RNA–Protein interactions for RNA: ENST00000484968.1

NEB-213, Transcript of nebulin, humanhuman

TSL 4

Gene NEB, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-213ENST00000484968 UTYO14607 1347 aa11.86□□□□□ -0.51
NEB-213ENST00000484968 FAM177BA6PVY3 158 aa11.85□□□□□ -0.51
NEB-213ENST00000484968 POLRMTO00411 1230 aaKnown RBP11.85□□□□□ -0.51
NEB-213ENST00000484968 ALDH1L1O75891 902 aa11.85□□□□□ -0.51
NEB-213ENST00000484968 NTSR2O95665 410 aa11.85□□□□□ -0.51
NEB-213ENST00000484968 HMGB2P26583 209 aaKnown RBP11.85□□□□□ -0.51
NEB-213ENST00000484968 RTL5Q5HYW3 569 aaPredicted RBP11.85□□□□□ -0.51
NEB-213ENST00000484968 EPHA10Q5JZY3 1008 aa11.85□□□□□ -0.51
NEB-213ENST00000484968 NPM2Q86SE8 214 aaKnown RBP11.85□□□□□ -0.51
NEB-213ENST00000484968 CCDC24Q8N4L8 307 aa11.85□□□□□ -0.51
NEB-213ENST00000484968 CCDC191Q8NCU4 936 aa11.85□□□□□ -0.51
NEB-213ENST00000484968 FAM89AQ96GI7 184 aa11.85□□□□□ -0.51
NEB-213ENST00000484968 N4BP2Q86UW6 1770 aaPredicted RBP11.84□□□□□ -0.51
NEB-213ENST00000484968 IBTKQ9P2D0 1353 aaPredicted RBP11.84□□□□□ -0.51
NEB-213ENST00000484968 ZBTB7AO95365 584 aa11.84□□□□□ -0.51
NEB-213ENST00000484968 C3orf67Q6ZVT6 689 aa11.84□□□□□ -0.51
NEB-213ENST00000484968 NUTM1Q86Y26 1132 aa11.84□□□□□ -0.51
NEB-213ENST00000484968 C1orf115Q9H7X2 142 aa11.84□□□□□ -0.51
NEB-213ENST00000484968 CWC25Q9NXE8 425 aaPredicted RBP11.84□□□□□ -0.51
NEB-213ENST00000484968 ANKRD36CQ5JPF3 1778 aa11.84□□□□□ -0.51
NEB-213ENST00000484968 ABCC12Q96J65 1359 aa11.83□□□□□ -0.52
NEB-213ENST00000484968 GRM8O00222 908 aa11.83□□□□□ -0.52
NEB-213ENST00000484968 MS4A1P11836 297 aa11.83□□□□□ -0.52
NEB-213ENST00000484968 NEXNQ0ZGT2 675 aa11.83□□□□□ -0.52
NEB-213ENST00000484968 ERFEQ4G0M1 354 aa11.83□□□□□ -0.52
NEB-213ENST00000484968 HSP90AB3PQ58FF7 597 aa11.83□□□□□ -0.52
NEB-213ENST00000484968 UBE3BQ7Z3V4 1068 aa11.83□□□□□ -0.52
NEB-213ENST00000484968 NLGN1Q8N2Q7 840 aa11.83□□□□□ -0.52
NEB-213ENST00000484968 SUCLG2Q96I99 432 aa11.83□□□□□ -0.52
NEB-213ENST00000484968 SGIP1Q9BQI5 828 aa11.83□□□□□ -0.52
NEB-213ENST00000484968 ZNF652Q9Y2D9 606 aa11.83□□□□□ -0.52
NEB-213ENST00000484968 PCDHB15Q9Y5E8 787 aa11.83□□□□□ -0.52
NEB-213ENST00000484968 COL24A1Q17RW2 1714 aa11.83□□□□□ -0.52
NEB-213ENST00000484968 CARMIL3Q8ND23 1372 aa11.82□□□□□ -0.52
NEB-213ENST00000484968 PCCAP05165 728 aaPredicted RBP11.82□□□□□ -0.52
NEB-213ENST00000484968 MMP10P09238 476 aa11.82□□□□□ -0.52
NEB-213ENST00000484968 FOXO4P98177 505 aa11.82□□□□□ -0.52
NEB-213ENST00000484968 SIRT2Q8IXJ6 389 aa11.82□□□□□ -0.52
NEB-213ENST00000484968 ZBTB38Q8NAP3 1195 aaPredicted RBP11.82□□□□□ -0.52
NEB-213ENST00000484968 SETDB2Q96T68 719 aa11.82□□□□□ -0.52
NEB-213ENST00000484968 TRMT112Q9UI30 125 aaKnown RBP11.82□□□□□ -0.52
NEB-213ENST00000484968 ATF5Q9Y2D1 282 aaPredicted RBP11.82□□□□□ -0.52
NEB-213ENST00000484968 SERPINB2P05120 415 aa11.81□□□□□ -0.52
NEB-213ENST00000484968 HCLS1P14317 486 aaPredicted RBP11.81□□□□□ -0.52
NEB-213ENST00000484968 PTGER2P43116 358 aa11.81□□□□□ -0.52
NEB-213ENST00000484968 PARP10Q53GL7 1025 aa11.81□□□□□ -0.52
NEB-213ENST00000484968 PRR5LQ6MZQ0 368 aa11.81□□□□□ -0.52
NEB-213ENST00000484968 ANKRD44Q8N8A2 993 aa11.81□□□□□ -0.52
NEB-213ENST00000484968 UTP14AQ9BVJ6 771 aaKnown RBP11.81□□□□□ -0.52
NEB-213ENST00000484968 DDX19BQ9UMR2 479 aa11.81□□□□□ -0.52
NEB-213ENST00000484968 LRRFIP2Q9Y608 721 aaKnown RBP11.81□□□□□ -0.52
NEB-213ENST00000484968 SLC10A5Q5PT55 438 aa11.8□□□□□ -0.52
NEB-213ENST00000484968 SLC16A10Q8TF71 515 aa11.8□□□□□ -0.52
NEB-213ENST00000484968 C9orf78Q9NZ63 289 aaPredicted RBP11.8□□□□□ -0.52
NEB-213ENST00000484968 COL4A1P02462 1669 aa11.8□□□□□ -0.52
NEB-213ENST00000484968 AFDNP55196 1824 aaKnown RBP11.79□□□□□ -0.52
NEB-213ENST00000484968 IRS4O14654 1257 aaPredicted RBP11.79□□□□□ -0.52
NEB-213ENST00000484968 NBPF5PQ86XG9 351 aaPredicted RBP11.79□□□□□ -0.52
NEB-213ENST00000484968 BICC1Q9H694 974 aaKnown RBP11.79□□□□□ -0.52
NEB-213ENST00000484968 SRCAPQ6ZRS2 3230 aa11.79□□□□□ -0.52
NEB-213ENST00000484968 NRXN2Q9P2S2 1712 aa11.79□□□□□ -0.52
NEB-213ENST00000484968 SH3TC1Q8TE82 1336 aa11.79□□□□□ -0.52
NEB-213ENST00000484968 CDHR2Q9BYE9 1310 aa11.79□□□□□ -0.52
NEB-213ENST00000484968 TNRC6CQ9HCJ0 1690 aaKnown RBP11.78□□□□□ -0.52
NEB-213ENST00000484968 PNMA6EA0A0J9YXQ4 647 aa11.78□□□□□ -0.52
NEB-213ENST00000484968 UBTFL1P0CB47 393 aaPredicted RBP11.78□□□□□ -0.52
NEB-213ENST00000484968 RABL6Q3YEC7 729 aaPredicted RBP11.78□□□□□ -0.52
NEB-213ENST00000484968 CEP85Q6P2H3 762 aa11.78□□□□□ -0.52
NEB-213ENST00000484968 PPP1R42Q7Z4L9 355 aa11.78□□□□□ -0.52
NEB-213ENST00000484968 SLC51AQ86UW1 340 aa11.78□□□□□ -0.52
NEB-213ENST00000484968 PLA2G12BQ9BX93 195 aa11.78□□□□□ -0.52
NEB-213ENST00000484968 MTFR1LQ9H019 292 aa11.78□□□□□ -0.52
NEB-213ENST00000484968 DDX60Q8IY21 1712 aaKnown RBP11.77□□□□□ -0.52
NEB-213ENST00000484968 GNAI2P04899 355 aa11.77□□□□□ -0.53
NEB-213ENST00000484968 CSF1RP07333 972 aa11.77□□□□□ -0.53
NEB-213ENST00000484968 GNAI3P08754 354 aa11.77□□□□□ -0.53
NEB-213ENST00000484968 TPTE2Q6XPS3 522 aa11.77□□□□□ -0.53
NEB-213ENST00000484968 TTLL11Q8NHH1 800 aa11.77□□□□□ -0.53
NEB-213ENST00000484968 CCDC85AQ96PX6 553 aaPredicted RBP11.77□□□□□ -0.53
NEB-213ENST00000484968 KLRG2A4D1S0 409 aaPredicted RBP11.76□□□□□ -0.53
NEB-213ENST00000484968 IGHDP01880 384 aa11.76□□□□□ -0.53
NEB-213ENST00000484968 RFX5P48382 616 aaPredicted RBP11.76□□□□□ -0.53
NEB-213ENST00000484968 LMBR1LQ6UX01 489 aa11.76□□□□□ -0.53
NEB-213ENST00000484968 CNBD1Q8NA66 436 aa11.76□□□□□ -0.53
NEB-213ENST00000484968 PDE8AO60658 829 aa11.75□□□□□ -0.53
NEB-213ENST00000484968 ATP8B2P98198 1209 aa11.75□□□□□ -0.53
NEB-213ENST00000484968 MTX1Q13505 466 aa11.75□□□□□ -0.53
NEB-213ENST00000484968 POLA2Q14181 598 aa11.75□□□□□ -0.53
NEB-213ENST00000484968 KLHDC4Q8TBB5 520 aa11.75□□□□□ -0.53
NEB-213ENST00000484968 NYXQ9GZU5 481 aa11.75□□□□□ -0.53
NEB-213ENST00000484968 GREM2Q9H772 168 aa11.75□□□□□ -0.53
NEB-213ENST00000484968 PARP3Q9Y6F1 533 aa11.75□□□□□ -0.53
NEB-213ENST00000484968 ANKRD31Q8N7Z5 1873 aa11.74□□□□□ -0.53
NEB-213ENST00000484968 CTSWP56202 376 aa11.74□□□□□ -0.53
NEB-213ENST00000484968 SF3B3Q15393 1217 aaKnown RBP11.74□□□□□ -0.53
NEB-213ENST00000484968 FAM161AQ3B820 660 aa11.74□□□□□ -0.53
NEB-213ENST00000484968 SEC31BQ9NQW1 1179 aa11.74□□□□□ -0.53
NEB-213ENST00000484968 GTF3C3Q9Y5Q9 886 aa11.74□□□□□ -0.53
NEB-213ENST00000484968 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.74□□□□□ -0.53
NEB-213ENST00000484968 RIC1Q4ADV7 1423 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms