RNA–Protein interactions for RNA: ENST00000485399.5

NECAB3-211, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 1,373 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-211ENST00000485399 ALDH1L1O75891 902 aa27.5■■□□□ 1.99
NECAB3-211ENST00000485399 TCIRG1Q13488 830 aa27.5■■□□□ 1.99
NECAB3-211ENST00000485399 ZNF652Q9Y2D9 606 aa27.5■■□□□ 1.99
NECAB3-211ENST00000485399 HLFQ16534 295 aa27.49■■□□□ 1.99
NECAB3-211ENST00000485399 SCN7AQ01118 1682 aa27.49■■□□□ 1.99
NECAB3-211ENST00000485399 CLEC4GQ6UXB4 293 aa27.48■■□□□ 1.99
NECAB3-211ENST00000485399 ANKRD36CQ5JPF3 1778 aa27.48■■□□□ 1.99
NECAB3-211ENST00000485399 EXOC6Q8TAG9 804 aa27.48■■□□□ 1.99
NECAB3-211ENST00000485399 AFDNP55196 1824 aaKnown RBP27.47■■□□□ 1.99
NECAB3-211ENST00000485399 IGKV5-2P06315 115 aa27.47■■□□□ 1.99
NECAB3-211ENST00000485399 ERICH6BQ5W0A0 696 aa27.47■■□□□ 1.99
NECAB3-211ENST00000485399 USP42Q9H9J4 1324 aaKnown RBP27.46■■□□□ 1.99
NECAB3-211ENST00000485399 IBTKQ9P2D0 1353 aaPredicted RBP27.46■■□□□ 1.99
NECAB3-211ENST00000485399 KIF13BQ9NQT8 1826 aa27.46■■□□□ 1.99
NECAB3-211ENST00000485399 NEURL1BA8MQ27 555 aa27.46■■□□□ 1.99
NECAB3-211ENST00000485399 TRIM28Q13263 835 aaKnown RBP27.46■■□□□ 1.99
NECAB3-211ENST00000485399 CWF19L2Q2TBE0 894 aaKnown RBP27.46■■□□□ 1.99
NECAB3-211ENST00000485399 USPL1Q5W0Q7 1092 aa27.46■■□□□ 1.99
NECAB3-211ENST00000485399 ISCA1Q9BUE6 129 aa27.46■■□□□ 1.99
NECAB3-211ENST00000485399 KIAA1551Q9HCM1 1747 aa27.45■■□□□ 1.98
NECAB3-211ENST00000485399 ATP5J2-PTCD1G3V325 749 aa27.45■■□□□ 1.98
NECAB3-211ENST00000485399 AAMPQ13685 434 aa27.45■■□□□ 1.98
NECAB3-211ENST00000485399 SRP68Q9UHB9 627 aaKnown RBP27.45■■□□□ 1.98
NECAB3-211ENST00000485399 ZBTB7BO15156 539 aaPredicted RBP27.44■■□□□ 1.98
NECAB3-211ENST00000485399 CCDC191Q8NCU4 936 aa27.44■■□□□ 1.98
NECAB3-211ENST00000485399 ZNF34Q8IZ26 560 aa27.43■■□□□ 1.98
NECAB3-211ENST00000485399 GCKRQ14397 625 aa27.42■■□□□ 1.98
NECAB3-211ENST00000485399 BCL2L12Q9HB09 334 aa27.42■■□□□ 1.98
NECAB3-211ENST00000485399 CWC25Q9NXE8 425 aaPredicted RBP27.42■■□□□ 1.98
NECAB3-211ENST00000485399 GNAI3P08754 354 aa27.41■■□□□ 1.98
NECAB3-211ENST00000485399 MMP10P09238 476 aa27.4■■□□□ 1.98
NECAB3-211ENST00000485399 USP44Q9H0E7 712 aa27.4■■□□□ 1.98
NECAB3-211ENST00000485399 C9orf78Q9NZ63 289 aaPredicted RBP27.4■■□□□ 1.98
NECAB3-211ENST00000485399 WWC3Q9ULE0 1092 aa27.4■■□□□ 1.98
NECAB3-211ENST00000485399 GPTP24298 496 aa27.39■■□□□ 1.98
NECAB3-211ENST00000485399 PARP10Q53GL7 1025 aa27.39■■□□□ 1.98
NECAB3-211ENST00000485399 MEIS3Q99687 375 aa27.39■■□□□ 1.98
NECAB3-211ENST00000485399 ZBTB40Q9NUA8 1239 aa27.39■■□□□ 1.98
NECAB3-211ENST00000485399 NLRP10Q86W26 655 aa27.38■■□□□ 1.97
NECAB3-211ENST00000485399 HDAC5Q9UQL6 1122 aa27.38■■□□□ 1.97
NECAB3-211ENST00000485399 NIP7Q9Y221 180 aaKnown RBP eCLIP27.38■■□□□ 1.97
NECAB3-211ENST00000485399 GRM8O00222 908 aa27.37■■□□□ 1.97
NECAB3-211ENST00000485399 GYS1P13807 737 aa27.37■■□□□ 1.97
NECAB3-211ENST00000485399 UTYO14607 1347 aa27.37■■□□□ 1.97
NECAB3-211ENST00000485399 UBTFL1P0CB47 393 aaPredicted RBP27.35■■□□□ 1.97
NECAB3-211ENST00000485399 TBC1D9BQ66K14 1250 aa27.35■■□□□ 1.97
NECAB3-211ENST00000485399 SETDB2Q96T68 719 aa27.35■■□□□ 1.97
NECAB3-211ENST00000485399 GTF3C3Q9Y5Q9 886 aa27.35■■□□□ 1.97
NECAB3-211ENST00000485399 C10orf71Q711Q0 1435 aa27.35■■□□□ 1.97
NECAB3-211ENST00000485399 UBN2Q6ZU65 1347 aa27.35■■□□□ 1.97
NECAB3-211ENST00000485399 PPP1R42Q7Z4L9 355 aa27.35■■□□□ 1.97
NECAB3-211ENST00000485399 H7C1W4 665 aa27.34■■□□□ 1.97
NECAB3-211ENST00000485399 NBPF7P0C2Y1 421 aaPredicted RBP27.34■■□□□ 1.97
NECAB3-211ENST00000485399 NLGN1Q8N2Q7 840 aa27.34■■□□□ 1.97
NECAB3-211ENST00000485399 GNAI2P04899 355 aa27.33■■□□□ 1.97
NECAB3-211ENST00000485399 PCCAP05165 728 aaPredicted RBP27.33■■□□□ 1.97
NECAB3-211ENST00000485399 BICDL1Q6ZP65 573 aa27.33■■□□□ 1.97
NECAB3-211ENST00000485399 ZBTB38Q8NAP3 1195 aaPredicted RBP27.33■■□□□ 1.97
NECAB3-211ENST00000485399 BRCA1P38398 1863 aaKnown RBP27.32■■□□□ 1.96
NECAB3-211ENST00000485399 SUSD4Q5VX71 490 aa27.32■■□□□ 1.96
NECAB3-211ENST00000485399 UTP14AQ9BVJ6 771 aaKnown RBP27.32■■□□□ 1.96
NECAB3-211ENST00000485399 TRMT112Q9UI30 125 aaKnown RBP27.32■■□□□ 1.96
NECAB3-211ENST00000485399 UBE3BQ7Z3V4 1068 aa27.31■■□□□ 1.96
NECAB3-211ENST00000485399 NFIXQ14938 502 aa27.3■■□□□ 1.96
NECAB3-211ENST00000485399 NYXQ9GZU5 481 aa27.3■■□□□ 1.96
NECAB3-211ENST00000485399 GPBP1L1Q9HC44 474 aaPredicted RBP27.3■■□□□ 1.96
NECAB3-211ENST00000485399 TM4SF1P30408 202 aa27.29■■□□□ 1.96
NECAB3-211ENST00000485399 CASP7P55210 303 aa27.29■■□□□ 1.96
NECAB3-211ENST00000485399 TGFB2P61812 414 aa27.29■■□□□ 1.96
NECAB3-211ENST00000485399 CARMIL3Q8ND23 1372 aa27.28■■□□□ 1.96
NECAB3-211ENST00000485399 C1orf115Q9H7X2 142 aa27.28■■□□□ 1.96
NECAB3-211ENST00000485399 PPP4R2Q9NY27 417 aa27.28■■□□□ 1.96
NECAB3-211ENST00000485399 LRRFIP2Q9Y608 721 aaKnown RBP27.28■■□□□ 1.96
NECAB3-211ENST00000485399 CDHR2Q9BYE9 1310 aa27.28■■□□□ 1.96
NECAB3-211ENST00000485399 FAM177BA6PVY3 158 aa27.27■■□□□ 1.96
NECAB3-211ENST00000485399 NTSR2O95665 410 aa27.27■■□□□ 1.96
NECAB3-211ENST00000485399 JARID2Q92833 1246 aaPredicted RBP27.27■■□□□ 1.96
NECAB3-211ENST00000485399 FAM89AQ96GI7 184 aa27.27■■□□□ 1.96
NECAB3-211ENST00000485399 SH3TC1Q8TE82 1336 aa27.27■■□□□ 1.96
NECAB3-211ENST00000485399 RTL5Q5HYW3 569 aaPredicted RBP27.26■■□□□ 1.95
NECAB3-211ENST00000485399 NBPF5PQ86XG9 351 aaPredicted RBP27.26■■□□□ 1.95
NECAB3-211ENST00000485399 ZNF526Q8TF50 670 aaPredicted RBP27.26■■□□□ 1.95
NECAB3-211ENST00000485399 SUCLG2Q96I99 432 aa27.26■■□□□ 1.95
NECAB3-211ENST00000485399 A0A0G2JLW4 131 aa27.25■■□□□ 1.95
NECAB3-211ENST00000485399 HSP90B1P14625 803 aaKnown RBP27.25■■□□□ 1.95
NECAB3-211ENST00000485399 TPTE2Q6XPS3 522 aa27.25■■□□□ 1.95
NECAB3-211ENST00000485399 RPAP2Q8IXW5 612 aaPredicted RBP27.24■■□□□ 1.95
NECAB3-211ENST00000485399 PCDHB15Q9Y5E8 787 aa27.24■■□□□ 1.95
NECAB3-211ENST00000485399 GTF2E1P29083 439 aaPredicted RBP27.23■■□□□ 1.95
NECAB3-211ENST00000485399 IRS4O14654 1257 aaPredicted RBP27.22■■□□□ 1.95
NECAB3-211ENST00000485399 PLA2G12BQ9BX93 195 aa27.22■■□□□ 1.95
NECAB3-211ENST00000485399 PARP3Q9Y6F1 533 aa27.22■■□□□ 1.95
NECAB3-211ENST00000485399 DPEP1P16444 411 aa27.22■■□□□ 1.95
NECAB3-211ENST00000485399 CEP85Q6P2H3 762 aa27.22■■□□□ 1.95
NECAB3-211ENST00000485399 ANKRD44Q8N8A2 993 aa27.22■■□□□ 1.95
NECAB3-211ENST00000485399 KAZALD1Q96I82 304 aa27.22■■□□□ 1.95
NECAB3-211ENST00000485399 BCS1LQ9Y276 419 aa27.22■■□□□ 1.95
NECAB3-211ENST00000485399 ARFGEF1Q9Y6D6 1849 aa27.21■■□□□ 1.95
NECAB3-211ENST00000485399 POLRMTO00411 1230 aaKnown RBP27.21■■□□□ 1.95
NECAB3-211ENST00000485399 SERPINB2P05120 415 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms