RNA–Protein interactions for RNA: ENST00000484767.5

SND1-211, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-211ENST00000484767 ABCC6O95255 1503 aa10.94□□□□□ -0.66
SND1-211ENST00000484767 PLEKHG2Q9H7P9 1386 aa10.94□□□□□ -0.66
SND1-211ENST00000484767 IFIT2P09913 472 aaKnown RBP10.94□□□□□ -0.66
SND1-211ENST00000484767 CHAF1AQ13111 956 aaPredicted RBP10.94□□□□□ -0.66
SND1-211ENST00000484767 OS9Q13438 667 aaPredicted RBP10.94□□□□□ -0.66
SND1-211ENST00000484767 PLEKHO1Q53GL0 409 aaPredicted RBP10.94□□□□□ -0.66
SND1-211ENST00000484767 DNTTIP2Q5QJE6 756 aaKnown RBP10.94□□□□□ -0.66
SND1-211ENST00000484767 CWC27Q6UX04 472 aaKnown RBP10.94□□□□□ -0.66
SND1-211ENST00000484767 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.94□□□□□ -0.66
SND1-211ENST00000484767 THEMISQ8N1K5 641 aaPredicted RBP10.94□□□□□ -0.66
SND1-211ENST00000484767 KCNH5Q8NCM2 988 aa10.94□□□□□ -0.66
SND1-211ENST00000484767 MAP4K1Q92918 833 aa10.94□□□□□ -0.66
SND1-211ENST00000484767 CCDC94Q9BW85 323 aaPredicted RBP10.94□□□□□ -0.66
SND1-211ENST00000484767 SCAND2PQ9GZW5 306 aaPredicted RBP10.94□□□□□ -0.66
SND1-211ENST00000484767 GDPD2Q9HCC8 539 aa10.94□□□□□ -0.66
SND1-211ENST00000484767 DDX19AQ9NUU7 478 aaKnown RBP10.94□□□□□ -0.66
SND1-211ENST00000484767 SLIT3O75094 1523 aa10.94□□□□□ -0.66
SND1-211ENST00000484767 PI4KAP2A4QPH2 592 aa10.93□□□□□ -0.66
SND1-211ENST00000484767 SOX12O15370 315 aa10.93□□□□□ -0.66
SND1-211ENST00000484767 GIGYF1O75420 1035 aaPredicted RBP10.93□□□□□ -0.66
SND1-211ENST00000484767 NBPF7P0C2Y1 421 aaPredicted RBP10.93□□□□□ -0.66
SND1-211ENST00000484767 HCLS1P14317 486 aaPredicted RBP10.93□□□□□ -0.66
SND1-211ENST00000484767 RBM10P98175 930 aaKnown RBP10.93□□□□□ -0.66
SND1-211ENST00000484767 KRT32Q14532 448 aa10.93□□□□□ -0.66
SND1-211ENST00000484767 SYCP1Q15431 976 aa10.93□□□□□ -0.66
SND1-211ENST00000484767 KSR2Q6VAB6 950 aa10.93□□□□□ -0.66
SND1-211ENST00000484767 RBM43Q6ZSC3 357 aaKnown RBP10.93□□□□□ -0.66
SND1-211ENST00000484767 CCDC83Q8IWF9 413 aa10.93□□□□□ -0.66
SND1-211ENST00000484767 PI4KAP1Q8N8J0 262 aa10.93□□□□□ -0.66
SND1-211ENST00000484767 FAM200AQ8TCP9 573 aa10.93□□□□□ -0.66
SND1-211ENST00000484767 NECTIN2Q92692 538 aa10.93□□□□□ -0.66
SND1-211ENST00000484767 JAKMIP1Q96N16 626 aaKnown RBP10.93□□□□□ -0.66
SND1-211ENST00000484767 CHPF2Q9P2E5 772 aa10.93□□□□□ -0.66
SND1-211ENST00000484767 NUTM2FA1L443 756 aa10.92□□□□□ -0.66
SND1-211ENST00000484767 FIBPO43427 364 aa10.92□□□□□ -0.66
SND1-211ENST00000484767 DDX58O95786 925 aaKnown RBP10.92□□□□□ -0.66
SND1-211ENST00000484767 TEFQ10587 303 aa10.92□□□□□ -0.66
SND1-211ENST00000484767 MAP3K11Q16584 847 aa10.92□□□□□ -0.66
SND1-211ENST00000484767 CREB3L3Q68CJ9 461 aa10.92□□□□□ -0.66
SND1-211ENST00000484767 ABTB2Q8N961 1025 aa10.92□□□□□ -0.66
SND1-211ENST00000484767 LINS1Q8NG48 757 aa10.92□□□□□ -0.66
SND1-211ENST00000484767 KIAA1524Q8TCG1 905 aa10.92□□□□□ -0.66
SND1-211ENST00000484767 NUP62CLQ9H1M0 184 aa10.92□□□□□ -0.66
SND1-211ENST00000484767 SSUH2Q9Y2M2 353 aa10.92□□□□□ -0.66
SND1-211ENST00000484767 SCN11AQ9UI33 1791 aa10.92□□□□□ -0.66
SND1-211ENST00000484767 COL15A1P39059 1388 aa10.91□□□□□ -0.66
SND1-211ENST00000484767 MED23Q9ULK4 1368 aa10.91□□□□□ -0.66
SND1-211ENST00000484767 NPHP3Q7Z494 1330 aa10.91□□□□□ -0.66
SND1-211ENST00000484767 MAP4K4O95819 1239 aaPredicted RBP10.91□□□□□ -0.66
SND1-211ENST00000484767 PTH1RQ03431 593 aa10.91□□□□□ -0.66
SND1-211ENST00000484767 DNM1Q05193 864 aaKnown RBP10.91□□□□□ -0.66
SND1-211ENST00000484767 LARP1BQ659C4 914 aaKnown RBP10.91□□□□□ -0.66
SND1-211ENST00000484767 PRPF40BQ6NWY9 871 aaKnown RBP10.91□□□□□ -0.66
SND1-211ENST00000484767 CHMP4CQ96CF2 233 aa10.91□□□□□ -0.66
SND1-211ENST00000484767 SLC26A8Q96RN1 970 aa10.91□□□□□ -0.66
SND1-211ENST00000484767 C9orf78Q9NZ63 289 aaPredicted RBP10.91□□□□□ -0.66
SND1-211ENST00000484767 SPG7Q9UQ90 795 aa10.91□□□□□ -0.66
SND1-211ENST00000484767 KIF3AQ9Y496 699 aa10.91□□□□□ -0.66
SND1-211ENST00000484767 RBM8AQ9Y5S9 174 aaKnown RBP10.91□□□□□ -0.66
SND1-211ENST00000484767 BTBD11A6QL63 1104 aa10.9□□□□□ -0.66
SND1-211ENST00000484767 SLC27A2O14975 620 aa10.9□□□□□ -0.66
SND1-211ENST00000484767 LARGE1O95461 756 aa10.9□□□□□ -0.66
SND1-211ENST00000484767 EIF2S2P20042 333 aaKnown RBP10.9□□□□□ -0.66
SND1-211ENST00000484767 RPS6KB1P23443 525 aa10.9□□□□□ -0.66
SND1-211ENST00000484767 CDC25BP30305 580 aa10.9□□□□□ -0.66
SND1-211ENST00000484767 G3BP1Q13283 466 aaKnown RBP eCLIP10.9□□□□□ -0.665e-11■■■□□ 18.8
SND1-211ENST00000484767 ME3Q16798 604 aa10.9□□□□□ -0.66
SND1-211ENST00000484767 ATL3Q6DD88 541 aa10.9□□□□□ -0.66
SND1-211ENST00000484767 BLOC1S2Q6QNY1 142 aa10.9□□□□□ -0.66
SND1-211ENST00000484767 AFDNP55196 1824 aaKnown RBP10.9□□□□□ -0.66
SND1-211ENST00000484767 NPHP4O75161 1426 aaPredicted RBP10.9□□□□□ -0.66
SND1-211ENST00000484767 ZNF142P52746 1687 aaPredicted RBP10.89□□□□□ -0.67
SND1-211ENST00000484767 SPEF2Q9C093 1822 aa10.89□□□□□ -0.67
SND1-211ENST00000484767 VPS37CA5D8V6 355 aaPredicted RBP10.89□□□□□ -0.67
SND1-211ENST00000484767 RNMTO43148 476 aaKnown RBP10.89□□□□□ -0.67
SND1-211ENST00000484767 KCNJ4P48050 445 aa10.89□□□□□ -0.67
SND1-211ENST00000484767 UTP14CQ5TAP6 766 aaKnown RBP10.89□□□□□ -0.67
SND1-211ENST00000484767 USPL1Q5W0Q7 1092 aa10.89□□□□□ -0.67
SND1-211ENST00000484767 GIMAP6Q6P9H5 292 aa10.89□□□□□ -0.67
SND1-211ENST00000484767 AACSQ86V21 672 aa10.89□□□□□ -0.67
SND1-211ENST00000484767 TDRD7Q8NHU6 1098 aaKnown RBP10.89□□□□□ -0.67
SND1-211ENST00000484767 AKT1S1Q96B36 256 aa10.89□□□□□ -0.67
SND1-211ENST00000484767 CLSTN2Q9H4D0 955 aa10.89□□□□□ -0.67
SND1-211ENST00000484767 ZSCAN16Q9H4T2 348 aaPredicted RBP10.89□□□□□ -0.67
SND1-211ENST00000484767 PHF8Q9UPP1 1060 aa10.89□□□□□ -0.67
SND1-211ENST00000484767 KIF1AQ12756 1690 aa10.89□□□□□ -0.67
SND1-211ENST00000484767 LAMA4Q16363 1823 aa10.88□□□□□ -0.67
SND1-211ENST00000484767 LAMB4A4D0S4 1761 aa10.88□□□□□ -0.67
SND1-211ENST00000484767 GOLGA6L4A6NEF3 574 aa10.88□□□□□ -0.67
SND1-211ENST00000484767 GRM8O00222 908 aa10.88□□□□□ -0.67
SND1-211ENST00000484767 CTAGE5O15320 804 aa10.88□□□□□ -0.67
SND1-211ENST00000484767 NEMFO60524 1076 aa10.88□□□□□ -0.67
SND1-211ENST00000484767 TYRO3Q06418 890 aa10.88□□□□□ -0.67
SND1-211ENST00000484767 ST3GAL1Q11201 340 aa10.88□□□□□ -0.67
SND1-211ENST00000484767 NMIQ13287 307 aaPredicted RBP10.88□□□□□ -0.67
SND1-211ENST00000484767 ADCK5Q3MIX3 580 aa10.88□□□□□ -0.67
SND1-211ENST00000484767 FOXD4L6Q3SYB3 417 aaPredicted RBP10.88□□□□□ -0.67
SND1-211ENST00000484767 C1orf141Q5JVX7 400 aa10.88□□□□□ -0.67
SND1-211ENST00000484767 ZNF530Q6P9A1 599 aaPredicted RBP10.88□□□□□ -0.67
SND1-211ENST00000484767 FOXD4L3Q6VB84 417 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms