RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 COPRSQ9NQ92 184 aa24.79■■□□□ 1.56
HPS3-206ENST00000486530 MAP4K4O95819 1239 aaPredicted RBP24.78■■□□□ 1.56
HPS3-206ENST00000486530 ANAPC15P60006 121 aa24.78■■□□□ 1.56
HPS3-206ENST00000486530 VPS72Q15906 364 aa24.78■■□□□ 1.56
HPS3-206ENST00000486530 MARCH10Q8NA82 808 aaPredicted RBP24.78■■□□□ 1.56
HPS3-206ENST00000486530 CWC25Q9NXE8 425 aaPredicted RBP24.78■■□□□ 1.56
HPS3-206ENST00000486530 H7C1W4 665 aa24.77■■□□□ 1.56
HPS3-206ENST00000486530 RFX5P48382 616 aaPredicted RBP24.77■■□□□ 1.56
HPS3-206ENST00000486530 PRIM1P49642 420 aaKnown RBP24.77■■□□□ 1.56
HPS3-206ENST00000486530 SIL1Q9H173 461 aa24.77■■□□□ 1.56
HPS3-206ENST00000486530 DOT1LQ8TEK3 1739 aa24.75■■□□□ 1.55
HPS3-206ENST00000486530 CCDC191Q8NCU4 936 aa24.75■■□□□ 1.55
HPS3-206ENST00000486530 EAF2Q96CJ1 260 aaPredicted RBP24.75■■□□□ 1.55
HPS3-206ENST00000486530 IL17RAQ96F46 866 aa24.75■■□□□ 1.55
HPS3-206ENST00000486530 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.75■■□□□ 1.55
HPS3-206ENST00000486530 SGSM2O43147 1006 aa24.75■■□□□ 1.55
HPS3-206ENST00000486530 JARID2Q92833 1246 aaPredicted RBP24.75■■□□□ 1.55
HPS3-206ENST00000486530 PTPN12Q05209 780 aaKnown RBP24.74■■□□□ 1.55
HPS3-206ENST00000486530 MEX3CQ5U5Q3 659 aaKnown RBP24.74■■□□□ 1.55
HPS3-206ENST00000486530 DNAJC10Q8IXB1 793 aa24.74■■□□□ 1.55
HPS3-206ENST00000486530 KLHDC4Q8TBB5 520 aa24.74■■□□□ 1.55
HPS3-206ENST00000486530 ZBTB3Q9H5J0 574 aa24.74■■□□□ 1.55
HPS3-206ENST00000486530 SYTL4Q96C24 671 aaPredicted RBP24.73■■□□□ 1.55
HPS3-206ENST00000486530 STARD3NLO95772 234 aa24.72■■□□□ 1.55
HPS3-206ENST00000486530 EVI5LQ96CN4 794 aa24.72■■□□□ 1.55
HPS3-206ENST00000486530 SLC4A9Q96Q91 983 aa24.72■■□□□ 1.55
HPS3-206ENST00000486530 IL25Q9H293 177 aa24.72■■□□□ 1.55
HPS3-206ENST00000486530 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.72■■□□□ 1.55
HPS3-206ENST00000486530 FAM98CQ17RN3 349 aaKnown RBP24.71■■□□□ 1.55
HPS3-206ENST00000486530 IL27Q8NEV9 243 aa24.71■■□□□ 1.55
HPS3-206ENST00000486530 RUFY2Q8WXA3 655 aa24.71■■□□□ 1.55
HPS3-206ENST00000486530 CCDC8Q9H0W5 538 aaPredicted RBP24.71■■□□□ 1.55
HPS3-206ENST00000486530 DIAPH3Q9NSV4 1193 aa24.71■■□□□ 1.55
HPS3-206ENST00000486530 RAD50Q92878 1312 aa24.71■■□□□ 1.55
HPS3-206ENST00000486530 KAT6BQ8WYB5 2073 aa24.71■■□□□ 1.55
HPS3-206ENST00000486530 FOXO4P98177 505 aa24.7■■□□□ 1.55
HPS3-206ENST00000486530 LMBR1LQ6UX01 489 aa24.7■■□□□ 1.54
HPS3-206ENST00000486530 MCM4P33991 863 aa24.69■■□□□ 1.54
HPS3-206ENST00000486530 HSPA4P34932 840 aa24.69■■□□□ 1.54
HPS3-206ENST00000486530 MCM2P49736 904 aa24.69■■□□□ 1.54
HPS3-206ENST00000486530 GSE1Q14687 1217 aa24.69■■□□□ 1.54
HPS3-206ENST00000486530 RAB3GAP1Q15042 981 aa24.69■■□□□ 1.54
HPS3-206ENST00000486530 KIF6Q6ZMV9 814 aa24.69■■□□□ 1.54
HPS3-206ENST00000486530 ISCA1Q9BUE6 129 aa24.69■■□□□ 1.54
HPS3-206ENST00000486530 USP21Q9UK80 565 aa24.69■■□□□ 1.54
HPS3-206ENST00000486530 PALD1Q9ULE6 856 aa24.69■■□□□ 1.54
HPS3-206ENST00000486530 TLR7Q9NYK1 1049 aaKnown RBP24.68■■□□□ 1.54
HPS3-206ENST00000486530 ANKRD36CQ5JPF3 1778 aa24.68■■□□□ 1.54
HPS3-206ENST00000486530 HIP1O00291 1037 aa24.68■■□□□ 1.54
HPS3-206ENST00000486530 CWC27Q6UX04 472 aaKnown RBP24.68■■□□□ 1.54
HPS3-206ENST00000486530 ACSBG1Q96GR2 724 aa24.68■■□□□ 1.54
HPS3-206ENST00000486530 FOXD4L1Q9NU39 408 aa24.68■■□□□ 1.54
HPS3-206ENST00000486530 TCIRG1Q13488 830 aa24.67■■□□□ 1.54
HPS3-206ENST00000486530 KIAA1211Q6ZU35 1233 aa24.67■■□□□ 1.54
HPS3-206ENST00000486530 LSG1Q9H089 658 aaKnown RBP24.67■■□□□ 1.54
HPS3-206ENST00000486530 CYP19A1P11511 503 aaPredicted RBP24.66■■□□□ 1.54
HPS3-206ENST00000486530 NEK4P51957 841 aa24.66■■□□□ 1.54
HPS3-206ENST00000486530 TRIM28Q13263 835 aaKnown RBP24.66■■□□□ 1.54
HPS3-206ENST00000486530 TNNI3KQ59H18 835 aa24.66■■□□□ 1.54
HPS3-206ENST00000486530 FPGT-TNNI3KV9GXZ4 949 aa24.66■■□□□ 1.54
HPS3-206ENST00000486530 TFCP2Q12800 502 aa24.66■■□□□ 1.54
HPS3-206ENST00000486530 CHMP3Q9Y3E7 222 aa24.65■■□□□ 1.54
HPS3-206ENST00000486530 ZNF330Q9Y3S2 320 aaPredicted RBP24.64■■□□□ 1.54
HPS3-206ENST00000486530 DDX11L8A8MPP1 907 aa24.64■■□□□ 1.53
HPS3-206ENST00000486530 TNPO1Q92973 898 aaKnown RBP24.64■■□□□ 1.53
HPS3-206ENST00000486530 CWC22Q9HCG8 908 aaKnown RBP24.64■■□□□ 1.53
HPS3-206ENST00000486530 MAP3K15Q6ZN16 1313 aa24.64■■□□□ 1.53
HPS3-206ENST00000486530 DBNLQ9UJU6 430 aaKnown RBP24.63■■□□□ 1.53
HPS3-206ENST00000486530 GBP4Q96PP9 640 aa24.62■■□□□ 1.53
HPS3-206ENST00000486530 BOLA2Q9H3K6 86 aa24.62■■□□□ 1.53
HPS3-206ENST00000486530 ATP5JP18859 108 aa24.62■■□□□ 1.53
HPS3-206ENST00000486530 PCCAP05165 728 aaPredicted RBP24.6■■□□□ 1.53
HPS3-206ENST00000486530 GIGYF2Q6Y7W6 1299 aaKnown RBP24.6■■□□□ 1.53
HPS3-206ENST00000486530 GPR108Q9NPR9 543 aa24.6■■□□□ 1.53
HPS3-206ENST00000486530 NUP98P52948 1817 aa24.6■■□□□ 1.53
HPS3-206ENST00000486530 RFX7Q2KHR2 1363 aa24.6■■□□□ 1.53
HPS3-206ENST00000486530 CICQ96RK0 1608 aaPredicted RBP24.6■■□□□ 1.53
HPS3-206ENST00000486530 KCNQ2O43526 872 aa24.6■■□□□ 1.53
HPS3-206ENST00000486530 IL15P40933 162 aaPredicted RBP24.6■■□□□ 1.53
HPS3-206ENST00000486530 HSP90AB3PQ58FF7 597 aa24.6■■□□□ 1.53
HPS3-206ENST00000486530 FSD1Q9BTV5 496 aa24.6■■□□□ 1.53
HPS3-206ENST00000486530 NUCB2P80303 420 aa24.59■■□□□ 1.53
HPS3-206ENST00000486530 ATG9AQ7Z3C6 839 aa24.59■■□□□ 1.53
HPS3-206ENST00000486530 PLA2G12BQ9BX93 195 aa24.59■■□□□ 1.53
HPS3-206ENST00000486530 SNRKQ9NRH2 765 aa24.59■■□□□ 1.53
HPS3-206ENST00000486530 MYH3P11055 1940 aa24.58■■□□□ 1.53
HPS3-206ENST00000486530 A0A0G2JS52 829 aa24.58■■□□□ 1.53
HPS3-206ENST00000486530 CIAO1O76071 339 aa24.58■■□□□ 1.53
HPS3-206ENST00000486530 TMX3Q96JJ7 454 aa24.58■■□□□ 1.53
HPS3-206ENST00000486530 SNX14Q9Y5W7 946 aa24.58■■□□□ 1.53
HPS3-206ENST00000486530 ZBTB38Q8NAP3 1195 aaPredicted RBP24.58■■□□□ 1.52
HPS3-206ENST00000486530 AFF2P51816 1311 aa24.57■■□□□ 1.52
HPS3-206ENST00000486530 EYA2O00167 538 aa24.57■■□□□ 1.52
HPS3-206ENST00000486530 DBNDD2Q9BQY9 259 aa24.57■■□□□ 1.52
HPS3-206ENST00000486530 ZBTB1Q9Y2K1 713 aa24.57■■□□□ 1.52
HPS3-206ENST00000486530 CCDC171Q6TFL3 1326 aa24.56■■□□□ 1.52
HPS3-206ENST00000486530 ZNF609O15014 1411 aa24.56■■□□□ 1.52
HPS3-206ENST00000486530 NMIQ13287 307 aaPredicted RBP24.56■■□□□ 1.52
HPS3-206ENST00000486530 GJD4Q96KN9 370 aaPredicted RBP24.56■■□□□ 1.52
HPS3-206ENST00000486530 CDHR2Q9BYE9 1310 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms