RNA–Protein interactions for RNA: ENST00000485448.1

PLD3-211, Transcript of phospholipase D family member 3, humanhuman

TSL 1 (best)

Gene PLD3, Length 1,308 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-211ENST00000485448 NUTM1Q86Y26 1132 aa22.22■■□□□ 1.15
PLD3-211ENST00000485448 RPGRQ92834 1020 aaKnown RBP22.22■■□□□ 1.15
PLD3-211ENST00000485448 TRMT112Q9UI30 125 aaKnown RBP22.22■■□□□ 1.15
PLD3-211ENST00000485448 ZC3H4Q9UPT8 1303 aaKnown RBP22.21■■□□□ 1.15
PLD3-211ENST00000485448 ARFGEF1Q9Y6D6 1849 aa22.21■■□□□ 1.15
PLD3-211ENST00000485448 C21orf2O43822 256 aa22.21■■□□□ 1.15
PLD3-211ENST00000485448 CC2D2BQ6DHV5 1058 aa22.21■■□□□ 1.15
PLD3-211ENST00000485448 ADCY9O60503 1353 aa22.2■■□□□ 1.14
PLD3-211ENST00000485448 HOXA10P31260 410 aaPredicted RBP22.2■■□□□ 1.14
PLD3-211ENST00000485448 TSPYL6Q8N831 410 aa22.2■■□□□ 1.14
PLD3-211ENST00000485448 RBM17Q96I25 401 aaKnown RBP22.2■■□□□ 1.14
PLD3-211ENST00000485448 TMX4Q9H1E5 349 aaPredicted RBP22.2■■□□□ 1.14
PLD3-211ENST00000485448 NUP98P52948 1817 aa22.2■■□□□ 1.14
PLD3-211ENST00000485448 SH3TC1Q8TE82 1336 aa22.2■■□□□ 1.14
PLD3-211ENST00000485448 RTKN2Q8IZC4 609 aa22.19■■□□□ 1.14
PLD3-211ENST00000485448 CRAMP1Q96RY5 1269 aa22.19■■□□□ 1.14
PLD3-211ENST00000485448 ISCA1Q9BUE6 129 aa22.19■■□□□ 1.14
PLD3-211ENST00000485448 RNF181Q9P0P0 153 aa22.19■■□□□ 1.14
PLD3-211ENST00000485448 FANCIQ9NVI1 1328 aa22.19■■□□□ 1.14
PLD3-211ENST00000485448 SENP3-EIF4A1A0A087X0R7 540 aa22.18■■□□□ 1.14
PLD3-211ENST00000485448 LTBP3Q9NS15 1303 aa22.18■■□□□ 1.14
PLD3-211ENST00000485448 SLC4A2P04920 1241 aa22.17■■□□□ 1.14
PLD3-211ENST00000485448 CCDC93Q567U6 631 aa22.17■■□□□ 1.14
PLD3-211ENST00000485448 C7orf43Q8WVR3 580 aa22.17■■□□□ 1.14
PLD3-211ENST00000485448 PHAXQ9H814 394 aaKnown RBP22.17■■□□□ 1.14
PLD3-211ENST00000485448 DLEC1Q9Y238 1755 aa22.17■■□□□ 1.14
PLD3-211ENST00000485448 TAOK3Q9H2K8 898 aa22.16■■□□□ 1.14
PLD3-211ENST00000485448 KDM2BQ8NHM5 1336 aa22.16■■□□□ 1.14
PLD3-211ENST00000485448 ANKRD31Q8N7Z5 1873 aa22.16■■□□□ 1.14
PLD3-211ENST00000485448 KSR2Q6VAB6 950 aa22.15■■□□□ 1.14
PLD3-211ENST00000485448 CCDC191Q8NCU4 936 aa22.15■■□□□ 1.14
PLD3-211ENST00000485448 ZNF219Q9P2Y4 722 aaPredicted RBP22.15■■□□□ 1.14
PLD3-211ENST00000485448 VAMP4O75379 141 aa22.14■■□□□ 1.14
PLD3-211ENST00000485448 NEXNQ0ZGT2 675 aa22.14■■□□□ 1.14
PLD3-211ENST00000485448 METTL22Q9BUU2 404 aaPredicted RBP22.14■■□□□ 1.14
PLD3-211ENST00000485448 ABCC12Q96J65 1359 aa22.14■■□□□ 1.13
PLD3-211ENST00000485448 ATP5J2-PTCD1G3V325 749 aa22.13■■□□□ 1.13
PLD3-211ENST00000485448 NFKBIEO00221 500 aa22.13■■□□□ 1.13
PLD3-211ENST00000485448 BBOX1O75936 387 aa22.13■■□□□ 1.13
PLD3-211ENST00000485448 EXOSC9Q06265 439 aaKnown RBP22.13■■□□□ 1.13
PLD3-211ENST00000485448 DIEXFQ68CQ4 756 aaKnown RBP22.13■■□□□ 1.13
PLD3-211ENST00000485448 DPY19L2Q6NUT2 758 aa22.13■■□□□ 1.13
PLD3-211ENST00000485448 ZBTB38Q8NAP3 1195 aaPredicted RBP22.12■■□□□ 1.13
PLD3-211ENST00000485448 E9PSI1 815 aa22.11■■□□□ 1.13
PLD3-211ENST00000485448 RASSF7Q02833 373 aa22.11■■□□□ 1.13
PLD3-211ENST00000485448 DDX46Q7L014 1031 aaKnown RBP22.11■■□□□ 1.13
PLD3-211ENST00000485448 TMC4Q7Z404 712 aa22.11■■□□□ 1.13
PLD3-211ENST00000485448 ZNF526Q8TF50 670 aaPredicted RBP22.11■■□□□ 1.13
PLD3-211ENST00000485448 ZNF521Q96K83 1311 aa22.11■■□□□ 1.13
PLD3-211ENST00000485448 PI4KAP2A4QPH2 592 aa22.1■■□□□ 1.13
PLD3-211ENST00000485448 FKBP4Q02790 459 aaKnown RBP eCLIP22.1■■□□□ 1.13
PLD3-211ENST00000485448 PI4KAP1Q8N8J0 262 aa22.1■■□□□ 1.13
PLD3-211ENST00000485448 MYD88Q99836 296 aa22.1■■□□□ 1.13
PLD3-211ENST00000485448 CWC25Q9NXE8 425 aaPredicted RBP22.1■■□□□ 1.13
PLD3-211ENST00000485448 MAP3K2Q9Y2U5 619 aa22.1■■□□□ 1.13
PLD3-211ENST00000485448 HCLS1P14317 486 aaPredicted RBP22.09■■□□□ 1.13
PLD3-211ENST00000485448 FAM89AQ96GI7 184 aa22.09■■□□□ 1.13
PLD3-211ENST00000485448 C1QTNF8P60827 252 aa22.08■■□□□ 1.13
PLD3-211ENST00000485448 SF3B3Q15393 1217 aaKnown RBP22.08■■□□□ 1.13
PLD3-211ENST00000485448 PSMD1Q99460 953 aa22.08■■□□□ 1.13
PLD3-211ENST00000485448 GLTPD2A6NH11 291 aa22.07■■□□□ 1.12
PLD3-211ENST00000485448 IRS4O14654 1257 aaPredicted RBP22.07■■□□□ 1.12
PLD3-211ENST00000485448 PPEF1O14829 653 aaPredicted RBP22.07■■□□□ 1.12
PLD3-211ENST00000485448 PCCAP05165 728 aaPredicted RBP22.07■■□□□ 1.12
PLD3-211ENST00000485448 FLIIQ13045 1269 aa22.07■■□□□ 1.12
PLD3-211ENST00000485448 ZNF428Q96B54 188 aa22.07■■□□□ 1.12
PLD3-211ENST00000485448 VPS33BQ9H267 617 aa22.07■■□□□ 1.12
PLD3-211ENST00000485448 SPINK5Q9NQ38 1064 aaPredicted RBP22.07■■□□□ 1.12
PLD3-211ENST00000485448 FKBP5Q13451 457 aaPredicted RBP22.06■■□□□ 1.12
PLD3-211ENST00000485448 COL11A2P13942 1736 aaPredicted RBP22.06■■□□□ 1.12
PLD3-211ENST00000485448 TCERG1O14776 1098 aaKnown RBP22.06■■□□□ 1.12
PLD3-211ENST00000485448 SP8Q8IXZ3 490 aa22.06■■□□□ 1.12
PLD3-211ENST00000485448 ATP6V0A2Q9Y487 856 aa22.06■■□□□ 1.12
PLD3-211ENST00000485448 SLX4Q8IY92 1834 aa22.05■■□□□ 1.12
PLD3-211ENST00000485448 C3orf67Q6ZVT6 689 aa22.05■■□□□ 1.12
PLD3-211ENST00000485448 C16orf71Q8IYS4 520 aaPredicted RBP22.05■■□□□ 1.12
PLD3-211ENST00000485448 SYNE4Q8N205 404 aa22.05■■□□□ 1.12
PLD3-211ENST00000485448 SUPT20HQ8NEM7 779 aa22.05■■□□□ 1.12
PLD3-211ENST00000485448 SLFN5Q08AF3 891 aa22.04■■□□□ 1.12
PLD3-211ENST00000485448 GRAPQ13588 217 aa22.04■■□□□ 1.12
PLD3-211ENST00000485448 GRAPLQ8TC17 118 aaPredicted RBP22.04■■□□□ 1.12
PLD3-211ENST00000485448 DNAAF4Q8WXU2 420 aa22.04■■□□□ 1.12
PLD3-211ENST00000485448 JDP2Q8WYK2 163 aa22.04■■□□□ 1.12
PLD3-211ENST00000485448 ANKRD36CQ5JPF3 1778 aa22.04■■□□□ 1.12
PLD3-211ENST00000485448 PDE8AO60658 829 aa22.03■■□□□ 1.12
PLD3-211ENST00000485448 TOMM70O94826 608 aa22.03■■□□□ 1.12
PLD3-211ENST00000485448 PRELPP51888 382 aa22.03■■□□□ 1.12
PLD3-211ENST00000485448 G2E3Q7L622 706 aa22.03■■□□□ 1.12
PLD3-211ENST00000485448 LINS1Q8NG48 757 aa22.03■■□□□ 1.12
PLD3-211ENST00000485448 ARFGEF2Q9Y6D5 1785 aa22.02■■□□□ 1.12
PLD3-211ENST00000485448 ABCC4O15439 1325 aa22.02■■□□□ 1.12
PLD3-211ENST00000485448 VEGFAP15692 232 aaPredicted RBP22.02■■□□□ 1.12
PLD3-211ENST00000485448 CCDC152Q4G0S7 254 aa22.02■■□□□ 1.12
PLD3-211ENST00000485448 CDHR2Q9BYE9 1310 aa22.01■■□□□ 1.11
PLD3-211ENST00000485448 KIF3CO14782 793 aa22.01■■□□□ 1.11
PLD3-211ENST00000485448 IARSP41252 1262 aaKnown RBP22.01■■□□□ 1.11
PLD3-211ENST00000485448 RTL5Q5HYW3 569 aaPredicted RBP22.01■■□□□ 1.11
PLD3-211ENST00000485448 NEURL1BA8MQ27 555 aa22■■□□□ 1.11
PLD3-211ENST00000485448 IGKV5-2P06315 115 aa22■■□□□ 1.11
PLD3-211ENST00000485448 CT47B1P0C2W7 299 aaPredicted RBP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms