RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 HIRAP54198 1017 aaPredicted RBP7.55□□□□□ -1.2
SNRNP27-204ENST00000487029 DMRTC2Q8IXT2 367 aaPredicted RBP7.55□□□□□ -1.2
SNRNP27-204ENST00000487029 FMR1NBQ8N0W7 255 aaPredicted RBP7.55□□□□□ -1.2
SNRNP27-204ENST00000487029 USP17L5A8MUK1 530 aa7.54□□□□□ -1.2
SNRNP27-204ENST00000487029 LZTS3O60299 673 aaPredicted RBP7.54□□□□□ -1.2
SNRNP27-204ENST00000487029 NFATC2IPQ8NCF5 419 aa7.54□□□□□ -1.2
SNRNP27-204ENST00000487029 TPCN2Q8NHX9 752 aa7.54□□□□□ -1.2
SNRNP27-204ENST00000487029 USP21Q9UK80 565 aa7.54□□□□□ -1.2
SNRNP27-204ENST00000487029 PSMA6P60900 246 aaKnown RBP7.53□□□□□ -1.2
SNRNP27-204ENST00000487029 RAC1P63000 192 aa7.53□□□□□ -1.2
SNRNP27-204ENST00000487029 CLDN10P78369 228 aa7.53□□□□□ -1.2
SNRNP27-204ENST00000487029 PSAPL1Q6NUJ1 521 aa7.53□□□□□ -1.2
SNRNP27-204ENST00000487029 DNAJB12Q9NXW2 375 aaKnown RBP7.53□□□□□ -1.2
SNRNP27-204ENST00000487029 ANKIB1Q9P2G1 1089 aa7.53□□□□□ -1.2
SNRNP27-204ENST00000487029 C21orf2O43822 256 aa7.52□□□□□ -1.21
SNRNP27-204ENST00000487029 BTLAQ7Z6A9 289 aa7.52□□□□□ -1.21
SNRNP27-204ENST00000487029 COG6Q9Y2V7 657 aa7.52□□□□□ -1.21
SNRNP27-204ENST00000487029 KRTAP4-8A0A0G2JLE6 195 aa7.51□□□□□ -1.21
SNRNP27-204ENST00000487029 PLAURQ03405 335 aa7.51□□□□□ -1.21
SNRNP27-204ENST00000487029 MCM6Q14566 821 aa7.51□□□□□ -1.21
SNRNP27-204ENST00000487029 CCDC102BQ68D86 513 aa7.51□□□□□ -1.21
SNRNP27-204ENST00000487029 GSX2Q9BZM3 304 aa7.51□□□□□ -1.21
SNRNP27-204ENST00000487029 GRIK5Q16478 980 aa7.5□□□□□ -1.21
SNRNP27-204ENST00000487029 ALDH16A1Q8IZ83 802 aa7.5□□□□□ -1.21
SNRNP27-204ENST00000487029 TSEN2Q8NCE0 465 aaKnown RBP7.5□□□□□ -1.21
SNRNP27-204ENST00000487029 WFDC12Q8WWY7 111 aa7.5□□□□□ -1.21
SNRNP27-204ENST00000487029 GOLGA2P5Q9HBQ8 144 aa7.5□□□□□ -1.21
SNRNP27-204ENST00000487029 GRNP28799 593 aaKnown RBP7.49□□□□□ -1.21
SNRNP27-204ENST00000487029 NOS3P29474 1203 aa7.49□□□□□ -1.21
SNRNP27-204ENST00000487029 IREB2P48200 963 aaKnown RBP7.49□□□□□ -1.21
SNRNP27-204ENST00000487029 TMEM132AQ24JP5 1023 aa7.49□□□□□ -1.21
SNRNP27-204ENST00000487029 PPP1R12BO60237 982 aaPredicted RBP7.48□□□□□ -1.21
SNRNP27-204ENST00000487029 RGS9O75916 674 aaPredicted RBP7.48□□□□□ -1.21
SNRNP27-204ENST00000487029 DKK1O94907 266 aa7.48□□□□□ -1.21
SNRNP27-204ENST00000487029 MSL1Q68DK7 614 aa7.48□□□□□ -1.21
SNRNP27-204ENST00000487029 TRIM50Q86XT4 487 aa7.48□□□□□ -1.21
SNRNP27-204ENST00000487029 ADAMTS19Q8TE59 1207 aa7.48□□□□□ -1.21
SNRNP27-204ENST00000487029 RNF112Q9ULX5 631 aa7.48□□□□□ -1.21
SNRNP27-204ENST00000487029 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.48□□□□□ -1.21
SNRNP27-204ENST00000487029 BTBD11A6QL63 1104 aa7.47□□□□□ -1.21
SNRNP27-204ENST00000487029 NFKB1P19838 968 aa7.47□□□□□ -1.21
SNRNP27-204ENST00000487029 FBXO11Q86XK2 927 aa7.47□□□□□ -1.21
SNRNP27-204ENST00000487029 POM121Q96HA1 1249 aa7.47□□□□□ -1.21
SNRNP27-204ENST00000487029 MEGF10Q96KG7 1140 aa7.47□□□□□ -1.21
SNRNP27-204ENST00000487029 BCS1LQ9Y276 419 aa7.47□□□□□ -1.21
SNRNP27-204ENST00000487029 USP17L3A6NCW0 530 aa7.46□□□□□ -1.22
SNRNP27-204ENST00000487029 USP17L4A6NCW7 530 aa7.46□□□□□ -1.22
SNRNP27-204ENST00000487029 ZBTB42B2RXF5 422 aa7.46□□□□□ -1.22
SNRNP27-204ENST00000487029 USP17L2Q6R6M4 530 aa7.46□□□□□ -1.22
SNRNP27-204ENST00000487029 USP17L1Q7RTZ2 530 aa7.46□□□□□ -1.22
SNRNP27-204ENST00000487029 NGLY1Q96IV0 654 aa7.46□□□□□ -1.22
SNRNP27-204ENST00000487029 DMGDHQ9UI17 866 aaKnown RBP7.46□□□□□ -1.22
SNRNP27-204ENST00000487029 CHMP3Q9Y3E7 222 aa7.46□□□□□ -1.22
SNRNP27-204ENST00000487029 POM121CA8CG34 1229 aa7.45□□□□□ -1.22
SNRNP27-204ENST00000487029 M0R2N6 131 aa7.45□□□□□ -1.22
SNRNP27-204ENST00000487029 CPB1P15086 417 aa7.45□□□□□ -1.22
SNRNP27-204ENST00000487029 CCINQ13939 588 aa7.45□□□□□ -1.22
SNRNP27-204ENST00000487029 MCTP1Q6DN14 999 aa7.45□□□□□ -1.22
SNRNP27-204ENST00000487029 FAM35AQ86V20 835 aa7.45□□□□□ -1.22
SNRNP27-204ENST00000487029 PLEKHM2Q8IWE5 1019 aa7.45□□□□□ -1.22
SNRNP27-204ENST00000487029 OGFOD1Q8N543 542 aa7.45□□□□□ -1.22
SNRNP27-204ENST00000487029 UCN2Q96RP3 112 aa7.45□□□□□ -1.22
SNRNP27-204ENST00000487029 LPIN3Q9BQK8 851 aa7.45□□□□□ -1.22
SNRNP27-204ENST00000487029 C2orf49Q9BVC5 232 aaPredicted RBP7.45□□□□□ -1.22
SNRNP27-204ENST00000487029 ZFATQ9P243 1243 aa7.45□□□□□ -1.22
SNRNP27-204ENST00000487029 ATAD2Q6PL18 1390 aa7.45□□□□□ -1.22
SNRNP27-204ENST00000487029 DEAF1O75398 565 aaPredicted RBP7.44□□□□□ -1.22
SNRNP27-204ENST00000487029 ATP1A2P50993 1020 aa7.44□□□□□ -1.22
SNRNP27-204ENST00000487029 PERM1Q5SV97 790 aa7.44□□□□□ -1.22
SNRNP27-204ENST00000487029 GAS2L2Q8NHY3 880 aa7.44□□□□□ -1.22
SNRNP27-204ENST00000487029 PNMA5Q96PV4 448 aa7.44□□□□□ -1.22
SNRNP27-204ENST00000487029 PRR23CQ6ZRP0 262 aa7.43□□□□□ -1.22
SNRNP27-204ENST00000487029 LARGE2Q8N3Y3 721 aa7.43□□□□□ -1.22
SNRNP27-204ENST00000487029 SCG3Q8WXD2 468 aaKnown RBP7.43□□□□□ -1.22
SNRNP27-204ENST00000487029 ZNF594Q96JF6 807 aaPredicted RBP7.43□□□□□ -1.22
SNRNP27-204ENST00000487029 EFCC1Q9HA90 598 aa7.43□□□□□ -1.22
SNRNP27-204ENST00000487029 PALM3A6NDB9 673 aaPredicted RBP7.42□□□□□ -1.22
SNRNP27-204ENST00000487029 MLLT1Q03111 559 aaPredicted RBP7.42□□□□□ -1.22
SNRNP27-204ENST00000487029 SIX5Q8N196 739 aa7.42□□□□□ -1.22
SNRNP27-204ENST00000487029 STAG2Q8N3U4 1231 aa7.42□□□□□ -1.22
SNRNP27-204ENST00000487029 DTWD1Q8N5C7 304 aa7.42□□□□□ -1.22
SNRNP27-204ENST00000487029 CHMP7Q8WUX9 453 aaPredicted RBP7.42□□□□□ -1.22
SNRNP27-204ENST00000487029 MKRN1Q9UHC7 482 aaKnown RBP7.42□□□□□ -1.22
SNRNP27-204ENST00000487029 LGR5O75473 907 aa7.41□□□□□ -1.22
SNRNP27-204ENST00000487029 ALX3O95076 343 aa7.41□□□□□ -1.22
SNRNP27-204ENST00000487029 IER5Q5VY09 327 aa7.41□□□□□ -1.22
SNRNP27-204ENST00000487029 IGF2-ASQ6U949 168 aa7.41□□□□□ -1.22
SNRNP27-204ENST00000487029 KRT25Q7Z3Z0 450 aa7.41□□□□□ -1.22
SNRNP27-204ENST00000487029 TARSP26639 723 aaKnown RBP7.4□□□□□ -1.22
SNRNP27-204ENST00000487029 SSTR4P31391 388 aa7.4□□□□□ -1.22
SNRNP27-204ENST00000487029 WFDC8Q8IUA0 241 aa7.4□□□□□ -1.22
SNRNP27-204ENST00000487029 DZIP1LQ8IYY4 767 aaKnown RBP7.4□□□□□ -1.22
SNRNP27-204ENST00000487029 PCMTD2Q9NV79 361 aa7.4□□□□□ -1.22
SNRNP27-204ENST00000487029 FRRS1LQ9P0K9 344 aa7.4□□□□□ -1.22
SNRNP27-204ENST00000487029 COL17A1Q9UMD9 1497 aaPredicted RBP7.4□□□□□ -1.22
SNRNP27-204ENST00000487029 TGFBR3LH3BV60 316 aa7.39□□□□□ -1.23
SNRNP27-204ENST00000487029 DLL1O00548 723 aa7.39□□□□□ -1.23
SNRNP27-204ENST00000487029 ATP9BO43861 1147 aa7.39□□□□□ -1.23
SNRNP27-204ENST00000487029 MAP3K6O95382 1288 aa7.39□□□□□ -1.23
SNRNP27-204ENST00000487029 FSTP19883 344 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms