RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 DDX19BQ9UMR2 479 aa20.02■□□□□ 0.8
APOE-205ENST00000485628 NIP7Q9Y221 180 aaKnown RBP eCLIP20.02■□□□□ 0.8
APOE-205ENST00000485628 NTSR2O95665 410 aa20.01■□□□□ 0.79
APOE-205ENST00000485628 R3HDM1Q15032 1099 aaKnown RBP20.01■□□□□ 0.79
APOE-205ENST00000485628 CRBNQ96SW2 442 aa20.01■□□□□ 0.79
APOE-205ENST00000485628 ZBTB40Q9NUA8 1239 aa20.01■□□□□ 0.79
APOE-205ENST00000485628 CWC25Q9NXE8 425 aaPredicted RBP20.01■□□□□ 0.79
APOE-205ENST00000485628 POLRMTO00411 1230 aaKnown RBP20■□□□□ 0.79
APOE-205ENST00000485628 PCCAP05165 728 aaPredicted RBP20■□□□□ 0.79
APOE-205ENST00000485628 NBPF7P0C2Y1 421 aaPredicted RBP20■□□□□ 0.79
APOE-205ENST00000485628 GPTP24298 496 aa20■□□□□ 0.79
APOE-205ENST00000485628 DDR1Q08345 913 aa20■□□□□ 0.79
APOE-205ENST00000485628 ZBTB38Q8NAP3 1195 aaPredicted RBP20■□□□□ 0.79
APOE-205ENST00000485628 GRM8O00222 908 aa19.99■□□□□ 0.79
APOE-205ENST00000485628 ITPRIPQ8IWB1 547 aa19.99■□□□□ 0.79
APOE-205ENST00000485628 SETDB2Q96T68 719 aa19.99■□□□□ 0.79
APOE-205ENST00000485628 MEIS3Q99687 375 aa19.99■□□□□ 0.79
APOE-205ENST00000485628 CARMIL3Q8ND23 1372 aa19.98■□□□□ 0.79
APOE-205ENST00000485628 SLC10A5Q5PT55 438 aa19.98■□□□□ 0.79
APOE-205ENST00000485628 KAZALD1Q96I82 304 aa19.98■□□□□ 0.79
APOE-205ENST00000485628 CDHR2Q9BYE9 1310 aa19.98■□□□□ 0.79
APOE-205ENST00000485628 AAMPQ13685 434 aa19.97■□□□□ 0.79
APOE-205ENST00000485628 PPP1R42Q7Z4L9 355 aa19.97■□□□□ 0.79
APOE-205ENST00000485628 EXOC6Q8TAG9 804 aa19.97■□□□□ 0.79
APOE-205ENST00000485628 SGIP1Q9BQI5 828 aa19.97■□□□□ 0.79
APOE-205ENST00000485628 PLA2G12BQ9BX93 195 aa19.97■□□□□ 0.79
APOE-205ENST00000485628 MSH5O43196 834 aa19.96■□□□□ 0.79
APOE-205ENST00000485628 SYNE4Q8N205 404 aa19.96■□□□□ 0.79
APOE-205ENST00000485628 UTP14AQ9BVJ6 771 aaKnown RBP19.96■□□□□ 0.79
APOE-205ENST00000485628 RIC1Q4ADV7 1423 aa19.95■□□□□ 0.78
APOE-205ENST00000485628 GNAI3P08754 354 aa19.95■□□□□ 0.78
APOE-205ENST00000485628 BICDL1Q6ZP65 573 aa19.95■□□□□ 0.78
APOE-205ENST00000485628 MTFR1LQ9H019 292 aa19.95■□□□□ 0.78
APOE-205ENST00000485628 DDX60Q8IY21 1712 aaKnown RBP19.95■□□□□ 0.78
APOE-205ENST00000485628 LAMB2P55268 1798 aa19.95■□□□□ 0.78
APOE-205ENST00000485628 SERPINB2P05120 415 aa19.94■□□□□ 0.78
APOE-205ENST00000485628 MMP10P09238 476 aa19.94■□□□□ 0.78
APOE-205ENST00000485628 IRX6P78412 446 aaPredicted RBP19.94■□□□□ 0.78
APOE-205ENST00000485628 FAM89AQ96GI7 184 aa19.94■□□□□ 0.78
APOE-205ENST00000485628 NYXQ9GZU5 481 aa19.94■□□□□ 0.78
APOE-205ENST00000485628 CHMP4BQ9H444 224 aaKnown RBP19.94■□□□□ 0.78
APOE-205ENST00000485628 C9orf78Q9NZ63 289 aaPredicted RBP19.94■□□□□ 0.78
APOE-205ENST00000485628 TRMT112Q9UI30 125 aaKnown RBP19.94■□□□□ 0.78
APOE-205ENST00000485628 PSDA5PKW4 1024 aaPredicted RBP19.93■□□□□ 0.78
APOE-205ENST00000485628 MSL1Q68DK7 614 aa19.93■□□□□ 0.78
APOE-205ENST00000485628 TPTE2Q6XPS3 522 aa19.93■□□□□ 0.78
APOE-205ENST00000485628 UBE3BQ7Z3V4 1068 aa19.93■□□□□ 0.78
APOE-205ENST00000485628 SH3TC1Q8TE82 1336 aa19.93■□□□□ 0.78
APOE-205ENST00000485628 FOXO4P98177 505 aa19.92■□□□□ 0.78
APOE-205ENST00000485628 RABL6Q3YEC7 729 aaPredicted RBP19.92■□□□□ 0.78
APOE-205ENST00000485628 EPHA10Q5JZY3 1008 aa19.92■□□□□ 0.78
APOE-205ENST00000485628 ERICH6BQ5W0A0 696 aa19.92■□□□□ 0.78
APOE-205ENST00000485628 PRR5LQ6MZQ0 368 aa19.92■□□□□ 0.78
APOE-205ENST00000485628 JARID2Q92833 1246 aaPredicted RBP19.92■□□□□ 0.78
APOE-205ENST00000485628 SUCLG2Q96I99 432 aa19.92■□□□□ 0.78
APOE-205ENST00000485628 KLRG2A4D1S0 409 aaPredicted RBP19.91■□□□□ 0.78
APOE-205ENST00000485628 CSF1RP07333 972 aa19.91■□□□□ 0.78
APOE-205ENST00000485628 UBTFL1P0CB47 393 aaPredicted RBP19.91■□□□□ 0.78
APOE-205ENST00000485628 MTX1Q13505 466 aa19.91■□□□□ 0.78
APOE-205ENST00000485628 ERFEQ4G0M1 354 aa19.91■□□□□ 0.78
APOE-205ENST00000485628 NBPF5PQ86XG9 351 aaPredicted RBP19.91■□□□□ 0.78
APOE-205ENST00000485628 ABCC12Q96J65 1359 aa19.91■□□□□ 0.78
APOE-205ENST00000485628 ANKRD31Q8N7Z5 1873 aa19.9■□□□□ 0.78
APOE-205ENST00000485628 MYH3P11055 1940 aa19.9■□□□□ 0.78
APOE-205ENST00000485628 IRS4O14654 1257 aaPredicted RBP19.9■□□□□ 0.78
APOE-205ENST00000485628 GNAI2P04899 355 aa19.9■□□□□ 0.78
APOE-205ENST00000485628 PTGER2P43116 358 aa19.9■□□□□ 0.78
APOE-205ENST00000485628 NUTM1Q86Y26 1132 aa19.9■□□□□ 0.78
APOE-205ENST00000485628 ANKRD44Q8N8A2 993 aa19.9■□□□□ 0.78
APOE-205ENST00000485628 KIF13BQ9NQT8 1826 aa19.9■□□□□ 0.78
APOE-205ENST00000485628 ZBTB7AO95365 584 aa19.89■□□□□ 0.77
APOE-205ENST00000485628 HDAC5Q9UQL6 1122 aa19.89■□□□□ 0.77
APOE-205ENST00000485628 LRRFIP2Q9Y608 721 aaKnown RBP19.89■□□□□ 0.77
APOE-205ENST00000485628 PDE8AO60658 829 aa19.88■□□□□ 0.77
APOE-205ENST00000485628 SIRT2Q8IXJ6 389 aa19.88■□□□□ 0.77
APOE-205ENST00000485628 CNBD1Q8NA66 436 aa19.88■□□□□ 0.77
APOE-205ENST00000485628 PCDHB15Q9Y5E8 787 aa19.88■□□□□ 0.77
APOE-205ENST00000485628 PARP3Q9Y6F1 533 aa19.88■□□□□ 0.77
APOE-205ENST00000485628 FAM177BA6PVY3 158 aa19.87■□□□□ 0.77
APOE-205ENST00000485628 SF3B3Q15393 1217 aaKnown RBP19.87■□□□□ 0.77
APOE-205ENST00000485628 TTLL11Q8NHH1 800 aa19.87■□□□□ 0.77
APOE-205ENST00000485628 BICC1Q9H694 974 aaKnown RBP19.87■□□□□ 0.77
APOE-205ENST00000485628 TNRC6CQ9HCJ0 1690 aaKnown RBP19.87■□□□□ 0.77
APOE-205ENST00000485628 HCLS1P14317 486 aaPredicted RBP19.86■□□□□ 0.77
APOE-205ENST00000485628 ATP8B2P98198 1209 aa19.86■□□□□ 0.77
APOE-205ENST00000485628 CRY2Q49AN0 593 aa19.86■□□□□ 0.77
APOE-205ENST00000485628 RTL5Q5HYW3 569 aaPredicted RBP19.86■□□□□ 0.77
APOE-205ENST00000485628 CEP85Q6P2H3 762 aa19.86■□□□□ 0.77
APOE-205ENST00000485628 C3orf67Q6ZVT6 689 aa19.86■□□□□ 0.77
APOE-205ENST00000485628 RPAP2Q8IXW5 612 aaPredicted RBP19.86■□□□□ 0.77
APOE-205ENST00000485628 ATF5Q9Y2D1 282 aaPredicted RBP19.86■□□□□ 0.77
APOE-205ENST00000485628 C10orf71Q711Q0 1435 aa19.85■□□□□ 0.77
APOE-205ENST00000485628 RTL9Q8NET4 1388 aa19.85■□□□□ 0.77
APOE-205ENST00000485628 HSP90B1P14625 803 aaKnown RBP19.85■□□□□ 0.77
APOE-205ENST00000485628 BRIP1Q9BX63 1249 aa19.85■□□□□ 0.77
APOE-205ENST00000485628 C1orf115Q9H7X2 142 aa19.85■□□□□ 0.77
APOE-205ENST00000485628 NEFLP07196 543 aa19.84■□□□□ 0.77
APOE-205ENST00000485628 CTSWP56202 376 aa19.84■□□□□ 0.77
APOE-205ENST00000485628 POLA2Q14181 598 aa19.84■□□□□ 0.77
APOE-205ENST00000485628 SSH3Q8TE77 659 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms