RNA–Protein interactions for RNA: ENST00000486704.1

HDAC8-218, Transcript of histone deacetylase 8, humanhuman

TSL 2

Gene HDAC8, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-218ENST00000486704 ANKRD13DQ6ZTN6 518 aa20.61■□□□□ 0.89
HDAC8-218ENST00000486704 TSPYL6Q8N831 410 aa20.61■□□□□ 0.89
HDAC8-218ENST00000486704 NLRP10Q86W26 655 aa20.6■□□□□ 0.89
HDAC8-218ENST00000486704 UTP14AQ9BVJ6 771 aaKnown RBP20.6■□□□□ 0.89
HDAC8-218ENST00000486704 ZC3H4Q9UPT8 1303 aaKnown RBP20.59■□□□□ 0.89
HDAC8-218ENST00000486704 NFKBIEO00221 500 aa20.59■□□□□ 0.89
HDAC8-218ENST00000486704 SOGA3Q5TF21 947 aa20.59■□□□□ 0.89
HDAC8-218ENST00000486704 C9orf131Q5VYM1 1079 aa20.59■□□□□ 0.89
HDAC8-218ENST00000486704 LTBP3Q9NS15 1303 aa20.58■□□□□ 0.89
HDAC8-218ENST00000486704 CCER2I3L3R5 266 aa20.58■□□□□ 0.89
HDAC8-218ENST00000486704 RASSF7Q02833 373 aa20.58■□□□□ 0.89
HDAC8-218ENST00000486704 TWISTNBQ3B726 338 aaPredicted RBP20.58■□□□□ 0.89
HDAC8-218ENST00000486704 ZNF521Q96K83 1311 aa20.57■□□□□ 0.88
HDAC8-218ENST00000486704 C21orf2O43822 256 aa20.57■□□□□ 0.88
HDAC8-218ENST00000486704 GOLGA2Q08379 1002 aa20.57■□□□□ 0.88
HDAC8-218ENST00000486704 SLC10A5Q5PT55 438 aa20.57■□□□□ 0.88
HDAC8-218ENST00000486704 C7orf43Q8WVR3 580 aa20.57■□□□□ 0.88
HDAC8-218ENST00000486704 ISCA1Q9BUE6 129 aa20.57■□□□□ 0.88
HDAC8-218ENST00000486704 PHAXQ9H814 394 aaKnown RBP20.57■□□□□ 0.88
HDAC8-218ENST00000486704 RNF181Q9P0P0 153 aa20.57■□□□□ 0.88
HDAC8-218ENST00000486704 SALL2Q9Y467 1007 aaPredicted RBP20.57■□□□□ 0.88
HDAC8-218ENST00000486704 LMNB1P20700 586 aa20.56■□□□□ 0.88
HDAC8-218ENST00000486704 ALDH1B1P30837 517 aa20.56■□□□□ 0.88
HDAC8-218ENST00000486704 HOXA10P31260 410 aaPredicted RBP20.56■□□□□ 0.88
HDAC8-218ENST00000486704 GPBP1L1Q9HC44 474 aaPredicted RBP20.56■□□□□ 0.88
HDAC8-218ENST00000486704 SNED1Q8TER0 1413 aa20.55■□□□□ 0.88
HDAC8-218ENST00000486704 TRIM28Q13263 835 aaKnown RBP20.55■□□□□ 0.88
HDAC8-218ENST00000486704 STK31Q9BXU1 1019 aa20.55■□□□□ 0.88
HDAC8-218ENST00000486704 SH3TC1Q8TE82 1336 aa20.54■□□□□ 0.88
HDAC8-218ENST00000486704 PRELPP51888 382 aa20.54■□□□□ 0.88
HDAC8-218ENST00000486704 CCDC93Q567U6 631 aa20.54■□□□□ 0.88
HDAC8-218ENST00000486704 RPGRQ92834 1020 aaKnown RBP20.54■□□□□ 0.88
HDAC8-218ENST00000486704 DDX58O95786 925 aaKnown RBP20.53■□□□□ 0.88
HDAC8-218ENST00000486704 RIC3Q7Z5B4 369 aa20.53■□□□□ 0.88
HDAC8-218ENST00000486704 NLRP3Q96P20 1036 aa20.53■□□□□ 0.88
HDAC8-218ENST00000486704 CRAMP1Q96RY5 1269 aa20.53■□□□□ 0.88
HDAC8-218ENST00000486704 TAOK3Q9H2K8 898 aa20.53■□□□□ 0.88
HDAC8-218ENST00000486704 MYH16Q9H6N6 1097 aa20.53■□□□□ 0.88
HDAC8-218ENST00000486704 SPINK5Q9NQ38 1064 aaPredicted RBP20.53■□□□□ 0.88
HDAC8-218ENST00000486704 ZNF219Q9P2Y4 722 aaPredicted RBP20.53■□□□□ 0.88
HDAC8-218ENST00000486704 TRMT112Q9UI30 125 aaKnown RBP20.53■□□□□ 0.88
HDAC8-218ENST00000486704 LRRC37AA6NMS7 1700 aa20.53■□□□□ 0.88
HDAC8-218ENST00000486704 C3orf67Q6ZVT6 689 aa20.52■□□□□ 0.88
HDAC8-218ENST00000486704 MYH3P11055 1940 aa20.52■□□□□ 0.88
HDAC8-218ENST00000486704 TAF1P21675 1872 aa20.52■□□□□ 0.87
HDAC8-218ENST00000486704 ZNF526Q8TF50 670 aaPredicted RBP20.51■□□□□ 0.87
HDAC8-218ENST00000486704 RBM17Q96I25 401 aaKnown RBP20.51■□□□□ 0.87
HDAC8-218ENST00000486704 ATP5J2-PTCD1G3V325 749 aa20.5■□□□□ 0.87
HDAC8-218ENST00000486704 EXOSC9Q06265 439 aaKnown RBP20.5■□□□□ 0.87
HDAC8-218ENST00000486704 VAMP4O75379 141 aa20.49■□□□□ 0.87
HDAC8-218ENST00000486704 CC2D2BQ6DHV5 1058 aa20.49■□□□□ 0.87
HDAC8-218ENST00000486704 RTKN2Q8IZC4 609 aa20.49■□□□□ 0.87
HDAC8-218ENST00000486704 METTL22Q9BUU2 404 aaPredicted RBP20.49■□□□□ 0.87
HDAC8-218ENST00000486704 WDR90Q96KV7 1748 aa20.48■□□□□ 0.87
HDAC8-218ENST00000486704 HCLS1P14317 486 aaPredicted RBP20.48■□□□□ 0.87
HDAC8-218ENST00000486704 FKBP4Q02790 459 aaKnown RBP eCLIP20.48■□□□□ 0.87
HDAC8-218ENST00000486704 KSR2Q6VAB6 950 aa20.48■□□□□ 0.87
HDAC8-218ENST00000486704 SYNE4Q8N205 404 aa20.48■□□□□ 0.87
HDAC8-218ENST00000486704 CCDC191Q8NCU4 936 aa20.48■□□□□ 0.87
HDAC8-218ENST00000486704 MYD88Q99836 296 aa20.48■□□□□ 0.87
HDAC8-218ENST00000486704 KDM2BQ8NHM5 1336 aa20.48■□□□□ 0.87
HDAC8-218ENST00000486704 SLC4A2P04920 1241 aa20.47■□□□□ 0.87
HDAC8-218ENST00000486704 C1QTNF8P60827 252 aa20.47■□□□□ 0.87
HDAC8-218ENST00000486704 GRIPAP1Q4V328 841 aa20.47■□□□□ 0.87
HDAC8-218ENST00000486704 MAP3K2Q9Y2U5 619 aa20.47■□□□□ 0.87
HDAC8-218ENST00000486704 ABCC4O15439 1325 aa20.47■□□□□ 0.87
HDAC8-218ENST00000486704 PI4KAP2A4QPH2 592 aa20.46■□□□□ 0.87
HDAC8-218ENST00000486704 KIF3CO14782 793 aa20.46■□□□□ 0.87
HDAC8-218ENST00000486704 PPEF1O14829 653 aaPredicted RBP20.46■□□□□ 0.87
HDAC8-218ENST00000486704 PI4KAP1Q8N8J0 262 aa20.46■□□□□ 0.87
HDAC8-218ENST00000486704 ZBTB38Q8NAP3 1195 aaPredicted RBP20.46■□□□□ 0.87
HDAC8-218ENST00000486704 FAM89AQ96GI7 184 aa20.46■□□□□ 0.87
HDAC8-218ENST00000486704 TCERG1O14776 1098 aaKnown RBP20.45■□□□□ 0.86
HDAC8-218ENST00000486704 FLIIQ13045 1269 aa20.45■□□□□ 0.86
HDAC8-218ENST00000486704 OLFM4Q6UX06 510 aa20.45■□□□□ 0.86
HDAC8-218ENST00000486704 G2E3Q7L622 706 aa20.45■□□□□ 0.86
HDAC8-218ENST00000486704 PSMD1Q99460 953 aa20.45■□□□□ 0.86
HDAC8-218ENST00000486704 CWC25Q9NXE8 425 aaPredicted RBP20.45■□□□□ 0.86
HDAC8-218ENST00000486704 PCCAP05165 728 aaPredicted RBP20.44■□□□□ 0.86
HDAC8-218ENST00000486704 HSP90B1P14625 803 aaKnown RBP20.44■□□□□ 0.86
HDAC8-218ENST00000486704 SF3B3Q15393 1217 aaKnown RBP20.44■□□□□ 0.86
HDAC8-218ENST00000486704 GLTPD2A6NH11 291 aa20.43■□□□□ 0.86
HDAC8-218ENST00000486704 E9PSI1 815 aa20.43■□□□□ 0.86
HDAC8-218ENST00000486704 IRS4O14654 1257 aaPredicted RBP20.43■□□□□ 0.86
HDAC8-218ENST00000486704 NMRK2Q9NPI5 230 aa20.43■□□□□ 0.86
HDAC8-218ENST00000486704 ATP6V0A2Q9Y487 856 aa20.43■□□□□ 0.86
HDAC8-218ENST00000486704 LTBP1Q14766 1721 aa20.43■□□□□ 0.86
HDAC8-218ENST00000486704 COL4A1P02462 1669 aa20.42■□□□□ 0.86
HDAC8-218ENST00000486704 BBOX1O75936 387 aa20.42■□□□□ 0.86
HDAC8-218ENST00000486704 IGKV5-2P06315 115 aa20.42■□□□□ 0.86
HDAC8-218ENST00000486704 NEXNQ0ZGT2 675 aa20.42■□□□□ 0.86
HDAC8-218ENST00000486704 GRAPQ13588 217 aa20.42■□□□□ 0.86
HDAC8-218ENST00000486704 DIEXFQ68CQ4 756 aaKnown RBP20.42■□□□□ 0.86
HDAC8-218ENST00000486704 DDX46Q7L014 1031 aaKnown RBP20.42■□□□□ 0.86
HDAC8-218ENST00000486704 GRAPLQ8TC17 118 aaPredicted RBP20.42■□□□□ 0.86
HDAC8-218ENST00000486704 ZNF428Q96B54 188 aa20.42■□□□□ 0.86
HDAC8-218ENST00000486704 CDHR2Q9BYE9 1310 aa20.42■□□□□ 0.86
HDAC8-218ENST00000486704 SCN4AP35499 1836 aa20.41■□□□□ 0.86
HDAC8-218ENST00000486704 FKBP5Q13451 457 aaPredicted RBP20.41■□□□□ 0.86
HDAC8-218ENST00000486704 TMC4Q7Z404 712 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms