RNA–Protein interactions for RNA: ENST00000485091.5

CCDC78-214, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,734 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-214ENST00000485091 ZNF34Q8IZ26 560 aa21.82■■□□□ 1.08
CCDC78-214ENST00000485091 HDAC5Q9UQL6 1122 aa21.82■■□□□ 1.08
CCDC78-214ENST00000485091 NIP7Q9Y221 180 aaKnown RBP eCLIP21.82■■□□□ 1.08
CCDC78-214ENST00000485091 UBN2Q6ZU65 1347 aa21.81■■□□□ 1.08
CCDC78-214ENST00000485091 ZNF827Q17R98 1081 aa21.81■■□□□ 1.08
CCDC78-214ENST00000485091 BICDL1Q6ZP65 573 aa21.81■■□□□ 1.08
CCDC78-214ENST00000485091 SKAP1Q86WV1 359 aa21.81■■□□□ 1.08
CCDC78-214ENST00000485091 FAM89AQ96GI7 184 aa21.81■■□□□ 1.08
CCDC78-214ENST00000485091 KAZALD1Q96I82 304 aa21.81■■□□□ 1.08
CCDC78-214ENST00000485091 CAMKK2Q96RR4 588 aa21.81■■□□□ 1.08
CCDC78-214ENST00000485091 BICC1Q9H694 974 aaKnown RBP21.81■■□□□ 1.08
CCDC78-214ENST00000485091 ANKRD36CQ5JPF3 1778 aa21.81■■□□□ 1.08
CCDC78-214ENST00000485091 HMMRO75330 724 aa21.8■■□□□ 1.08
CCDC78-214ENST00000485091 HMGB2P26583 209 aaKnown RBP21.8■■□□□ 1.08
CCDC78-214ENST00000485091 PPP1R42Q7Z4L9 355 aa21.8■■□□□ 1.08
CCDC78-214ENST00000485091 BCL2L12Q9HB09 334 aa21.8■■□□□ 1.08
CCDC78-214ENST00000485091 TFCP2L1Q9NZI6 479 aa21.8■■□□□ 1.08
CCDC78-214ENST00000485091 IBTKQ9P2D0 1353 aaPredicted RBP21.8■■□□□ 1.08
CCDC78-214ENST00000485091 CASP7P55210 303 aa21.8■■□□□ 1.08
CCDC78-214ENST00000485091 EPHA10Q5JZY3 1008 aa21.8■■□□□ 1.08
CCDC78-214ENST00000485091 BCORQ6W2J9 1755 aa21.79■■□□□ 1.08
CCDC78-214ENST00000485091 SRGAP3O43295 1099 aa21.79■■□□□ 1.08
CCDC78-214ENST00000485091 SUSD4Q5VX71 490 aa21.79■■□□□ 1.08
CCDC78-214ENST00000485091 CLEC4GQ6UXB4 293 aa21.79■■□□□ 1.08
CCDC78-214ENST00000485091 AKT1S1Q96B36 256 aa21.79■■□□□ 1.08
CCDC78-214ENST00000485091 TRMT112Q9UI30 125 aaKnown RBP21.79■■□□□ 1.08
CCDC78-214ENST00000485091 UBR3Q6ZT12 1888 aa21.78■■□□□ 1.08
CCDC78-214ENST00000485091 ADRA2BP18089 450 aa21.78■■□□□ 1.08
CCDC78-214ENST00000485091 SSFA2P28290 1259 aa21.78■■□□□ 1.08
CCDC78-214ENST00000485091 TBC1D9BQ66K14 1250 aa21.78■■□□□ 1.08
CCDC78-214ENST00000485091 SYNE4Q8N205 404 aa21.78■■□□□ 1.08
CCDC78-214ENST00000485091 PCCAP05165 728 aaPredicted RBP21.77■■□□□ 1.08
CCDC78-214ENST00000485091 ZBTB38Q8NAP3 1195 aaPredicted RBP21.77■■□□□ 1.08
CCDC78-214ENST00000485091 USP42Q9H9J4 1324 aaKnown RBP21.77■■□□□ 1.08
CCDC78-214ENST00000485091 C4AP0C0L4 1744 aa21.77■■□□□ 1.08
CCDC78-214ENST00000485091 RGPD3A6NKT7 1758 aaPredicted RBP21.77■■□□□ 1.08
CCDC78-214ENST00000485091 RGPD4Q7Z3J3 1758 aa21.77■■□□□ 1.08
CCDC78-214ENST00000485091 SCN7AQ01118 1682 aa21.77■■□□□ 1.08
CCDC78-214ENST00000485091 MSH5O43196 834 aa21.77■■□□□ 1.08
CCDC78-214ENST00000485091 PARP10Q53GL7 1025 aa21.76■■□□□ 1.07
CCDC78-214ENST00000485091 SMC5Q8IY18 1101 aa21.76■■□□□ 1.07
CCDC78-214ENST00000485091 BCL11AQ9H165 835 aa21.76■■□□□ 1.07
CCDC78-214ENST00000485091 PDZRN3Q9UPQ7 1066 aa21.76■■□□□ 1.07
CCDC78-214ENST00000485091 APBB1O00213 710 aa21.75■■□□□ 1.07
CCDC78-214ENST00000485091 GCC1Q96CN9 775 aa21.75■■□□□ 1.07
CCDC78-214ENST00000485091 UTP14AQ9BVJ6 771 aaKnown RBP21.75■■□□□ 1.07
CCDC78-214ENST00000485091 SSH3Q8TE77 659 aa21.75■■□□□ 1.07
CCDC78-214ENST00000485091 DCTPP1Q9H773 170 aa21.75■■□□□ 1.07
CCDC78-214ENST00000485091 CHMP3Q9Y3E7 222 aa21.75■■□□□ 1.07
CCDC78-214ENST00000485091 FOXO4P98177 505 aa21.74■■□□□ 1.07
CCDC78-214ENST00000485091 ANKRD45Q5TZF3 282 aa21.74■■□□□ 1.07
CCDC78-214ENST00000485091 LMBR1LQ6UX01 489 aa21.74■■□□□ 1.07
CCDC78-214ENST00000485091 EXOC6BQ9Y2D4 811 aa21.74■■□□□ 1.07
CCDC78-214ENST00000485091 MTX1Q13505 466 aa21.73■■□□□ 1.07
CCDC78-214ENST00000485091 POLA2Q14181 598 aa21.73■■□□□ 1.07
CCDC78-214ENST00000485091 NUTM1Q86Y26 1132 aa21.73■■□□□ 1.07
CCDC78-214ENST00000485091 SETDB2Q96T68 719 aa21.73■■□□□ 1.07
CCDC78-214ENST00000485091 IRS4O14654 1257 aaPredicted RBP21.72■■□□□ 1.07
CCDC78-214ENST00000485091 COL23A1Q86Y22 540 aaPredicted RBP21.72■■□□□ 1.07
CCDC78-214ENST00000485091 ANO8Q9HCE9 1232 aaPredicted RBP21.72■■□□□ 1.07
CCDC78-214ENST00000485091 RGL2O15211 777 aa21.72■■□□□ 1.07
CCDC78-214ENST00000485091 NTSR2O95665 410 aa21.72■■□□□ 1.07
CCDC78-214ENST00000485091 GYS1P13807 737 aa21.72■■□□□ 1.07
CCDC78-214ENST00000485091 CCDC85AQ96PX6 553 aaPredicted RBP21.72■■□□□ 1.07
CCDC78-214ENST00000485091 SH3TC1Q8TE82 1336 aa21.71■■□□□ 1.07
CCDC78-214ENST00000485091 CDHR2Q9BYE9 1310 aa21.71■■□□□ 1.07
CCDC78-214ENST00000485091 SURF6O75683 361 aaKnown RBP21.71■■□□□ 1.07
CCDC78-214ENST00000485091 RGS3P49796 1198 aa21.71■■□□□ 1.07
CCDC78-214ENST00000485091 RABL6Q3YEC7 729 aaPredicted RBP21.71■■□□□ 1.07
CCDC78-214ENST00000485091 STK32BQ9NY57 414 aa21.71■■□□□ 1.07
CCDC78-214ENST00000485091 PA2G4Q9UQ80 394 aaKnown RBP21.71■■□□□ 1.07
CCDC78-214ENST00000485091 HCLS1P14317 486 aaPredicted RBP21.7■■□□□ 1.06
CCDC78-214ENST00000485091 SLC15A2Q16348 729 aa21.7■■□□□ 1.06
CCDC78-214ENST00000485091 LNPKQ9C0E8 428 aa21.7■■□□□ 1.06
CCDC78-214ENST00000485091 GTF2E1P29083 439 aaPredicted RBP21.69■■□□□ 1.06
CCDC78-214ENST00000485091 KLHDC4Q8TBB5 520 aa21.69■■□□□ 1.06
CCDC78-214ENST00000485091 TUBGCP6Q96RT7 1819 aa21.69■■□□□ 1.06
CCDC78-214ENST00000485091 NUCB1Q02818 461 aa21.69■■□□□ 1.06
CCDC78-214ENST00000485091 PNPLA7Q6ZV29 1317 aa21.69■■□□□ 1.06
CCDC78-214ENST00000485091 SMARCA5O60264 1052 aaPredicted RBP21.68■■□□□ 1.06
CCDC78-214ENST00000485091 PDE8AO60658 829 aa21.68■■□□□ 1.06
CCDC78-214ENST00000485091 NFIXQ14938 502 aa21.68■■□□□ 1.06
CCDC78-214ENST00000485091 ERFEQ4G0M1 354 aa21.68■■□□□ 1.06
CCDC78-214ENST00000485091 CHD1LQ86WJ1 897 aa21.68■■□□□ 1.06
CCDC78-214ENST00000485091 NBPF5PQ86XG9 351 aaPredicted RBP21.68■■□□□ 1.06
CCDC78-214ENST00000485091 FLAD1Q8NFF5 587 aa21.68■■□□□ 1.06
CCDC78-214ENST00000485091 PLA2G12BQ9BX93 195 aa21.68■■□□□ 1.06
CCDC78-214ENST00000485091 ZBTB47Q9UFB7 747 aaPredicted RBP21.68■■□□□ 1.06
CCDC78-214ENST00000485091 OS9Q13438 667 aaPredicted RBP21.67■■□□□ 1.06
CCDC78-214ENST00000485091 CCDC24Q8N4L8 307 aa21.67■■□□□ 1.06
CCDC78-214ENST00000485091 SIL1Q9H173 461 aa21.67■■□□□ 1.06
CCDC78-214ENST00000485091 NPHP1O15259 732 aa21.66■■□□□ 1.06
CCDC78-214ENST00000485091 CTSWP56202 376 aa21.66■■□□□ 1.06
CCDC78-214ENST00000485091 NYXQ9GZU5 481 aa21.66■■□□□ 1.06
CCDC78-214ENST00000485091 RFX5P48382 616 aaPredicted RBP21.65■■□□□ 1.06
CCDC78-214ENST00000485091 CSF1RP07333 972 aa21.64■■□□□ 1.06
CCDC78-214ENST00000485091 PDE4AP27815 886 aa21.64■■□□□ 1.06
CCDC78-214ENST00000485091 FAM161AQ3B820 660 aa21.64■■□□□ 1.06
CCDC78-214ENST00000485091 TPTE2Q6XPS3 522 aa21.64■■□□□ 1.06
CCDC78-214ENST00000485091 TTLL11Q8NHH1 800 aa21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms