RNA–Protein interactions for RNA: ENST00000485272.5

RIPPLY3-202, Transcript of ripply transcriptional repressor 3, humanhuman

TSL 1 (best)

Gene RIPPLY3, Length 2,005 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-202ENST00000485272 HSP90AA1P07900 732 aaKnown RBP15.09■□□□□ 0.01
RIPPLY3-202ENST00000485272 NEXNQ0ZGT2 675 aa15.09■□□□□ 0.01
RIPPLY3-202ENST00000485272 AKT1S1Q96B36 256 aa15.09■□□□□ 0.01
RIPPLY3-202ENST00000485272 USP44Q9H0E7 712 aa15.09■□□□□ 0.01
RIPPLY3-202ENST00000485272 RWDD1Q9H446 243 aaPredicted RBP15.09■□□□□ 0.01
RIPPLY3-202ENST00000485272 ZBTB40Q9NUA8 1239 aa15.09■□□□□ 0.01
RIPPLY3-202ENST00000485272 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.08■□□□□ 0
RIPPLY3-202ENST00000485272 NEURL1BA8MQ27 555 aa15.08■□□□□ 0
RIPPLY3-202ENST00000485272 SRP68Q9UHB9 627 aaKnown RBP15.08■□□□□ 0
RIPPLY3-202ENST00000485272 ERVV-1B6SEH8 477 aa15.07■□□□□ 0
RIPPLY3-202ENST00000485272 TCIRG1Q13488 830 aa15.07■□□□□ 0
RIPPLY3-202ENST00000485272 TRAPPC3LQ5T215 181 aa15.07■□□□□ 0
RIPPLY3-202ENST00000485272 CCDC125Q86Z20 511 aa15.07■□□□□ 0
RIPPLY3-202ENST00000485272 C1orf115Q9H7X2 142 aa15.07■□□□□ 0
RIPPLY3-202ENST00000485272 NBPF7P0C2Y1 421 aaPredicted RBP15.07■□□□□ 0
RIPPLY3-202ENST00000485272 GPTP24298 496 aa15.07■□□□□ 0
RIPPLY3-202ENST00000485272 USPL1Q5W0Q7 1092 aa15.07■□□□□ 0
RIPPLY3-202ENST00000485272 TFCP2L1Q9NZI6 479 aa15.07■□□□□ 0
RIPPLY3-202ENST00000485272 A0A087WZG4 1122 aa15.06■□□□□ 0
RIPPLY3-202ENST00000485272 ALDH1L1O75891 902 aa15.06■□□□□ 0
RIPPLY3-202ENST00000485272 CLCN1P35523 988 aa15.06■□□□□ 0
RIPPLY3-202ENST00000485272 GCKRQ14397 625 aa15.06■□□□□ 0
RIPPLY3-202ENST00000485272 L1TD1Q5T7N2 865 aaKnown RBP15.06■□□□□ 0
RIPPLY3-202ENST00000485272 JARID2Q92833 1246 aaPredicted RBP15.06■□□□□ 0
RIPPLY3-202ENST00000485272 BCL2L12Q9HB09 334 aa15.06■□□□□ 0
RIPPLY3-202ENST00000485272 NARFQ9UHQ1 456 aa15.06■□□□□ 0
RIPPLY3-202ENST00000485272 SCN7AQ01118 1682 aa15.06■□□□□ 0
RIPPLY3-202ENST00000485272 RFC4P35249 363 aa15.05■□□□□ 0
RIPPLY3-202ENST00000485272 ISCA1Q9BUE6 129 aa15.05■□□□□ 0
RIPPLY3-202ENST00000485272 PCDHB15Q9Y5E8 787 aa15.05■□□□□ 0
RIPPLY3-202ENST00000485272 IGHDP01880 384 aa15.05■□□□□ -0
RIPPLY3-202ENST00000485272 SKAP1Q86WV1 359 aa15.05■□□□□ -0
RIPPLY3-202ENST00000485272 ZPR1O75312 459 aa15.04■□□□□ -0
RIPPLY3-202ENST00000485272 SSFA2P28290 1259 aa15.04■□□□□ -0
RIPPLY3-202ENST00000485272 SLC4A3P48751 1232 aa15.04■□□□□ -0
RIPPLY3-202ENST00000485272 C9orf78Q9NZ63 289 aaPredicted RBP15.04■□□□□ -0
RIPPLY3-202ENST00000485272 RGS3P49796 1198 aa15.04■□□□□ -0
RIPPLY3-202ENST00000485272 CHMP4BQ9H444 224 aaKnown RBP15.04■□□□□ -0
RIPPLY3-202ENST00000485272 UBN2Q6ZU65 1347 aa15.03■□□□□ -0
RIPPLY3-202ENST00000485272 USP42Q9H9J4 1324 aaKnown RBP15.03■□□□□ -0
RIPPLY3-202ENST00000485272 GRM8O00222 908 aa15.03■□□□□ -0
RIPPLY3-202ENST00000485272 ADRA2BP18089 450 aa15.03■□□□□ -0
RIPPLY3-202ENST00000485272 HMGB2P26583 209 aaKnown RBP15.03■□□□□ -0
RIPPLY3-202ENST00000485272 COL23A1Q86Y22 540 aaPredicted RBP15.03■□□□□ -0
RIPPLY3-202ENST00000485272 ZNF34Q8IZ26 560 aa15.03■□□□□ -0
RIPPLY3-202ENST00000485272 CCDC191Q8NCU4 936 aa15.03■□□□□ -0
RIPPLY3-202ENST00000485272 NAP1L5Q96NT1 182 aaPredicted RBP15.03■□□□□ -0
RIPPLY3-202ENST00000485272 CWC25Q9NXE8 425 aaPredicted RBP15.03■□□□□ -0
RIPPLY3-202ENST00000485272 UBTFL1P0CB47 393 aaPredicted RBP15.02■□□□□ -0
RIPPLY3-202ENST00000485272 TRIM28Q13263 835 aaKnown RBP15.02■□□□□ -0
RIPPLY3-202ENST00000485272 SLC15A2Q16348 729 aa15.02■□□□□ -0
RIPPLY3-202ENST00000485272 HSP90AB3PQ58FF7 597 aa15.02■□□□□ -0
RIPPLY3-202ENST00000485272 TBC1D9BQ66K14 1250 aa15.02■□□□□ -0
RIPPLY3-202ENST00000485272 CLEC4GQ6UXB4 293 aa15.02■□□□□ -0
RIPPLY3-202ENST00000485272 NLRP10Q86W26 655 aa15.02■□□□□ -0
RIPPLY3-202ENST00000485272 PNPLA7Q6ZV29 1317 aa15.02□□□□□ -0.01
RIPPLY3-202ENST00000485272 GNAI3P08754 354 aa15.02□□□□□ -0.01
RIPPLY3-202ENST00000485272 BICDL1Q6ZP65 573 aa15.02□□□□□ -0.01
RIPPLY3-202ENST00000485272 UBE3BQ7Z3V4 1068 aa15.02□□□□□ -0.01
RIPPLY3-202ENST00000485272 NIP7Q9Y221 180 aaKnown RBP eCLIP15.02□□□□□ -0.01
RIPPLY3-202ENST00000485272 FAM177BA6PVY3 158 aa15.01□□□□□ -0.01
RIPPLY3-202ENST00000485272 SYNE4Q8N205 404 aa15.01□□□□□ -0.01
RIPPLY3-202ENST00000485272 ZNF652Q9Y2D9 606 aa15.01□□□□□ -0.01
RIPPLY3-202ENST00000485272 LRRFIP2Q9Y608 721 aaKnown RBP15.01□□□□□ -0.01
RIPPLY3-202ENST00000485272 UTYO14607 1347 aa15.01□□□□□ -0.01
RIPPLY3-202ENST00000485272 GYS1P13807 737 aa15□□□□□ -0.01
RIPPLY3-202ENST00000485272 SUSD4Q5VX71 490 aa15□□□□□ -0.01
RIPPLY3-202ENST00000485272 FAM89AQ96GI7 184 aa15□□□□□ -0.01
RIPPLY3-202ENST00000485272 KAZALD1Q96I82 304 aa15□□□□□ -0.01
RIPPLY3-202ENST00000485272 QSER1Q2KHR3 1735 aa15□□□□□ -0.01
RIPPLY3-202ENST00000485272 H7C1W4 665 aa15□□□□□ -0.01
RIPPLY3-202ENST00000485272 GNAI2P04899 355 aa15□□□□□ -0.01
RIPPLY3-202ENST00000485272 CASP7P55210 303 aa15□□□□□ -0.01
RIPPLY3-202ENST00000485272 SIRT2Q8IXJ6 389 aa15□□□□□ -0.01
RIPPLY3-202ENST00000485272 UPF2Q9HAU5 1272 aaKnown RBP15□□□□□ -0.01
RIPPLY3-202ENST00000485272 STK32BQ9NY57 414 aa15□□□□□ -0.01
RIPPLY3-202ENST00000485272 HDAC1Q13547 482 aaPredicted RBP14.99□□□□□ -0.01
RIPPLY3-202ENST00000485272 SUCLG2Q96I99 432 aa14.99□□□□□ -0.01
RIPPLY3-202ENST00000485272 PDGFDQ9GZP0 370 aaPredicted RBP14.99□□□□□ -0.01
RIPPLY3-202ENST00000485272 MYH3P11055 1940 aa14.99□□□□□ -0.01
RIPPLY3-202ENST00000485272 IBTKQ9P2D0 1353 aaPredicted RBP14.98□□□□□ -0.01
RIPPLY3-202ENST00000485272 BECN1Q14457 450 aa14.98□□□□□ -0.01
RIPPLY3-202ENST00000485272 EPHA10Q5JZY3 1008 aa14.98□□□□□ -0.01
RIPPLY3-202ENST00000485272 CEP85Q6P2H3 762 aa14.98□□□□□ -0.01
RIPPLY3-202ENST00000485272 TRMT112Q9UI30 125 aaKnown RBP14.98□□□□□ -0.01
RIPPLY3-202ENST00000485272 RGL2O15211 777 aa14.97□□□□□ -0.01
RIPPLY3-202ENST00000485272 ZBTB38Q8NAP3 1195 aaPredicted RBP14.97□□□□□ -0.01
RIPPLY3-202ENST00000485272 FLAD1Q8NFF5 587 aa14.97□□□□□ -0.01
RIPPLY3-202ENST00000485272 CASZ1Q86V15 1759 aa14.97□□□□□ -0.01
RIPPLY3-202ENST00000485272 COL24A1Q17RW2 1714 aa14.97□□□□□ -0.01
RIPPLY3-202ENST00000485272 PCCAP05165 728 aaPredicted RBP14.97□□□□□ -0.01
RIPPLY3-202ENST00000485272 NFIXQ14938 502 aa14.97□□□□□ -0.01
RIPPLY3-202ENST00000485272 PARP10Q53GL7 1025 aa14.97□□□□□ -0.01
RIPPLY3-202ENST00000485272 SETDB2Q96T68 719 aa14.97□□□□□ -0.01
RIPPLY3-202ENST00000485272 BICC1Q9H694 974 aaKnown RBP14.97□□□□□ -0.01
RIPPLY3-202ENST00000485272 DDX60Q8IY21 1712 aaKnown RBP14.96□□□□□ -0.01
RIPPLY3-202ENST00000485272 PNMA6EA0A0J9YXQ4 647 aa14.96□□□□□ -0.01
RIPPLY3-202ENST00000485272 NTSR2O95665 410 aa14.96□□□□□ -0.01
RIPPLY3-202ENST00000485272 NUTM1Q86Y26 1132 aa14.96□□□□□ -0.01
RIPPLY3-202ENST00000485272 ANKRD44Q8N8A2 993 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms