RNA–Protein interactions for RNA: ENST00000486524.1

SLX4-203, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 2

Gene SLX4, Length 3,075 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-203ENST00000486524 KCNJ4P48050 445 aa13.58□□□□□ -0.23
SLX4-203ENST00000486524 AK2P54819 239 aa13.58□□□□□ -0.23
SLX4-203ENST00000486524 EDC3Q96F86 508 aaKnown RBP13.58□□□□□ -0.23
SLX4-203ENST00000486524 FSD1Q9BTV5 496 aa13.58□□□□□ -0.23
SLX4-203ENST00000486524 ZNF330Q9Y3S2 320 aaPredicted RBP13.58□□□□□ -0.23
SLX4-203ENST00000486524 WDR17Q8IZU2 1322 aa13.58□□□□□ -0.24
SLX4-203ENST00000486524 NMIQ13287 307 aaPredicted RBP13.58□□□□□ -0.24
SLX4-203ENST00000486524 NBPF26B4DH59 902 aa13.58□□□□□ -0.24
SLX4-203ENST00000486524 A1BGP04217 495 aa13.58□□□□□ -0.24
SLX4-203ENST00000486524 NBPF14Q5TI25 921 aa13.58□□□□□ -0.24
SLX4-203ENST00000486524 NBPF10Q6P3W6 841 aaKnown RBP13.58□□□□□ -0.24
SLX4-203ENST00000486524 NBPF15Q8N660 670 aa13.58□□□□□ -0.24
SLX4-203ENST00000486524 PCDH11XQ9BZA7 1347 aa13.57□□□□□ -0.24
SLX4-203ENST00000486524 PCDH11YQ9BZA8 1340 aa13.57□□□□□ -0.24
SLX4-203ENST00000486524 EVA1CP58658 441 aa13.57□□□□□ -0.24
SLX4-203ENST00000486524 TFCP2Q12800 502 aa13.57□□□□□ -0.24
SLX4-203ENST00000486524 ADCK5Q3MIX3 580 aa13.57□□□□□ -0.24
SLX4-203ENST00000486524 TTLL7Q6ZT98 887 aa13.57□□□□□ -0.24
SLX4-203ENST00000486524 JAKMIP1Q96N16 626 aaKnown RBP13.57□□□□□ -0.24
SLX4-203ENST00000486524 RBM27Q9P2N5 1060 aaKnown RBP13.57□□□□□ -0.24
SLX4-203ENST00000486524 TPRNQ4KMQ1 711 aa13.57□□□□□ -0.24
SLX4-203ENST00000486524 ZBTB3Q9H5J0 574 aa13.57□□□□□ -0.24
SLX4-203ENST00000486524 INTS4Q96HW7 963 aaKnown RBP13.56□□□□□ -0.24
SLX4-203ENST00000486524 MRC1P22897 1456 aa13.56□□□□□ -0.24
SLX4-203ENST00000486524 EPB41L2O43491 1005 aaKnown RBP13.56□□□□□ -0.24
SLX4-203ENST00000486524 PLBD2Q8NHP8 589 aa13.56□□□□□ -0.24
SLX4-203ENST00000486524 GPT2Q8TD30 523 aa13.56□□□□□ -0.24
SLX4-203ENST00000486524 DNAJC5Q9H3Z4 198 aa13.56□□□□□ -0.24
SLX4-203ENST00000486524 XIRP1Q702N8 1843 aaKnown RBP13.56□□□□□ -0.24
SLX4-203ENST00000486524 PKD1L3Q7Z443 1732 aa13.56□□□□□ -0.24
SLX4-203ENST00000486524 A0A0D9SFI3 127 aa13.55□□□□□ -0.24
SLX4-203ENST00000486524 BRD1O95696 1058 aa13.55□□□□□ -0.24
SLX4-203ENST00000486524 PTPN12Q05209 780 aaKnown RBP13.55□□□□□ -0.24
SLX4-203ENST00000486524 LMBR1LQ6UX01 489 aa13.55□□□□□ -0.24
SLX4-203ENST00000486524 RUFY3Q7L099 469 aa13.55□□□□□ -0.24
SLX4-203ENST00000486524 AFDNP55196 1824 aaKnown RBP13.55□□□□□ -0.24
SLX4-203ENST00000486524 IL2RBP14784 551 aa13.55□□□□□ -0.24
SLX4-203ENST00000486524 IL17RAQ96F46 866 aa13.55□□□□□ -0.24
SLX4-203ENST00000486524 TTC14Q96N46 770 aa13.55□□□□□ -0.24
SLX4-203ENST00000486524 GDPD2Q9HCC8 539 aa13.55□□□□□ -0.24
SLX4-203ENST00000486524 NSFL1CQ9UNZ2 370 aaKnown RBP13.55□□□□□ -0.24
SLX4-203ENST00000486524 DBNLQ9UJU6 430 aaKnown RBP13.55□□□□□ -0.24
SLX4-203ENST00000486524 RBM8AQ9Y5S9 174 aaKnown RBP13.55□□□□□ -0.24
SLX4-203ENST00000486524 CCDC171Q6TFL3 1326 aa13.55□□□□□ -0.24
SLX4-203ENST00000486524 LARGE1O95461 756 aa13.54□□□□□ -0.24
SLX4-203ENST00000486524 RFX5P48382 616 aaPredicted RBP13.54□□□□□ -0.24
SLX4-203ENST00000486524 ZSCAN23Q3MJ62 389 aa13.54□□□□□ -0.24
SLX4-203ENST00000486524 DNAJC2Q99543 621 aaKnown RBP13.54□□□□□ -0.24
SLX4-203ENST00000486524 TNNI3KQ59H18 835 aa13.54□□□□□ -0.24
SLX4-203ENST00000486524 COPRSQ9NQ92 184 aa13.54□□□□□ -0.24
SLX4-203ENST00000486524 PDRG1Q9NUG6 133 aa13.54□□□□□ -0.24
SLX4-203ENST00000486524 LIMCH1Q9UPQ0 1083 aa13.54□□□□□ -0.24
SLX4-203ENST00000486524 FPGT-TNNI3KV9GXZ4 949 aa13.54□□□□□ -0.24
SLX4-203ENST00000486524 CHGBP05060 677 aa13.53□□□□□ -0.24
SLX4-203ENST00000486524 COL5A2P05997 1499 aaPredicted RBP13.53□□□□□ -0.24
SLX4-203ENST00000486524 FAM43AQ8N2R8 423 aa13.53□□□□□ -0.24
SLX4-203ENST00000486524 ISY1Q9ULR0 285 aaKnown RBP13.53□□□□□ -0.24
SLX4-203ENST00000486524 SOS2Q07890 1332 aaPredicted RBP13.53□□□□□ -0.24
SLX4-203ENST00000486524 ZKSCAN1P17029 563 aaPredicted RBP13.53□□□□□ -0.24
SLX4-203ENST00000486524 DBNDD2Q9BQY9 259 aa13.53□□□□□ -0.24
SLX4-203ENST00000486524 ARFGEF2Q9Y6D5 1785 aa13.53□□□□□ -0.24
SLX4-203ENST00000486524 COL9A3Q14050 684 aaPredicted RBP13.53□□□□□ -0.24
SLX4-203ENST00000486524 CREB3L3Q68CJ9 461 aa13.53□□□□□ -0.24
SLX4-203ENST00000486524 CCDC83Q8IWF9 413 aa13.53□□□□□ -0.24
SLX4-203ENST00000486524 TCEANC2Q96MN5 208 aa13.53□□□□□ -0.24
SLX4-203ENST00000486524 RRAGDQ9NQL2 400 aaPredicted RBP13.53□□□□□ -0.24
SLX4-203ENST00000486524 ZNF589Q86UQ0 364 aaPredicted RBP13.52□□□□□ -0.24
SLX4-203ENST00000486524 CYP46A1Q9Y6A2 500 aa13.52□□□□□ -0.24
SLX4-203ENST00000486524 ABCC6O95255 1503 aa13.52□□□□□ -0.25
SLX4-203ENST00000486524 ERVV-2B6SEH9 535 aa13.52□□□□□ -0.25
SLX4-203ENST00000486524 HIP1O00291 1037 aa13.52□□□□□ -0.25
SLX4-203ENST00000486524 NECTIN1Q15223 517 aa13.52□□□□□ -0.25
SLX4-203ENST00000486524 RABL6Q3YEC7 729 aaPredicted RBP13.52□□□□□ -0.25
SLX4-203ENST00000486524 NEUROD6Q96NK8 337 aa13.52□□□□□ -0.25
SLX4-203ENST00000486524 CASP7P55210 303 aa13.51□□□□□ -0.25
SLX4-203ENST00000486524 CARD10Q9BWT7 1032 aa13.51□□□□□ -0.25
SLX4-203ENST00000486524 CWC25Q9NXE8 425 aaPredicted RBP13.51□□□□□ -0.25
SLX4-203ENST00000486524 TAF6LQ9Y6J9 622 aa13.51□□□□□ -0.25
SLX4-203ENST00000486524 KAT6BQ8WYB5 2073 aa13.51□□□□□ -0.25
SLX4-203ENST00000486524 NASPP49321 788 aaPredicted RBP13.51□□□□□ -0.25
SLX4-203ENST00000486524 SMC3Q9UQE7 1217 aa13.51□□□□□ -0.25
SLX4-203ENST00000486524 WDR33Q9C0J8 1336 aaKnown RBP13.51□□□□□ -0.25
SLX4-203ENST00000486524 FOXO4P98177 505 aa13.5□□□□□ -0.25
SLX4-203ENST00000486524 DDX46Q7L014 1031 aaKnown RBP13.5□□□□□ -0.25
SLX4-203ENST00000486524 NECAB1Q8N987 351 aa13.5□□□□□ -0.25
SLX4-203ENST00000486524 MAP4K1Q92918 833 aa13.5□□□□□ -0.25
SLX4-203ENST00000486524 ZNF594Q96JF6 807 aaPredicted RBP13.5□□□□□ -0.25
SLX4-203ENST00000486524 TMEM63CQ9P1W3 806 aa13.5□□□□□ -0.25
SLX4-203ENST00000486524 RPAP1Q9BWH6 1393 aaPredicted RBP13.5□□□□□ -0.25
SLX4-203ENST00000486524 SLC27A2O14975 620 aa13.5□□□□□ -0.25
SLX4-203ENST00000486524 CCDC85AQ96PX6 553 aaPredicted RBP13.5□□□□□ -0.25
SLX4-203ENST00000486524 ZSWIM6Q9HCJ5 1215 aa13.5□□□□□ -0.25
SLX4-203ENST00000486524 GLI3P10071 1580 aa13.5□□□□□ -0.25
SLX4-203ENST00000486524 PARP4Q9UKK3 1724 aaKnown RBP13.5□□□□□ -0.25
SLX4-203ENST00000486524 SYCE3A1L190 88 aa13.5□□□□□ -0.25
SLX4-203ENST00000486524 CCDC129Q6ZRS4 1044 aa13.5□□□□□ -0.25
SLX4-203ENST00000486524 TMOD3Q9NYL9 352 aa13.5□□□□□ -0.25
SLX4-203ENST00000486524 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.5□□□□□ -0.25
SLX4-203ENST00000486524 H7C1W4 665 aa13.49□□□□□ -0.25
SLX4-203ENST00000486524 PRIM1P49642 420 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms