RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 RFC4P35249 363 aa25.56■■□□□ 1.68
VCPKMT-203ENST00000484763 EN1Q05925 392 aaPredicted RBP25.56■■□□□ 1.68
VCPKMT-203ENST00000484763 SUCLG2Q96I99 432 aa25.56■■□□□ 1.68
VCPKMT-203ENST00000484763 TUBGCP6Q96RT7 1819 aa25.55■■□□□ 1.68
VCPKMT-203ENST00000484763 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.55■■□□□ 1.68
VCPKMT-203ENST00000484763 CASP7P55210 303 aa25.55■■□□□ 1.68
VCPKMT-203ENST00000484763 UBN2Q6ZU65 1347 aa25.55■■□□□ 1.68
VCPKMT-203ENST00000484763 USP42Q9H9J4 1324 aaKnown RBP25.55■■□□□ 1.68
VCPKMT-203ENST00000484763 ATP8B2P98198 1209 aa25.54■■□□□ 1.68
VCPKMT-203ENST00000484763 EZH2Q15910 746 aaKnown RBP25.54■■□□□ 1.68
VCPKMT-203ENST00000484763 USPL1Q5W0Q7 1092 aa25.54■■□□□ 1.68
VCPKMT-203ENST00000484763 AKT1S1Q96B36 256 aa25.54■■□□□ 1.68
VCPKMT-203ENST00000484763 PCCAP05165 728 aaPredicted RBP25.53■■□□□ 1.68
VCPKMT-203ENST00000484763 ZNF827Q17R98 1081 aa25.53■■□□□ 1.68
VCPKMT-203ENST00000484763 PARP10Q53GL7 1025 aa25.53■■□□□ 1.68
VCPKMT-203ENST00000484763 ZBTB38Q8NAP3 1195 aaPredicted RBP25.53■■□□□ 1.68
VCPKMT-203ENST00000484763 KAZALD1Q96I82 304 aa25.53■■□□□ 1.68
VCPKMT-203ENST00000484763 SRP68Q9UHB9 627 aaKnown RBP25.53■■□□□ 1.68
VCPKMT-203ENST00000484763 NIP7Q9Y221 180 aaKnown RBP eCLIP25.53■■□□□ 1.68
VCPKMT-203ENST00000484763 MTX1Q13505 466 aa25.52■■□□□ 1.68
VCPKMT-203ENST00000484763 JARID2Q92833 1246 aaPredicted RBP25.52■■□□□ 1.68
VCPKMT-203ENST00000484763 BICC1Q9H694 974 aaKnown RBP25.52■■□□□ 1.68
VCPKMT-203ENST00000484763 BCL2L12Q9HB09 334 aa25.52■■□□□ 1.68
VCPKMT-203ENST00000484763 CCDC125Q86Z20 511 aa25.51■■□□□ 1.67
VCPKMT-203ENST00000484763 SMC5Q8IY18 1101 aa25.51■■□□□ 1.67
VCPKMT-203ENST00000484763 TFCP2L1Q9NZI6 479 aa25.51■■□□□ 1.67
VCPKMT-203ENST00000484763 PNMA6EA0A0J9YXQ4 647 aa25.51■■□□□ 1.67
VCPKMT-203ENST00000484763 PPP1R42Q7Z4L9 355 aa25.51■■□□□ 1.67
VCPKMT-203ENST00000484763 GCC1Q96CN9 775 aa25.51■■□□□ 1.67
VCPKMT-203ENST00000484763 COL24A1Q17RW2 1714 aa25.5■■□□□ 1.67
VCPKMT-203ENST00000484763 RTL5Q5HYW3 569 aaPredicted RBP25.49■■□□□ 1.67
VCPKMT-203ENST00000484763 SSH3Q8TE77 659 aa25.49■■□□□ 1.67
VCPKMT-203ENST00000484763 TRMT112Q9UI30 125 aaKnown RBP25.49■■□□□ 1.67
VCPKMT-203ENST00000484763 CDHR2Q9BYE9 1310 aa25.49■■□□□ 1.67
VCPKMT-203ENST00000484763 SRGAP3O43295 1099 aa25.49■■□□□ 1.67
VCPKMT-203ENST00000484763 FAM89AQ96GI7 184 aa25.48■■□□□ 1.67
VCPKMT-203ENST00000484763 DCTPP1Q9H773 170 aa25.48■■□□□ 1.67
VCPKMT-203ENST00000484763 POLA2Q14181 598 aa25.47■■□□□ 1.67
VCPKMT-203ENST00000484763 RABL6Q3YEC7 729 aaPredicted RBP25.47■■□□□ 1.67
VCPKMT-203ENST00000484763 EPHA10Q5JZY3 1008 aa25.47■■□□□ 1.67
VCPKMT-203ENST00000484763 SUSD4Q5VX71 490 aa25.47■■□□□ 1.67
VCPKMT-203ENST00000484763 DEFB132Q7Z7B7 95 aa25.47■■□□□ 1.67
VCPKMT-203ENST00000484763 UTP14AQ9BVJ6 771 aaKnown RBP25.47■■□□□ 1.67
VCPKMT-203ENST00000484763 TBC1D9BQ66K14 1250 aa25.47■■□□□ 1.67
VCPKMT-203ENST00000484763 FLAD1Q8NFF5 587 aa25.47■■□□□ 1.67
VCPKMT-203ENST00000484763 MYH3P11055 1940 aa25.46■■□□□ 1.67
VCPKMT-203ENST00000484763 LAMB2P55268 1798 aa25.46■■□□□ 1.67
VCPKMT-203ENST00000484763 QSER1Q2KHR3 1735 aa25.46■■□□□ 1.67
VCPKMT-203ENST00000484763 PLA2G12BQ9BX93 195 aa25.45■■□□□ 1.66
VCPKMT-203ENST00000484763 SH3TC1Q8TE82 1336 aa25.45■■□□□ 1.66
VCPKMT-203ENST00000484763 NTSR2O95665 410 aa25.44■■□□□ 1.66
VCPKMT-203ENST00000484763 FOXO4P98177 505 aa25.44■■□□□ 1.66
VCPKMT-203ENST00000484763 SETDB2Q96T68 719 aa25.44■■□□□ 1.66
VCPKMT-203ENST00000484763 BICDL1Q6ZP65 573 aa25.44■■□□□ 1.66
VCPKMT-203ENST00000484763 FAM177BA6PVY3 158 aa25.43■■□□□ 1.66
VCPKMT-203ENST00000484763 STK32BQ9NY57 414 aa25.43■■□□□ 1.66
VCPKMT-203ENST00000484763 DDX60Q8IY21 1712 aaKnown RBP25.43■■□□□ 1.66
VCPKMT-203ENST00000484763 IRS4O14654 1257 aaPredicted RBP25.42■■□□□ 1.66
VCPKMT-203ENST00000484763 GYS1P13807 737 aa25.42■■□□□ 1.66
VCPKMT-203ENST00000484763 ANO8Q9HCE9 1232 aaPredicted RBP25.42■■□□□ 1.66
VCPKMT-203ENST00000484763 PDZRN3Q9UPQ7 1066 aa25.42■■□□□ 1.66
VCPKMT-203ENST00000484763 SLC15A2Q16348 729 aa25.42■■□□□ 1.66
VCPKMT-203ENST00000484763 LMBR1LQ6UX01 489 aa25.42■■□□□ 1.66
VCPKMT-203ENST00000484763 SYNE4Q8N205 404 aa25.42■■□□□ 1.66
VCPKMT-203ENST00000484763 PNPLA7Q6ZV29 1317 aa25.41■■□□□ 1.66
VCPKMT-203ENST00000484763 COL23A1Q86Y22 540 aaPredicted RBP25.41■■□□□ 1.66
VCPKMT-203ENST00000484763 NYXQ9GZU5 481 aa25.41■■□□□ 1.66
VCPKMT-203ENST00000484763 CARMIL3Q8ND23 1372 aa25.41■■□□□ 1.66
VCPKMT-203ENST00000484763 HSP90B1P14625 803 aaKnown RBP25.4■■□□□ 1.66
VCPKMT-203ENST00000484763 NUCB1Q02818 461 aa25.4■■□□□ 1.66
VCPKMT-203ENST00000484763 EXOC6BQ9Y2D4 811 aa25.4■■□□□ 1.66
VCPKMT-203ENST00000484763 PDE8AO60658 829 aa25.39■■□□□ 1.65
VCPKMT-203ENST00000484763 MSH5O43196 834 aa25.38■■□□□ 1.65
VCPKMT-203ENST00000484763 NFIXQ14938 502 aa25.38■■□□□ 1.65
VCPKMT-203ENST00000484763 ANKRD45Q5TZF3 282 aa25.38■■□□□ 1.65
VCPKMT-203ENST00000484763 CHMP3Q9Y3E7 222 aa25.38■■□□□ 1.65
VCPKMT-203ENST00000484763 SURF6O75683 361 aaKnown RBP25.37■■□□□ 1.65
VCPKMT-203ENST00000484763 CTSWP56202 376 aa25.37■■□□□ 1.65
VCPKMT-203ENST00000484763 NBPF5PQ86XG9 351 aaPredicted RBP25.37■■□□□ 1.65
VCPKMT-203ENST00000484763 NUTM1Q86Y26 1132 aa25.37■■□□□ 1.65
VCPKMT-203ENST00000484763 HSP90AB4PQ58FF6 505 aa25.37■■□□□ 1.65
VCPKMT-203ENST00000484763 CHD1LQ86WJ1 897 aa25.37■■□□□ 1.65
VCPKMT-203ENST00000484763 NOP58Q9Y2X3 529 aaKnown RBP25.37■■□□□ 1.65
VCPKMT-203ENST00000484763 CSF1RP07333 972 aa25.36■■□□□ 1.65
VCPKMT-203ENST00000484763 SKAP1Q86WV1 359 aa25.36■■□□□ 1.65
VCPKMT-203ENST00000484763 PELP1Q8IZL8 1130 aaKnown RBP25.36■■□□□ 1.65
VCPKMT-203ENST00000484763 ZBTB47Q9UFB7 747 aaPredicted RBP25.36■■□□□ 1.65
VCPKMT-203ENST00000484763 RFX5P48382 616 aaPredicted RBP25.35■■□□□ 1.65
VCPKMT-203ENST00000484763 TPTE2Q6XPS3 522 aa25.35■■□□□ 1.65
VCPKMT-203ENST00000484763 CASZ1Q86V15 1759 aa25.35■■□□□ 1.65
VCPKMT-203ENST00000484763 RAB11FIP3O75154 756 aa25.35■■□□□ 1.65
VCPKMT-203ENST00000484763 HCLS1P14317 486 aaPredicted RBP25.35■■□□□ 1.65
VCPKMT-203ENST00000484763 GTF2E1P29083 439 aaPredicted RBP25.35■■□□□ 1.65
VCPKMT-203ENST00000484763 ERFEQ4G0M1 354 aa25.35■■□□□ 1.65
VCPKMT-203ENST00000484763 COPRSQ9NQ92 184 aa25.35■■□□□ 1.65
VCPKMT-203ENST00000484763 PA2G4Q9UQ80 394 aaKnown RBP25.35■■□□□ 1.65
VCPKMT-203ENST00000484763 APBB1O00213 710 aa25.34■■□□□ 1.65
VCPKMT-203ENST00000484763 TTLL11Q8NHH1 800 aa25.34■■□□□ 1.65
VCPKMT-203ENST00000484763 LNPKQ9C0E8 428 aa25.34■■□□□ 1.65
VCPKMT-203ENST00000484763 TM4SF1P30408 202 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms