RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 LARGE2Q8N3Y3 721 aa10.29□□□□□ -0.76
PDPN-205ENST00000487038 RPGRQ92834 1020 aaKnown RBP10.29□□□□□ -0.76
PDPN-205ENST00000487038 TMX4Q9H1E5 349 aaPredicted RBP10.29□□□□□ -0.76
PDPN-205ENST00000487038 ADARB2Q9NS39 739 aaKnown RBP10.29□□□□□ -0.76
PDPN-205ENST00000487038 COL3A1P02461 1466 aaPredicted RBP10.29□□□□□ -0.76
PDPN-205ENST00000487038 ANKRD36CQ5JPF3 1778 aa10.29□□□□□ -0.76
PDPN-205ENST00000487038 FAM177BA6PVY3 158 aa10.28□□□□□ -0.76
PDPN-205ENST00000487038 AOC2O75106 756 aa10.28□□□□□ -0.76
PDPN-205ENST00000487038 CST9Q5W186 159 aa10.28□□□□□ -0.76
PDPN-205ENST00000487038 SAPCD2Q86UD0 394 aa10.28□□□□□ -0.76
PDPN-205ENST00000487038 NIM1KQ8IY84 436 aa10.28□□□□□ -0.76
PDPN-205ENST00000487038 IL17REQ8NFR9 667 aa10.28□□□□□ -0.76
PDPN-205ENST00000487038 LAMB2P55268 1798 aa10.28□□□□□ -0.76
PDPN-205ENST00000487038 KDM3BQ7LBC6 1761 aa10.28□□□□□ -0.76
PDPN-205ENST00000487038 TRAF5O00463 557 aa10.27□□□□□ -0.77
PDPN-205ENST00000487038 U2SURPO15042 1029 aaKnown RBP10.27□□□□□ -0.77
PDPN-205ENST00000487038 CELF2O95319 508 aaKnown RBP10.27□□□□□ -0.77
PDPN-205ENST00000487038 SNRPA1P09661 255 aaKnown RBP10.27□□□□□ -0.77
PDPN-205ENST00000487038 HSPA5P11021 654 aaKnown RBP10.27□□□□□ -0.77
PDPN-205ENST00000487038 EPS15P42566 896 aa10.27□□□□□ -0.77
PDPN-205ENST00000487038 PIP4K2AP48426 406 aaPredicted RBP10.27□□□□□ -0.77
PDPN-205ENST00000487038 CRY2Q49AN0 593 aa10.27□□□□□ -0.77
PDPN-205ENST00000487038 CDHR2Q9BYE9 1310 aa10.27□□□□□ -0.77
PDPN-205ENST00000487038 IBTKQ9P2D0 1353 aaPredicted RBP10.26□□□□□ -0.77
PDPN-205ENST00000487038 FMR1Q06787 632 aaKnown RBP eCLIP10.26□□□□□ -0.77
PDPN-205ENST00000487038 NOGQ13253 232 aa10.26□□□□□ -0.77
PDPN-205ENST00000487038 AMER1Q5JTC6 1135 aaPredicted RBP10.26□□□□□ -0.77
PDPN-205ENST00000487038 VPS33BQ9H267 617 aa10.26□□□□□ -0.77
PDPN-205ENST00000487038 GPRC5DQ9NZD1 345 aa10.26□□□□□ -0.77
PDPN-205ENST00000487038 USP16Q9Y5T5 823 aa10.26□□□□□ -0.77
PDPN-205ENST00000487038 DLG5Q8TDM6 1919 aa10.26□□□□□ -0.77
PDPN-205ENST00000487038 KIF7Q2M1P5 1343 aa10.26□□□□□ -0.77
PDPN-205ENST00000487038 ABCC12Q96J65 1359 aa10.26□□□□□ -0.77
PDPN-205ENST00000487038 PPEF1O14829 653 aaPredicted RBP10.25□□□□□ -0.77
PDPN-205ENST00000487038 PPIP5K2O43314 1243 aa10.25□□□□□ -0.77
PDPN-205ENST00000487038 CIAPIN1Q6FI81 312 aa10.25□□□□□ -0.77
PDPN-205ENST00000487038 SUPT20HQ8NEM7 779 aa10.25□□□□□ -0.77
PDPN-205ENST00000487038 RTF1Q92541 710 aaKnown RBP10.25□□□□□ -0.77
PDPN-205ENST00000487038 RBM17Q96I25 401 aaKnown RBP10.25□□□□□ -0.77
PDPN-205ENST00000487038 ZNF408Q9H9D4 720 aa10.25□□□□□ -0.77
PDPN-205ENST00000487038 ZC3H15Q8WU90 426 aaKnown RBP10.24□□□□□ -0.77
PDPN-205ENST00000487038 CLSPNQ9HAW4 1339 aa10.24□□□□□ -0.77
PDPN-205ENST00000487038 KCNQ3O43525 872 aa10.23□□□□□ -0.77
PDPN-205ENST00000487038 HOXA10P31260 410 aaPredicted RBP10.23□□□□□ -0.77
PDPN-205ENST00000487038 PRPF38BQ5VTL8 546 aaKnown RBP10.23□□□□□ -0.77
PDPN-205ENST00000487038 KIF6Q6ZMV9 814 aa10.23□□□□□ -0.77
PDPN-205ENST00000487038 CDC37L1Q7L3B6 337 aa10.23□□□□□ -0.77
PDPN-205ENST00000487038 NUTM1Q86Y26 1132 aa10.23□□□□□ -0.77
PDPN-205ENST00000487038 BCL2L13Q9BXK5 485 aa10.23□□□□□ -0.77
PDPN-205ENST00000487038 GLIS2Q9BZE0 524 aaPredicted RBP10.23□□□□□ -0.77
PDPN-205ENST00000487038 SAGE1Q9NXZ1 904 aa10.23□□□□□ -0.77
PDPN-205ENST00000487038 LRRC37AA6NMS7 1700 aa10.23□□□□□ -0.77
PDPN-205ENST00000487038 NPC1L1Q9UHC9 1359 aa10.23□□□□□ -0.77
PDPN-205ENST00000487038 POLR2AP24928 1970 aaKnown RBP10.23□□□□□ -0.77
PDPN-205ENST00000487038 PRAMEF22A3QJZ6 481 aa10.22□□□□□ -0.77
PDPN-205ENST00000487038 ERVV-1B6SEH8 477 aa10.22□□□□□ -0.77
PDPN-205ENST00000487038 HLFQ16534 295 aa10.22□□□□□ -0.77
PDPN-205ENST00000487038 AOC3Q16853 763 aa10.22□□□□□ -0.77
PDPN-205ENST00000487038 CC2D1BQ5T0F9 858 aaKnown RBP10.22□□□□□ -0.77
PDPN-205ENST00000487038 CRAMP1Q96RY5 1269 aa10.22□□□□□ -0.77
PDPN-205ENST00000487038 ZNRF3Q9ULT6 936 aa10.22□□□□□ -0.77
PDPN-205ENST00000487038 NBPF26B4DH59 902 aa10.21□□□□□ -0.77
PDPN-205ENST00000487038 PRKAR2BP31323 418 aa10.21□□□□□ -0.77
PDPN-205ENST00000487038 SOX10P56693 466 aa10.21□□□□□ -0.77
PDPN-205ENST00000487038 HUNKP57058 714 aa10.21□□□□□ -0.77
PDPN-205ENST00000487038 TNIP1Q15025 636 aa10.21□□□□□ -0.77
PDPN-205ENST00000487038 NBPF10Q6P3W6 841 aaKnown RBP10.21□□□□□ -0.77
PDPN-205ENST00000487038 NBPF15Q8N660 670 aa10.21□□□□□ -0.77
PDPN-205ENST00000487038 PGAP2Q9UHJ9 254 aa10.21□□□□□ -0.77
PDPN-205ENST00000487038 MAP3K15Q6ZN16 1313 aa10.21□□□□□ -0.78
PDPN-205ENST00000487038 TCERG1O14776 1098 aaKnown RBP10.2□□□□□ -0.78
PDPN-205ENST00000487038 GMPSP49915 693 aaPredicted RBP10.2□□□□□ -0.78
PDPN-205ENST00000487038 CXCL9Q07325 125 aa10.2□□□□□ -0.78
PDPN-205ENST00000487038 PPP1R42Q7Z4L9 355 aa10.2□□□□□ -0.78
PDPN-205ENST00000487038 CFAP53Q96M91 514 aa10.2□□□□□ -0.78
PDPN-205ENST00000487038 NLRP3Q96P20 1036 aa10.2□□□□□ -0.78
PDPN-205ENST00000487038 H7C1D1 291 aa10.19□□□□□ -0.78
PDPN-205ENST00000487038 RGMBQ6NW40 437 aa10.19□□□□□ -0.78
PDPN-205ENST00000487038 DPP8Q6V1X1 898 aaPredicted RBP10.19□□□□□ -0.78
PDPN-205ENST00000487038 CCDC102AQ96A19 550 aa10.19□□□□□ -0.78
PDPN-205ENST00000487038 GCC1Q96CN9 775 aa10.19□□□□□ -0.78
PDPN-205ENST00000487038 NUDCQ9Y266 331 aa10.19□□□□□ -0.78
PDPN-205ENST00000487038 ATP6V0A2Q9Y487 856 aa10.19□□□□□ -0.78
PDPN-205ENST00000487038 TAF1P21675 1872 aa10.19□□□□□ -0.78
PDPN-205ENST00000487038 PSME4Q14997 1843 aa10.19□□□□□ -0.78
PDPN-205ENST00000487038 UBN2Q6ZU65 1347 aa10.18□□□□□ -0.78
PDPN-205ENST00000487038 HTATSF1O43719 755 aaKnown RBP10.18□□□□□ -0.78
PDPN-205ENST00000487038 GPTP24298 496 aa10.18□□□□□ -0.78
PDPN-205ENST00000487038 PARP10Q53GL7 1025 aa10.18□□□□□ -0.78
PDPN-205ENST00000487038 MCM10Q7L590 875 aa10.18□□□□□ -0.78
PDPN-205ENST00000487038 REM2Q8IYK8 340 aaPredicted RBP10.18□□□□□ -0.78
PDPN-205ENST00000487038 NGEFQ8N5V2 710 aa10.18□□□□□ -0.78
PDPN-205ENST00000487038 C2orf69Q8N8R5 385 aa10.18□□□□□ -0.78
PDPN-205ENST00000487038 RTFDC1Q9BY42 306 aaPredicted RBP10.18□□□□□ -0.78
PDPN-205ENST00000487038 RSPH6AQ9H0K4 717 aa10.18□□□□□ -0.78
PDPN-205ENST00000487038 DUOX1Q9NRD9 1551 aa10.18□□□□□ -0.78
PDPN-205ENST00000487038 PAPPA2Q9BXP8 1791 aa10.17□□□□□ -0.78
PDPN-205ENST00000487038 ABCC4O15439 1325 aa10.17□□□□□ -0.78
PDPN-205ENST00000487038 NTSR2O95665 410 aa10.17□□□□□ -0.78
PDPN-205ENST00000487038 ZNF157P51786 506 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms