1922 aaKnown RBP13.13□□□□□ -0.31
NEK4-204ENST00000487068 DALRD3Q5D0E6 543 aaKnown RBP13.13□□□□□ -0.31
NEK4-204ENST00000487068 ARHGAP27Q6ZUM4 889 aa13.13□□□□□ -0.31
NEK4-204ENST00000487068 LRP10Q7Z4F1 713 aa13.13□□□□□ -0.31
NEK4-204ENST00000487068 PPP1R42Q7Z4L9 355 aa13.13□□□□□ -0.31
NEK4-204ENST00000487068 NUTM1Q86Y26 1132 aa13.13□□□□□ -0.31
NEK4-204ENST00000487068 BRIP1Q9BX63 1249 aa13.13□□□□□ -0.31
NEK4-204ENST00000487068 UBN2Q6ZU65 1347 aa13.13□□□□□ -0.31
NEK4-204ENST00000487068 ABCC12Q96J65 1359 aa13.12□□□□□ -0.31
NEK4-204ENST00000487068 IBTKQ9P2D0 1353 aaPredicted RBP13.12□□□□□ -0.31
NEK4-204ENST00000487068 EXOSC9Q06265 439 aaKnown RBP13.12□□□□□ -0.31
NEK4-204ENST00000487068 PARP10Q53GL7 1025 aa13.12□□□□□ -0.31
NEK4-204ENST00000487068 RIC3Q7Z5B4 369 aa13.12□□□□□ -0.31
NEK4-204ENST00000487068 DNAJC5GQ8N7S2 189 aa13.12□□□□□ -0.31
NEK4-204ENST00000487068 PHAXQ9H814 394 aaKnown RBP13.12□□□□□ -0.31
NEK4-204ENST00000487068 NMRK2Q9NPI5 230 aa13.12□□□□□ -0.31
NEK4-204ENST00000487068 DDX58O95786 925 aaKnown RBP13.11□□□□□ -0.31
NEK4-204ENST00000487068 ANKRD13DQ6ZTN6 518 aa13.11□□□□□ -0.31
NEK4-204ENST00000487068 C16orf71Q8IYS4 520 aaPredicted RBP13.11□□□□□ -0.31
NEK4-204ENST00000487068 PLBD2Q8NHP8 589 aa13.11□□□□□ -0.31
NEK4-204ENST00000487068 ZNF428Q96B54 188 aa13.11□□□□□ -0.31
NEK4-204ENST00000487068 ZNF219Q9P2Y4 722 aaPredicted RBP13.11□□□□□ -0.31
NEK4-204ENST00000487068 PDZRN3Q9UPQ7 1066 aa13.11□□□□□ -0.31
NEK4-204ENST00000487068 KCNA3P22001 575 aa13.1□□□□□ -0.31
NEK4-204ENST00000487068 ERFEQ4G0M1 354 aa13.1□□□□□ -0.31
NEK4-204ENST00000487068 SUSD4Q5VX71 490 aa13.1□□□□□ -0.31
NEK4-204ENST00000487068 ZNF34Q8IZ26 560 aa13.1□□□□□ -0.31
NEK4-204ENST00000487068 TTLL6Q8N841 843 aa13.1□□□□□ -0.31
NEK4-204ENST00000487068 RBM46Q8TBY0 533 aaKnown RBP13.1□□□□□ -0.31
NEK4-204ENST00000487068 SPINK5Q9NQ38 1064 aaPredicted RBP13.1□□□□□ -0.31
NEK4-204ENST00000487068 E9PSI1 815 aa13.09□□□□□ -0.31
NEK4-204ENST00000487068 NTSR2O95665 410 aa13.09□□□□□ -0.31
NEK4-204ENST00000487068 TCIRG1Q13488 830 aa13.09□□□□□ -0.31
NEK4-204ENST00000487068 RPGRQ92834 1020 aaKnown RBP13.09□□□□□ -0.31
NEK4-204ENST00000487068 MASTLQ96GX5 879 aa13.09□□□□□ -0.31
NEK4-204ENST00000487068 UTP14AQ9BVJ6 771 aaKnown RBP13.09□□□□□ -0.31
NEK4-204ENST00000487068 ZNF521Q96K83 1311 aa13.09□□□□□ -0.31
NEK4-204ENST00000487068 RIC1Q4ADV7 1423 aa13.08□□□□□ -0.32
NEK4-204ENST00000487068 ATP5J2-PTCD1G3V325 749 aa13.08□□□□□ -0.32
NEK4-204ENST00000487068 C9orf131Q5VYM1 1079 aa13.08□□□□□ -0.32
NEK4-204ENST00000487068 MYD88Q99836 296 aa13.08□□□□□ -0.32
NEK4-204ENST00000487068 TRMT112Q9UI30 125 aaKnown RBP13.08□□□□□ -0.32
NEK4-204ENST00000487068 SRGNP10124 158 aa13.07□□□□□ -0.32
NEK4-204ENST00000487068 HNRNPUQ00839 825 aaKnown RBP eCLIP13.07□□□□□ -0.32
NEK4-204ENST00000487068 FSTL1Q12841 308 aa13.07□□□□□ -0.32
NEK4-204ENST00000487068 FKBP5Q13451 457 aaPredicted RBP13.07□□□□□ -0.32
NEK4-204ENST00000487068 RTL5Q5HYW3 569 aaPredicted RBP13.07□□□□□ -0.32
NEK4-204ENST00000487068 STYK1Q6J9G0 422 aa13.07□□□□□ -0.32
NEK4-204ENST00000487068 NLRP10Q86W26 655 aa13.07□□□□□ -0.32
NEK4-204ENST00000487068 CNKSR1Q969H4 720 aa13.07□□□□□ -0.32
NEK4-204ENST00000487068 KLRG1Q96E93 195 aa13.07□□□□□ -0.32
NEK4-204ENST00000487068 RNF123Q5XPI4 1314 aa13.07□□□□□ -0.32
NEK4-204ENST00000487068 KDM2BQ8NHM5 1336 aa13.07□□□□□ -0.32
NEK4-204ENST00000487068 SH3TC1Q8TE82 1336 aa13.07□□□□□ -0.32
NEK4-204ENST00000487068 NPR1P16066 1061 aa13.06□□□□□ -0.32
NEK4-204ENST00000487068 NEXNQ0ZGT2 675 aa13.06□□□□□ -0.32
NEK4-204ENST00000487068 FLIIQ13045 1269 aa13.06□□□□□ -0.32
NEK4-204ENST00000487068 PRPF40BQ6NWY9 871 aaKnown RBP13.06□□□□□ -0.32
NEK4-204ENST00000487068 MAP3K2Q9Y2U5 619 aa13.06□□□□□ -0.32
NEK4-204ENST00000487068 PI4KAP2A4QPH2 592 aa13.05□□□□□ -0.32
NEK4-204ENST00000487068 C21orf2O43822 256 aa13.05□□□□□ -0.32
NEK4-204ENST00000487068 VAMP4O75379 141 aa13.05□□□□□ -0.32
NEK4-204ENST00000487068 HTRA3P83110 453 aa13.05□□□□□ -0.32
NEK4-204ENST00000487068 PI4KAP1Q8N8J0 262 aa13.05□□□□□ -0.32
NEK4-204ENST00000487068 JMYQ8N9B5 988 aa13.05□□□□□ -0.32
NEK4-204ENST00000487068 NLRP3Q96P20 1036 aa13.05□□□□□ -0.32
NEK4-204ENST00000487068 RNF181Q9P0P0 153 aa13.05□□□□□ -0.32
NEK4-204ENST00000487068 RASSF7Q02833 373 aa13.04□□□□□ -0.32
NEK4-204ENST00000487068 KSR2Q6VAB6 950 aa13.04□□□□□ -0.32
NEK4-204ENST00000487068 G2E3Q7L622 706 aa13.04□□□□□ -0.32
NEK4-204ENST00000487068 CDCA7LQ96GN5 454 aa13.04□□□□□ -0.32
NEK4-204ENST00000487068 HCLS1P14317 486 aaPredicted RBP13.03□□□□□ -0.32
NEK4-204ENST00000487068 ALDH1B1P30837 517 aa13.03□□□□□ -0.32
NEK4-204ENST00000487068 SLFN5Q08AF3 891 aa13.03□□□□□ -0.32
NEK4-204ENST00000487068 COL13A1Q5TAT6 717 aaPredicted RBP13.03□□□□□ -0.32
NEK4-204ENST00000487068 SOGA3Q5TF21 947 aa13.03□□□□□ -0.32
NEK4-204ENST00000487068 FAM89AQ96GI7 184 aa13.03□□□□□ -0.32
NEK4-204ENST00000487068 RBM17Q96I25 401 aaKnown RBP13.03□□□□□ -0.32
NEK4-204ENST00000487068 ISCA1Q9BUE6 129 aa13.03□□□□□ -0.32
NEK4-204ENST00000487068 METTL22Q9BUU2 404 aaPredicted RBP13.03□□□□□ -0.32
NEK4-204ENST00000487068 CWC25Q9NXE8 425 aaPredicted RBP13.03□□□□□ -0.32
NEK4-204ENST00000487068 LRRC37AA6NMS7 1700 aa13.02□□□□□ -0.32
NEK4-204ENST00000487068 SAMD1Q6SPF0 538 aaPredicted RBP13.02□□□□□ -0.33
NEK4-204ENST00000487068 TMX4Q9H1E5 349 aaPredicted RBP13.02□□□□□ -0.33
NEK4-204ENST00000487068 RRAGCQ9HB90 399 aa13.02□□□□□ -0.33
NEK4-204ENST00000487068 CRY2Q49AN0 593 aa13.01□□□□□ -0.33
NEK4-204ENST00000487068 CCDC93Q567U6 631 aa13.01□□□□□ -0.33
NEK4-204ENST00000487068 C3orf67Q6ZVT6 689 aa13.01□□□□□ -0.33
NEK4-204ENST00000487068 SYNE4Q8N205 404 aa13.01□□□□□ -0.33
NEK4-204ENST00000487068 CCDC191Q8NCU4 936 aa13.01□□□□□ -0.33
NEK4-204ENST00000487068 SMC1BQ8NDV3 1235 aa13.01□□□□□ -0.33
NEK4-204ENST00000487068 DNAAF4Q8WXU2 420 aa13.01□□□□□ -0.33
NEK4-204ENST00000487068 BCL2L13Q9BXK5 485 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms