RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 ZC3H4Q9UPT8 1303 aaKnown RBP16.66■□□□□ 0.26
CHMP3-208ENST00000486404 DDX60Q8IY21 1712 aaKnown RBP16.65■□□□□ 0.26
CHMP3-208ENST00000486404 C1QTNF8P60827 252 aa16.65■□□□□ 0.26
CHMP3-208ENST00000486404 NCBP3Q53F19 620 aaKnown RBP16.65■□□□□ 0.26
CHMP3-208ENST00000486404 WWC1Q8IX03 1113 aa16.65■□□□□ 0.26
CHMP3-208ENST00000486404 TSR2Q969E8 191 aaKnown RBP16.65■□□□□ 0.26
CHMP3-208ENST00000486404 UTP14AQ9BVJ6 771 aaKnown RBP16.65■□□□□ 0.26
CHMP3-208ENST00000486404 TAOK3Q9H2K8 898 aa16.65■□□□□ 0.26
CHMP3-208ENST00000486404 KDM2BQ8NHM5 1336 aa16.65■□□□□ 0.26
CHMP3-208ENST00000486404 KLRG2A4D1S0 409 aaPredicted RBP16.64■□□□□ 0.25
CHMP3-208ENST00000486404 NFKBIEO00221 500 aa16.64■□□□□ 0.25
CHMP3-208ENST00000486404 GOLGA2Q08379 1002 aa16.64■□□□□ 0.25
CHMP3-208ENST00000486404 CCDC93Q567U6 631 aa16.64■□□□□ 0.25
CHMP3-208ENST00000486404 SALL2Q9Y467 1007 aaPredicted RBP16.64■□□□□ 0.25
CHMP3-208ENST00000486404 CACNA1FO60840 1977 aa16.64■□□□□ 0.25
CHMP3-208ENST00000486404 ALDH1B1P30837 517 aa16.63■□□□□ 0.25
CHMP3-208ENST00000486404 PLBD2Q8NHP8 589 aa16.63■□□□□ 0.25
CHMP3-208ENST00000486404 IL16Q14005 1332 aa16.63■□□□□ 0.25
CHMP3-208ENST00000486404 TCIRG1Q13488 830 aa16.62■□□□□ 0.25
CHMP3-208ENST00000486404 CRY2Q49AN0 593 aa16.62■□□□□ 0.25
CHMP3-208ENST00000486404 CCDC30Q5VVM6 783 aa16.62■□□□□ 0.25
CHMP3-208ENST00000486404 ANKRD13DQ6ZTN6 518 aa16.62■□□□□ 0.25
CHMP3-208ENST00000486404 C8orf58Q8NAV2 365 aa16.62■□□□□ 0.25
CHMP3-208ENST00000486404 LTBP3Q9NS15 1303 aa16.62■□□□□ 0.25
CHMP3-208ENST00000486404 NLRP10Q86W26 655 aa16.61■□□□□ 0.25
CHMP3-208ENST00000486404 RBM17Q96I25 401 aaKnown RBP16.61■□□□□ 0.25
CHMP3-208ENST00000486404 STK31Q9BXU1 1019 aa16.61■□□□□ 0.25
CHMP3-208ENST00000486404 TRMT112Q9UI30 125 aaKnown RBP16.61■□□□□ 0.25
CHMP3-208ENST00000486404 SH3TC1Q8TE82 1336 aa16.61■□□□□ 0.25
CHMP3-208ENST00000486404 RIC3Q7Z5B4 369 aa16.6■□□□□ 0.25
CHMP3-208ENST00000486404 NLRP3Q96P20 1036 aa16.6■□□□□ 0.25
CHMP3-208ENST00000486404 FANCIQ9NVI1 1328 aa16.6■□□□□ 0.25
CHMP3-208ENST00000486404 DDX58O95786 925 aaKnown RBP16.59■□□□□ 0.25
CHMP3-208ENST00000486404 TWISTNBQ3B726 338 aaPredicted RBP16.59■□□□□ 0.25
CHMP3-208ENST00000486404 C16orf71Q8IYS4 520 aaPredicted RBP16.59■□□□□ 0.25
CHMP3-208ENST00000486404 NMRK2Q9NPI5 230 aa16.59■□□□□ 0.25
CHMP3-208ENST00000486404 PPEF1O14829 653 aaPredicted RBP16.58■□□□□ 0.24
CHMP3-208ENST00000486404 WDR63Q8IWG1 891 aa16.58■□□□□ 0.24
CHMP3-208ENST00000486404 RTKN2Q8IZC4 609 aa16.58■□□□□ 0.24
CHMP3-208ENST00000486404 TSPYL6Q8N831 410 aa16.58■□□□□ 0.24
CHMP3-208ENST00000486404 TMX4Q9H1E5 349 aaPredicted RBP16.58■□□□□ 0.24
CHMP3-208ENST00000486404 PHAXQ9H814 394 aaKnown RBP16.58■□□□□ 0.24
CHMP3-208ENST00000486404 MYH3P11055 1940 aa16.57■□□□□ 0.24
CHMP3-208ENST00000486404 TAF1P21675 1872 aa16.57■□□□□ 0.24
CHMP3-208ENST00000486404 ATP5J2-PTCD1G3V325 749 aa16.57■□□□□ 0.24
CHMP3-208ENST00000486404 KIF3CO14782 793 aa16.57■□□□□ 0.24
CHMP3-208ENST00000486404 HOXA10P31260 410 aaPredicted RBP16.57■□□□□ 0.24
CHMP3-208ENST00000486404 PRELPP51888 382 aa16.57■□□□□ 0.24
CHMP3-208ENST00000486404 FKBP4Q02790 459 aaKnown RBP eCLIP16.57■□□□□ 0.24
CHMP3-208ENST00000486404 C3orf67Q6ZVT6 689 aa16.57■□□□□ 0.24
CHMP3-208ENST00000486404 ZNF428Q96B54 188 aa16.57■□□□□ 0.24
CHMP3-208ENST00000486404 WDR90Q96KV7 1748 aa16.56■□□□□ 0.24
CHMP3-208ENST00000486404 HCLS1P14317 486 aaPredicted RBP16.56■□□□□ 0.24
CHMP3-208ENST00000486404 OLFM4Q6UX06 510 aa16.56■□□□□ 0.24
CHMP3-208ENST00000486404 CRAMP1Q96RY5 1269 aa16.56■□□□□ 0.24
CHMP3-208ENST00000486404 MYH16Q9H6N6 1097 aa16.56■□□□□ 0.24
CHMP3-208ENST00000486404 LRRC37AA6NMS7 1700 aa16.56■□□□□ 0.24
CHMP3-208ENST00000486404 ABCC4O15439 1325 aa16.55■□□□□ 0.24
CHMP3-208ENST00000486404 SLC10A5Q5PT55 438 aa16.55■□□□□ 0.24
CHMP3-208ENST00000486404 CC2D2BQ6DHV5 1058 aa16.55■□□□□ 0.24
CHMP3-208ENST00000486404 C7orf43Q8WVR3 580 aa16.55■□□□□ 0.24
CHMP3-208ENST00000486404 MYD88Q99836 296 aa16.55■□□□□ 0.24
CHMP3-208ENST00000486404 ISCA1Q9BUE6 129 aa16.55■□□□□ 0.24
CHMP3-208ENST00000486404 GLTPD2A6NH11 291 aa16.54■□□□□ 0.24
CHMP3-208ENST00000486404 TCERG1O14776 1098 aaKnown RBP16.54■□□□□ 0.24
CHMP3-208ENST00000486404 DPY19L2Q6NUT2 758 aa16.54■□□□□ 0.24
CHMP3-208ENST00000486404 DDX46Q7L014 1031 aaKnown RBP16.54■□□□□ 0.24
CHMP3-208ENST00000486404 ZNF277Q9NRM2 450 aaPredicted RBP16.54■□□□□ 0.24
CHMP3-208ENST00000486404 TOMM70O94826 608 aa16.53■□□□□ 0.24
CHMP3-208ENST00000486404 GRIPAP1Q4V328 841 aa16.53■□□□□ 0.24
CHMP3-208ENST00000486404 FAM89AQ96GI7 184 aa16.53■□□□□ 0.24
CHMP3-208ENST00000486404 SPEF2Q9C093 1822 aa16.53■□□□□ 0.24
CHMP3-208ENST00000486404 SCN4AP35499 1836 aa16.52■□□□□ 0.24
CHMP3-208ENST00000486404 HSP90B1P14625 803 aaKnown RBP16.52■□□□□ 0.24
CHMP3-208ENST00000486404 NEXNQ0ZGT2 675 aa16.52■□□□□ 0.24
CHMP3-208ENST00000486404 RTL5Q5HYW3 569 aaPredicted RBP16.52■□□□□ 0.24
CHMP3-208ENST00000486404 SYNE4Q8N205 404 aa16.52■□□□□ 0.24
CHMP3-208ENST00000486404 CNKSR2Q8WXI2 1034 aa16.52■□□□□ 0.24
CHMP3-208ENST00000486404 PSMD1Q99460 953 aa16.52■□□□□ 0.24
CHMP3-208ENST00000486404 RRAGCQ9HB90 399 aa16.52■□□□□ 0.24
CHMP3-208ENST00000486404 MAP3K2Q9Y2U5 619 aa16.52■□□□□ 0.24
CHMP3-208ENST00000486404 SNED1Q8TER0 1413 aa16.52■□□□□ 0.23
CHMP3-208ENST00000486404 IARSP41252 1262 aaKnown RBP16.51■□□□□ 0.23
CHMP3-208ENST00000486404 EXOSC9Q06265 439 aaKnown RBP16.51■□□□□ 0.23
CHMP3-208ENST00000486404 TRIM28Q13263 835 aaKnown RBP16.51■□□□□ 0.23
CHMP3-208ENST00000486404 MAPK8IP2Q13387 824 aaPredicted RBP16.51■□□□□ 0.23
CHMP3-208ENST00000486404 METTL22Q9BUU2 404 aaPredicted RBP16.51■□□□□ 0.23
CHMP3-208ENST00000486404 CWC25Q9NXE8 425 aaPredicted RBP16.51■□□□□ 0.23
CHMP3-208ENST00000486404 IRS4O14654 1257 aaPredicted RBP16.5■□□□□ 0.23
CHMP3-208ENST00000486404 SLC4A2P04920 1241 aa16.5■□□□□ 0.23
CHMP3-208ENST00000486404 GRAPQ13588 217 aa16.5■□□□□ 0.23
CHMP3-208ENST00000486404 KSR2Q6VAB6 950 aa16.5■□□□□ 0.23
CHMP3-208ENST00000486404 CCDC191Q8NCU4 936 aa16.5■□□□□ 0.23
CHMP3-208ENST00000486404 GRAPLQ8TC17 118 aaPredicted RBP16.5■□□□□ 0.23
CHMP3-208ENST00000486404 JDP2Q8WYK2 163 aa16.5■□□□□ 0.23
CHMP3-208ENST00000486404 ATP6V0A2Q9Y487 856 aa16.5■□□□□ 0.23
CHMP3-208ENST00000486404 PI4KAP2A4QPH2 592 aa16.49■□□□□ 0.23
CHMP3-208ENST00000486404 VEGFAP15692 232 aaPredicted RBP16.49■□□□□ 0.23
CHMP3-208ENST00000486404 PI4KAP1Q8N8J0 262 aa16.49■□□□□ 0.23
CHMP3-208ENST00000486404 ZBTB38Q8NAP3 1195 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms