RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 CC2D1BQ5T0F9 858 aaKnown RBP16.44■□□□□ 0.22
SSR4-210ENST00000485612 CC2D2BQ6DHV5 1058 aa16.44■□□□□ 0.22
SSR4-210ENST00000485612 LARGE2Q8N3Y3 721 aa16.44■□□□□ 0.22
SSR4-210ENST00000485612 FMNL2Q96PY5 1086 aa16.44■□□□□ 0.22
SSR4-210ENST00000485612 ZIC5Q96T25 663 aa16.44■□□□□ 0.22
SSR4-210ENST00000485612 GLIS2Q9BZE0 524 aaPredicted RBP16.44■□□□□ 0.22
SSR4-210ENST00000485612 ZNF408Q9H9D4 720 aa16.44■□□□□ 0.22
SSR4-210ENST00000485612 ADARB2Q9NS39 739 aaKnown RBP16.44■□□□□ 0.22
SSR4-210ENST00000485612 TEFQ10587 303 aa16.43■□□□□ 0.22
SSR4-210ENST00000485612 GPRC5DQ9NZD1 345 aa16.43■□□□□ 0.22
SSR4-210ENST00000485612 NIP7Q9Y221 180 aaKnown RBP eCLIP16.43■□□□□ 0.22
SSR4-210ENST00000485612 COL4A5P29400 1685 aa16.43■□□□□ 0.22
SSR4-210ENST00000485612 PIP4K2AP48426 406 aaPredicted RBP16.42■□□□□ 0.22
SSR4-210ENST00000485612 SNED1Q8TER0 1413 aa16.42■□□□□ 0.22
SSR4-210ENST00000485612 GTF2E1P29083 439 aaPredicted RBP16.41■□□□□ 0.22
SSR4-210ENST00000485612 CNGB1Q14028 1251 aaPredicted RBP16.41■□□□□ 0.22
SSR4-210ENST00000485612 GRIPAP1Q4V328 841 aa16.41■□□□□ 0.22
SSR4-210ENST00000485612 PGAP2Q9UHJ9 254 aa16.41■□□□□ 0.22
SSR4-210ENST00000485612 BCORQ6W2J9 1755 aa16.41■□□□□ 0.22
SSR4-210ENST00000485612 DIAPH1O60610 1272 aaKnown RBP16.4■□□□□ 0.22
SSR4-210ENST00000485612 NIM1KQ8IY84 436 aa16.4■□□□□ 0.22
SSR4-210ENST00000485612 IL17REQ8NFR9 667 aa16.4■□□□□ 0.22
SSR4-210ENST00000485612 SAGE1Q9NXZ1 904 aa16.4■□□□□ 0.22
SSR4-210ENST00000485612 DLG5Q8TDM6 1919 aa16.39■□□□□ 0.21
SSR4-210ENST00000485612 HUNKP57058 714 aa16.39■□□□□ 0.21
SSR4-210ENST00000485612 CDC37L1Q7L3B6 337 aa16.39■□□□□ 0.21
SSR4-210ENST00000485612 USP16Q9Y5T5 823 aa16.39■□□□□ 0.21
SSR4-210ENST00000485612 CRY2Q49AN0 593 aa16.38■□□□□ 0.21
SSR4-210ENST00000485612 ZC3H15Q8WU90 426 aaKnown RBP16.38■□□□□ 0.21
SSR4-210ENST00000485612 GCC1Q96CN9 775 aa16.38■□□□□ 0.21
SSR4-210ENST00000485612 GNAT3A8MTJ3 354 aa16.37■□□□□ 0.21
SSR4-210ENST00000485612 RGL2O15211 777 aa16.37■□□□□ 0.21
SSR4-210ENST00000485612 KCNQ3O43525 872 aa16.37■□□□□ 0.21
SSR4-210ENST00000485612 NBPF15Q8N660 670 aa16.37■□□□□ 0.21
SSR4-210ENST00000485612 RNF186Q9NXI6 227 aa16.37■□□□□ 0.21
SSR4-210ENST00000485612 PPIP5K2O43314 1243 aa16.36■□□□□ 0.21
SSR4-210ENST00000485612 TRPA1O75762 1119 aa16.36■□□□□ 0.21
SSR4-210ENST00000485612 GMPSP49915 693 aaPredicted RBP16.36■□□□□ 0.21
SSR4-210ENST00000485612 CXCL9Q07325 125 aa16.36■□□□□ 0.21
SSR4-210ENST00000485612 CTU1Q7Z7A3 348 aaKnown RBP16.36■□□□□ 0.21
SSR4-210ENST00000485612 RPGRQ92834 1020 aaKnown RBP16.36■□□□□ 0.21
SSR4-210ENST00000485612 NPC1L1Q9UHC9 1359 aa16.36■□□□□ 0.21
SSR4-210ENST00000485612 BTBD11A6QL63 1104 aa16.35■□□□□ 0.21
SSR4-210ENST00000485612 FAM155AB1AL88 458 aaPredicted RBP16.35■□□□□ 0.21
SSR4-210ENST00000485612 TCERG1O14776 1098 aaKnown RBP16.35■□□□□ 0.21
SSR4-210ENST00000485612 HIRAP54198 1017 aaPredicted RBP16.35■□□□□ 0.21
SSR4-210ENST00000485612 KIF23Q02241 960 aaPredicted RBP16.35■□□□□ 0.21
SSR4-210ENST00000485612 RGMBQ6NW40 437 aa16.35■□□□□ 0.21
SSR4-210ENST00000485612 PRAMEF22A3QJZ6 481 aa16.34■□□□□ 0.21
SSR4-210ENST00000485612 U2SURPO15042 1029 aaKnown RBP16.34■□□□□ 0.21
SSR4-210ENST00000485612 HOXA10P31260 410 aaPredicted RBP16.34■□□□□ 0.21
SSR4-210ENST00000485612 HLFQ16534 295 aa16.34■□□□□ 0.21
SSR4-210ENST00000485612 AOC3Q16853 763 aa16.34■□□□□ 0.21
SSR4-210ENST00000485612 USP48Q86UV5 1035 aa16.34■□□□□ 0.21
SSR4-210ENST00000485612 NUTM1Q86Y26 1132 aa16.34■□□□□ 0.21
SSR4-210ENST00000485612 CCDC102AQ96A19 550 aa16.34■□□□□ 0.21
SSR4-210ENST00000485612 NYXQ9GZU5 481 aa16.34■□□□□ 0.21
SSR4-210ENST00000485612 VPS33BQ9H267 617 aa16.34■□□□□ 0.21
SSR4-210ENST00000485612 ZNRF3Q9ULT6 936 aa16.34■□□□□ 0.21
SSR4-210ENST00000485612 PPEF1O14829 653 aaPredicted RBP16.33■□□□□ 0.2
SSR4-210ENST00000485612 SLC51AQ86UW1 340 aa16.33■□□□□ 0.2
SSR4-210ENST00000485612 GAS2L2Q8NHY3 880 aa16.33■□□□□ 0.2
SSR4-210ENST00000485612 RBM17Q96I25 401 aaKnown RBP16.33■□□□□ 0.2
SSR4-210ENST00000485612 BCL2L13Q9BXK5 485 aa16.33■□□□□ 0.2
SSR4-210ENST00000485612 HPS5Q9UPZ3 1129 aa16.33■□□□□ 0.2
SSR4-210ENST00000485612 DLK2Q6UY11 383 aa16.32■□□□□ 0.2
SSR4-210ENST00000485612 CRAMP1Q96RY5 1269 aa16.32■□□□□ 0.2
SSR4-210ENST00000485612 TMX4Q9H1E5 349 aaPredicted RBP16.32■□□□□ 0.2
SSR4-210ENST00000485612 ABCC12Q96J65 1359 aa16.31■□□□□ 0.2
SSR4-210ENST00000485612 NBPF26B4DH59 902 aa16.31■□□□□ 0.2
SSR4-210ENST00000485612 SNRPA1P09661 255 aaKnown RBP16.31■□□□□ 0.2
SSR4-210ENST00000485612 ZNF157P51786 506 aaPredicted RBP16.31■□□□□ 0.2
SSR4-210ENST00000485612 HABP4Q5JVS0 413 aaKnown RBP16.31■□□□□ 0.2
SSR4-210ENST00000485612 NBPF10Q6P3W6 841 aaKnown RBP16.31■□□□□ 0.2
SSR4-210ENST00000485612 TRPM4Q8TD43 1214 aa16.31■□□□□ 0.2
SSR4-210ENST00000485612 LAMB4A4D0S4 1761 aa16.31■□□□□ 0.2
SSR4-210ENST00000485612 CDHR2Q9BYE9 1310 aa16.3■□□□□ 0.2
SSR4-210ENST00000485612 C2orf69Q8N8R5 385 aa16.3■□□□□ 0.2
SSR4-210ENST00000485612 CSRNP1Q96S65 589 aa16.3■□□□□ 0.2
SSR4-210ENST00000485612 GBA2Q9HCG7 927 aaPredicted RBP16.3■□□□□ 0.2
SSR4-210ENST00000485612 CNOT7Q9UIV1 285 aaKnown RBP16.3■□□□□ 0.2
SSR4-210ENST00000485612 H7C1D1 291 aa16.29■□□□□ 0.2
SSR4-210ENST00000485612 TNIP1Q15025 636 aa16.29■□□□□ 0.2
SSR4-210ENST00000485612 PKN2Q16513 984 aaKnown RBP16.29■□□□□ 0.2
SSR4-210ENST00000485612 SUPT20HQ8NEM7 779 aa16.29■□□□□ 0.2
SSR4-210ENST00000485612 PHACTR3Q96KR7 559 aa16.29■□□□□ 0.2
SSR4-210ENST00000485612 CEMIPQ8WUJ3 1361 aa16.28■□□□□ 0.2
SSR4-210ENST00000485612 RAD17O75943 681 aa16.28■□□□□ 0.2
SSR4-210ENST00000485612 ATP6V0A2Q9Y487 856 aa16.28■□□□□ 0.2
SSR4-210ENST00000485612 KDM3BQ7LBC6 1761 aa16.28■□□□□ 0.2
SSR4-210ENST00000485612 NUP98P52948 1817 aa16.27■□□□□ 0.2
SSR4-210ENST00000485612 SHTN1A0MZ66 631 aa16.27■□□□□ 0.2
SSR4-210ENST00000485612 RSPH6AQ9H0K4 717 aa16.27■□□□□ 0.2
SSR4-210ENST00000485612 PRKAR2BP31323 418 aa16.26■□□□□ 0.19
SSR4-210ENST00000485612 KRT26Q7Z3Y9 468 aa16.26■□□□□ 0.19
SSR4-210ENST00000485612 RTFDC1Q9BY42 306 aaPredicted RBP16.26■□□□□ 0.19
SSR4-210ENST00000485612 HDAC9Q9UKV0 1011 aa16.26■□□□□ 0.19
SSR4-210ENST00000485612 RIC1Q4ADV7 1423 aa16.26■□□□□ 0.19
SSR4-210ENST00000485612 SLC10A3P09131 477 aa16.25■□□□□ 0.19
SSR4-210ENST00000485612 MICALL2Q8IY33 904 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms