RNA–Protein interactions for RNA: ENST00000486695.1

KIFC1-213, Transcript of kinesin family member C1, human

TSL 3

Gene KIFC1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC1-213	ENST00000486695	ERVV-1	B6SEH8	477 aa		11.22	□□□□□ -0.61
KIFC1-213	ENST00000486695	RAB11FIP3	O75154	756 aa		11.22	□□□□□ -0.61
KIFC1-213	ENST00000486695	EIF5	P55010	431 aa	Known RBP	11.22	□□□□□ -0.61
KIFC1-213	ENST00000486695	MTX1	Q13505	466 aa		11.22	□□□□□ -0.61
KIFC1-213	ENST00000486695	HSP90AB4P	Q58FF6	505 aa		11.22	□□□□□ -0.61
KIFC1-213	ENST00000486695	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.22	□□□□□ -0.61
KIFC1-213	ENST00000486695	SUCLG2	Q96I99	432 aa		11.22	□□□□□ -0.61
KIFC1-213	ENST00000486695	ISCA1	Q9BUE6	129 aa		11.22	□□□□□ -0.61
KIFC1-213	ENST00000486695		H7C1W4	665 aa		11.21	□□□□□ -0.61
KIFC1-213	ENST00000486695	APBB1	O00213	710 aa		11.21	□□□□□ -0.61
KIFC1-213	ENST00000486695	SURF6	O75683	361 aa	Known RBP	11.21	□□□□□ -0.61
KIFC1-213	ENST00000486695	HMGB2	P26583	209 aa	Known RBP	11.21	□□□□□ -0.61
KIFC1-213	ENST00000486695	PDE4A	P27815	886 aa		11.21	□□□□□ -0.61
KIFC1-213	ENST00000486695	TRIM28	Q13263	835 aa	Known RBP	11.21	□□□□□ -0.61
KIFC1-213	ENST00000486695	POLA2	Q14181	598 aa		11.21	□□□□□ -0.61
KIFC1-213	ENST00000486695	PTF1A	Q7RTS3	328 aa		11.21	□□□□□ -0.61
KIFC1-213	ENST00000486695	UBE3B	Q7Z3V4	1068 aa		11.21	□□□□□ -0.61
KIFC1-213	ENST00000486695	CCNL1	Q9UK58	526 aa	Predicted RBP	11.21	□□□□□ -0.61
KIFC1-213	ENST00000486695	TBC1D2B	Q9UPU7	963 aa		11.21	□□□□□ -0.61
KIFC1-213	ENST00000486695	COL5A3	P25940	1745 aa	Predicted RBP	11.21	□□□□□ -0.62
KIFC1-213	ENST00000486695	CNTNAP4	Q9C0A0	1308 aa		11.2	□□□□□ -0.62
KIFC1-213	ENST00000486695	FAM161A	Q3B820	660 aa		11.2	□□□□□ -0.62
KIFC1-213	ENST00000486695	RC3H1	Q5TC82	1133 aa	Known RBP	11.2	□□□□□ -0.62
KIFC1-213	ENST00000486695	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.2	□□□□□ -0.62
KIFC1-213	ENST00000486695	LRRCC1	Q9C099	1032 aa		11.2	□□□□□ -0.62
KIFC1-213	ENST00000486695	BICC1	Q9H694	974 aa	Known RBP	11.2	□□□□□ -0.62
KIFC1-213	ENST00000486695	EXOC6B	Q9Y2D4	811 aa		11.2	□□□□□ -0.62
KIFC1-213	ENST00000486695	COL15A1	P39059	1388 aa		11.19	□□□□□ -0.62
KIFC1-213	ENST00000486695	OS9	Q13438	667 aa	Predicted RBP	11.19	□□□□□ -0.62
KIFC1-213	ENST00000486695	LINC00116	Q8NCU8	138 aa		11.19	□□□□□ -0.62
KIFC1-213	ENST00000486695	NUP98	P52948	1817 aa		11.19	□□□□□ -0.62
KIFC1-213	ENST00000486695	ANKRD36C	Q5JPF3	1778 aa		11.18	□□□□□ -0.62
KIFC1-213	ENST00000486695	LY75	O60449	1722 aa		11.18	□□□□□ -0.62
KIFC1-213	ENST00000486695	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
KIFC1-213	ENST00000486695	HLF	Q16534	295 aa		11.18	□□□□□ -0.62
KIFC1-213	ENST00000486695	ERC1	Q8IUD2	1116 aa		11.18	□□□□□ -0.62
KIFC1-213	ENST00000486695	JARID2	Q92833	1246 aa	Predicted RBP	11.18	□□□□□ -0.62
KIFC1-213	ENST00000486695	KAZALD1	Q96I82	304 aa		11.18	□□□□□ -0.62
KIFC1-213	ENST00000486695	BACH2	Q9BYV9	841 aa		11.18	□□□□□ -0.62
KIFC1-213	ENST00000486695	BCL11A	Q9H165	835 aa		11.18	□□□□□ -0.62
KIFC1-213	ENST00000486695	ZNF652	Q9Y2D9	606 aa		11.18	□□□□□ -0.62
KIFC1-213	ENST00000486695	NOP58	Q9Y2X3	529 aa	Known RBP	11.18	□□□□□ -0.62
KIFC1-213	ENST00000486695	MYH14	Q7Z406	1995 aa	Known RBP	11.17	□□□□□ -0.62
KIFC1-213	ENST00000486695	SMARCA5	O60264	1052 aa	Predicted RBP	11.17	□□□□□ -0.62
KIFC1-213	ENST00000486695	RPS6KA4	O75676	772 aa		11.17	□□□□□ -0.62
KIFC1-213	ENST00000486695	PCCA	P05165	728 aa	Predicted RBP	11.17	□□□□□ -0.62
KIFC1-213	ENST00000486695	GPT	P24298	496 aa		11.17	□□□□□ -0.62
KIFC1-213	ENST00000486695	CASP7	P55210	303 aa		11.17	□□□□□ -0.62
KIFC1-213	ENST00000486695	NLRP10	Q86W26	655 aa		11.17	□□□□□ -0.62
KIFC1-213	ENST00000486695	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	11.17	□□□□□ -0.62
KIFC1-213	ENST00000486695	KIF1BP	Q96EK5	621 aa		11.17	□□□□□ -0.62
KIFC1-213	ENST00000486695	PLSCR1	O15162	318 aa		11.16	□□□□□ -0.62
KIFC1-213	ENST00000486695	RGL2	O15211	777 aa		11.16	□□□□□ -0.62
KIFC1-213	ENST00000486695	KCNQ4	P56696	695 aa		11.16	□□□□□ -0.62
KIFC1-213	ENST00000486695	RABL6	Q3YEC7	729 aa	Predicted RBP	11.16	□□□□□ -0.62
KIFC1-213	ENST00000486695	PARP10	Q53GL7	1025 aa		11.16	□□□□□ -0.62
KIFC1-213	ENST00000486695	RTL5	Q5HYW3	569 aa	Predicted RBP	11.16	□□□□□ -0.62
KIFC1-213	ENST00000486695	EPHA10	Q5JZY3	1008 aa		11.16	□□□□□ -0.62
KIFC1-213	ENST00000486695	SLC27A3	Q5K4L6	730 aa		11.16	□□□□□ -0.62
KIFC1-213	ENST00000486695	LMBR1L	Q6UX01	489 aa		11.16	□□□□□ -0.62
KIFC1-213	ENST00000486695	ZNF34	Q8IZ26	560 aa		11.16	□□□□□ -0.62
KIFC1-213	ENST00000486695	RHPN1	Q8TCX5	695 aa		11.16	□□□□□ -0.62
KIFC1-213	ENST00000486695	SPON1	Q9HCB6	807 aa		11.16	□□□□□ -0.62
KIFC1-213	ENST00000486695	CHMP3	Q9Y3E7	222 aa		11.16	□□□□□ -0.62
KIFC1-213	ENST00000486695	RTCB	Q9Y3I0	505 aa	Known RBP	11.16	□□□□□ -0.62
KIFC1-213	ENST00000486695	RBM19	Q9Y4C8	960 aa	Known RBP	11.16	□□□□□ -0.62
KIFC1-213	ENST00000486695	CDHR2	Q9BYE9	1310 aa		11.15	□□□□□ -0.62
KIFC1-213	ENST00000486695	TAF1L	Q8IZX4	1826 aa		11.15	□□□□□ -0.62
KIFC1-213	ENST00000486695	GNPAT	O15228	680 aa		11.15	□□□□□ -0.62
KIFC1-213	ENST00000486695	CAMTA2	O94983	1202 aa		11.15	□□□□□ -0.62
KIFC1-213	ENST00000486695	HSP90B1	P14625	803 aa	Known RBP	11.15	□□□□□ -0.62
KIFC1-213	ENST00000486695	FOXO4	P98177	505 aa		11.15	□□□□□ -0.62
KIFC1-213	ENST00000486695	CLEC4G	Q6UXB4	293 aa		11.15	□□□□□ -0.62
KIFC1-213	ENST00000486695	PLEKHM2	Q8IWE5	1019 aa		11.15	□□□□□ -0.62
KIFC1-213	ENST00000486695	C16orf71	Q8IYS4	520 aa	Predicted RBP	11.15	□□□□□ -0.62
KIFC1-213	ENST00000486695	AK7	Q96M32	723 aa		11.15	□□□□□ -0.62
KIFC1-213	ENST00000486695	TRMT112	Q9UI30	125 aa	Known RBP	11.15	□□□□□ -0.62
KIFC1-213	ENST00000486695	ZPR1	O75312	459 aa		11.14	□□□□□ -0.63
KIFC1-213	ENST00000486695	C8orf34	Q49A92	452 aa		11.14	□□□□□ -0.63
KIFC1-213	ENST00000486695	BMP2KL	Q5H9B9	411 aa		11.14	□□□□□ -0.63
KIFC1-213	ENST00000486695	CLASRP	Q8N2M8	674 aa	Known RBP	11.14	□□□□□ -0.63
KIFC1-213	ENST00000486695	FAM89A	Q96GI7	184 aa		11.14	□□□□□ -0.63
KIFC1-213	ENST00000486695	UTP14A	Q9BVJ6	771 aa	Known RBP	11.14	□□□□□ -0.63
KIFC1-213	ENST00000486695	PLA2G12B	Q9BX93	195 aa		11.14	□□□□□ -0.63
KIFC1-213	ENST00000486695	COPRS	Q9NQ92	184 aa		11.14	□□□□□ -0.63
KIFC1-213	ENST00000486695	PPP1R1B	Q9UD71	204 aa	Predicted RBP	11.14	□□□□□ -0.63
KIFC1-213	ENST00000486695	RGPD3	A6NKT7	1758 aa	Predicted RBP	11.13	□□□□□ -0.63
KIFC1-213	ENST00000486695	RGPD4	Q7Z3J3	1758 aa		11.13	□□□□□ -0.63
KIFC1-213	ENST00000486695	CCDC57	Q2TAC2	916 aa		11.13	□□□□□ -0.63
KIFC1-213	ENST00000486695	TRAPPC3L	Q5T215	181 aa		11.13	□□□□□ -0.63
KIFC1-213	ENST00000486695	IL1RAPL2	Q9NP60	686 aa		11.13	□□□□□ -0.63
KIFC1-213	ENST00000486695	NARF	Q9UHQ1	456 aa		11.13	□□□□□ -0.63
KIFC1-213	ENST00000486695	PA2G4	Q9UQ80	394 aa	Known RBP	11.13	□□□□□ -0.63
KIFC1-213	ENST00000486695	NIP7	Q9Y221	180 aa	Known RBP eCLIP	11.13	□□□□□ -0.63
KIFC1-213	ENST00000486695	BCOR	Q6W2J9	1755 aa		11.13	□□□□□ -0.63
KIFC1-213	ENST00000486695	C4B	P0C0L5	1744 aa		11.12	□□□□□ -0.63
KIFC1-213	ENST00000486695	IRS4	O14654	1257 aa	Predicted RBP	11.12	□□□□□ -0.63
KIFC1-213	ENST00000486695	PDE8A	O60658	829 aa		11.12	□□□□□ -0.63
KIFC1-213	ENST00000486695	EIF5B	O60841	1220 aa	Known RBP	11.12	□□□□□ -0.63
KIFC1-213	ENST00000486695	MX1	P20591	662 aa		11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms