RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 NTSR2O95665 410 aa12.08□□□□□ -0.48
MCF2L-227ENST00000486806 CASP7P55210 303 aa12.08□□□□□ -0.48
MCF2L-227ENST00000486806 NFIXQ14938 502 aa12.08□□□□□ -0.48
MCF2L-227ENST00000486806 EXOC6Q8TAG9 804 aa12.08□□□□□ -0.48
MCF2L-227ENST00000486806 ZBTB40Q9NUA8 1239 aa12.08□□□□□ -0.48
MCF2L-227ENST00000486806 MSH5O43196 834 aa12.07□□□□□ -0.48
MCF2L-227ENST00000486806 NEFLP07196 543 aa12.07□□□□□ -0.48
MCF2L-227ENST00000486806 NBPF7P0C2Y1 421 aaPredicted RBP12.07□□□□□ -0.48
MCF2L-227ENST00000486806 TM4SF1P30408 202 aa12.07□□□□□ -0.48
MCF2L-227ENST00000486806 DDR1Q08345 913 aa12.07□□□□□ -0.48
MCF2L-227ENST00000486806 R3HDM1Q15032 1099 aaKnown RBP12.07□□□□□ -0.48
MCF2L-227ENST00000486806 SUSD4Q5VX71 490 aa12.07□□□□□ -0.48
MCF2L-227ENST00000486806 NLGN1Q8N2Q7 840 aa12.07□□□□□ -0.48
MCF2L-227ENST00000486806 AFDNP55196 1824 aaKnown RBP12.07□□□□□ -0.48
MCF2L-227ENST00000486806 H7C1W4 665 aa12.06□□□□□ -0.48
MCF2L-227ENST00000486806 POLRMTO00411 1230 aaKnown RBP12.06□□□□□ -0.48
MCF2L-227ENST00000486806 PCCAP05165 728 aaPredicted RBP12.06□□□□□ -0.48
MCF2L-227ENST00000486806 ZBTB38Q8NAP3 1195 aaPredicted RBP12.06□□□□□ -0.48
MCF2L-227ENST00000486806 SLC16A10Q8TF71 515 aa12.06□□□□□ -0.48
MCF2L-227ENST00000486806 SETDB2Q96T68 719 aa12.06□□□□□ -0.48
MCF2L-227ENST00000486806 CDHR2Q9BYE9 1310 aa12.06□□□□□ -0.48
MCF2L-227ENST00000486806 NRXN2Q9P2S2 1712 aa12.06□□□□□ -0.48
MCF2L-227ENST00000486806 ABCC12Q96J65 1359 aa12.05□□□□□ -0.48
MCF2L-227ENST00000486806 RIC1Q4ADV7 1423 aa12.05□□□□□ -0.48
MCF2L-227ENST00000486806 SOCS7O14512 581 aa12.05□□□□□ -0.48
MCF2L-227ENST00000486806 GNAI3P08754 354 aa12.05□□□□□ -0.48
MCF2L-227ENST00000486806 UBTFL1P0CB47 393 aaPredicted RBP12.05□□□□□ -0.48
MCF2L-227ENST00000486806 AAMPQ13685 434 aa12.05□□□□□ -0.48
MCF2L-227ENST00000486806 BICDL1Q6ZP65 573 aa12.05□□□□□ -0.48
MCF2L-227ENST00000486806 UBE3BQ7Z3V4 1068 aa12.05□□□□□ -0.48
MCF2L-227ENST00000486806 PPP1R42Q7Z4L9 355 aa12.05□□□□□ -0.48
MCF2L-227ENST00000486806 KAZALD1Q96I82 304 aa12.05□□□□□ -0.48
MCF2L-227ENST00000486806 UTP14AQ9BVJ6 771 aaKnown RBP12.05□□□□□ -0.48
MCF2L-227ENST00000486806 CHMP4BQ9H444 224 aaKnown RBP12.05□□□□□ -0.48
MCF2L-227ENST00000486806 C9orf78Q9NZ63 289 aaPredicted RBP12.05□□□□□ -0.48
MCF2L-227ENST00000486806 SH3TC1Q8TE82 1336 aa12.05□□□□□ -0.48
MCF2L-227ENST00000486806 LAMB2P55268 1798 aa12.05□□□□□ -0.48
MCF2L-227ENST00000486806 MSL1Q68DK7 614 aa12.04□□□□□ -0.48
MCF2L-227ENST00000486806 FAM89AQ96GI7 184 aa12.04□□□□□ -0.48
MCF2L-227ENST00000486806 SUCLG2Q96I99 432 aa12.04□□□□□ -0.48
MCF2L-227ENST00000486806 PLA2G12BQ9BX93 195 aa12.04□□□□□ -0.48
MCF2L-227ENST00000486806 NYXQ9GZU5 481 aa12.04□□□□□ -0.48
MCF2L-227ENST00000486806 TRMT112Q9UI30 125 aaKnown RBP12.04□□□□□ -0.48
MCF2L-227ENST00000486806 PSDA5PKW4 1024 aaPredicted RBP12.03□□□□□ -0.48
MCF2L-227ENST00000486806 GNAI2P04899 355 aa12.03□□□□□ -0.48
MCF2L-227ENST00000486806 MMP10P09238 476 aa12.03□□□□□ -0.48
MCF2L-227ENST00000486806 ERICH6BQ5W0A0 696 aa12.03□□□□□ -0.48
MCF2L-227ENST00000486806 NBPF5PQ86XG9 351 aaPredicted RBP12.03□□□□□ -0.48
MCF2L-227ENST00000486806 MTFR1LQ9H019 292 aa12.03□□□□□ -0.48
MCF2L-227ENST00000486806 C1orf115Q9H7X2 142 aa12.03□□□□□ -0.48
MCF2L-227ENST00000486806 SERPINB2P05120 415 aa12.02□□□□□ -0.49
MCF2L-227ENST00000486806 RABL6Q3YEC7 729 aaPredicted RBP12.02□□□□□ -0.49
MCF2L-227ENST00000486806 PRR5LQ6MZQ0 368 aa12.02□□□□□ -0.49
MCF2L-227ENST00000486806 NUTM1Q86Y26 1132 aa12.02□□□□□ -0.49
MCF2L-227ENST00000486806 SYNE4Q8N205 404 aa12.02□□□□□ -0.49
MCF2L-227ENST00000486806 ANKRD44Q8N8A2 993 aa12.02□□□□□ -0.49
MCF2L-227ENST00000486806 CNBD1Q8NA66 436 aa12.02□□□□□ -0.49
MCF2L-227ENST00000486806 JARID2Q92833 1246 aaPredicted RBP12.02□□□□□ -0.49
MCF2L-227ENST00000486806 LRRFIP2Q9Y608 721 aaKnown RBP12.02□□□□□ -0.49
MCF2L-227ENST00000486806 TNRC6CQ9HCJ0 1690 aaKnown RBP12.02□□□□□ -0.49
MCF2L-227ENST00000486806 DDX60Q8IY21 1712 aaKnown RBP12.02□□□□□ -0.49
MCF2L-227ENST00000486806 FAM177BA6PVY3 158 aa12.01□□□□□ -0.49
MCF2L-227ENST00000486806 IRS4O14654 1257 aaPredicted RBP12.01□□□□□ -0.49
MCF2L-227ENST00000486806 ZBTB7AO95365 584 aa12.01□□□□□ -0.49
MCF2L-227ENST00000486806 FOXO4P98177 505 aa12.01□□□□□ -0.49
MCF2L-227ENST00000486806 MTX1Q13505 466 aa12.01□□□□□ -0.49
MCF2L-227ENST00000486806 ERFEQ4G0M1 354 aa12.01□□□□□ -0.49
MCF2L-227ENST00000486806 RTL5Q5HYW3 569 aaPredicted RBP12.01□□□□□ -0.49
MCF2L-227ENST00000486806 EPHA10Q5JZY3 1008 aa12.01□□□□□ -0.49
MCF2L-227ENST00000486806 SLC10A5Q5PT55 438 aa12.01□□□□□ -0.49
MCF2L-227ENST00000486806 CEP85Q6P2H3 762 aa12.01□□□□□ -0.49
MCF2L-227ENST00000486806 TPTE2Q6XPS3 522 aa12.01□□□□□ -0.49
MCF2L-227ENST00000486806 SGIP1Q9BQI5 828 aa12.01□□□□□ -0.49
MCF2L-227ENST00000486806 BICC1Q9H694 974 aaKnown RBP12.01□□□□□ -0.49
MCF2L-227ENST00000486806 PCDHB15Q9Y5E8 787 aa12.01□□□□□ -0.49
MCF2L-227ENST00000486806 C10orf71Q711Q0 1435 aa12.01□□□□□ -0.49
MCF2L-227ENST00000486806 CTSWP56202 376 aa12□□□□□ -0.49
MCF2L-227ENST00000486806 HDAC5Q9UQL6 1122 aa12□□□□□ -0.49
MCF2L-227ENST00000486806 PARP3Q9Y6F1 533 aa12□□□□□ -0.49
MCF2L-227ENST00000486806 LRP5O75197 1615 aa12□□□□□ -0.49
MCF2L-227ENST00000486806 PDE8AO60658 829 aa11.99□□□□□ -0.49
MCF2L-227ENST00000486806 CSF1RP07333 972 aa11.99□□□□□ -0.49
MCF2L-227ENST00000486806 HCLS1P14317 486 aaPredicted RBP11.99□□□□□ -0.49
MCF2L-227ENST00000486806 ST5P78524 1137 aa11.99□□□□□ -0.49
MCF2L-227ENST00000486806 C3orf67Q6ZVT6 689 aa11.99□□□□□ -0.49
MCF2L-227ENST00000486806 SIRT2Q8IXJ6 389 aa11.99□□□□□ -0.49
MCF2L-227ENST00000486806 RTL9Q8NET4 1388 aa11.99□□□□□ -0.49
MCF2L-227ENST00000486806 PNMA6EA0A0J9YXQ4 647 aa11.98□□□□□ -0.49
MCF2L-227ENST00000486806 KLRG2A4D1S0 409 aaPredicted RBP11.98□□□□□ -0.49
MCF2L-227ENST00000486806 HSP90B1P14625 803 aaKnown RBP11.98□□□□□ -0.49
MCF2L-227ENST00000486806 PTGER2P43116 358 aa11.98□□□□□ -0.49
MCF2L-227ENST00000486806 RPAP2Q8IXW5 612 aaPredicted RBP11.98□□□□□ -0.49
MCF2L-227ENST00000486806 GTF2E1P29083 439 aaPredicted RBP11.97□□□□□ -0.49
MCF2L-227ENST00000486806 ATP8B2P98198 1209 aa11.97□□□□□ -0.49
MCF2L-227ENST00000486806 HDAC1Q13547 482 aaPredicted RBP11.97□□□□□ -0.49
MCF2L-227ENST00000486806 POLA2Q14181 598 aa11.97□□□□□ -0.49
MCF2L-227ENST00000486806 SF3B3Q15393 1217 aaKnown RBP11.97□□□□□ -0.49
MCF2L-227ENST00000486806 CRY2Q49AN0 593 aa11.97□□□□□ -0.49
MCF2L-227ENST00000486806 LMBR1LQ6UX01 489 aa11.97□□□□□ -0.49
MCF2L-227ENST00000486806 CCDC24Q8N4L8 307 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms