RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 TM4SF1P30408 202 aa11.68□□□□□ -0.54
DDX39B-221ENST00000484566 NFATC2IPQ8NCF5 419 aa11.68□□□□□ -0.54
DDX39B-221ENST00000484566 SCN11AQ9UI33 1791 aa11.68□□□□□ -0.54
DDX39B-221ENST00000484566 DICER1Q9UPY3 1922 aaKnown RBP11.68□□□□□ -0.54
DDX39B-221ENST00000484566 COL15A1P39059 1388 aa11.67□□□□□ -0.54
DDX39B-221ENST00000484566 SOS1Q07889 1333 aaPredicted RBP11.67□□□□□ -0.54
DDX39B-221ENST00000484566 WDR33Q9C0J8 1336 aaKnown RBP11.67□□□□□ -0.54
DDX39B-221ENST00000484566 TMEM88BA6NKF7 163 aa11.67□□□□□ -0.54
DDX39B-221ENST00000484566 NFIXQ14938 502 aa11.67□□□□□ -0.54
DDX39B-221ENST00000484566 DEFB115Q30KQ5 88 aa11.67□□□□□ -0.54
DDX39B-221ENST00000484566 INTS5Q6P9B9 1019 aaKnown RBP11.67□□□□□ -0.54
DDX39B-221ENST00000484566 C2CD5Q86YS7 1000 aa11.67□□□□□ -0.54
DDX39B-221ENST00000484566 RASSF10A6NK89 507 aa11.66□□□□□ -0.54
DDX39B-221ENST00000484566 H0YIN7 160 aa11.66□□□□□ -0.54
DDX39B-221ENST00000484566 NFKBIEO00221 500 aa11.66□□□□□ -0.54
DDX39B-221ENST00000484566 SERPINB2P05120 415 aa11.66□□□□□ -0.54
DDX39B-221ENST00000484566 SOX10P56693 466 aa11.66□□□□□ -0.54
DDX39B-221ENST00000484566 DNAJC10Q8IXB1 793 aa11.66□□□□□ -0.54
DDX39B-221ENST00000484566 NARFQ9UHQ1 456 aa11.66□□□□□ -0.54
DDX39B-221ENST00000484566 PITPNM2Q9BZ72 1349 aa11.65□□□□□ -0.54
DDX39B-221ENST00000484566 DGKZQ13574 1117 aa11.65□□□□□ -0.54
DDX39B-221ENST00000484566 ERFEQ4G0M1 354 aa11.65□□□□□ -0.54
DDX39B-221ENST00000484566 SZT2Q5T011 3432 aa11.65□□□□□ -0.54
DDX39B-221ENST00000484566 FER1L6Q2WGJ9 1857 aa11.64□□□□□ -0.55
DDX39B-221ENST00000484566 HOXB1P14653 301 aaPredicted RBP11.64□□□□□ -0.55
DDX39B-221ENST00000484566 FXR1P51114 621 aaKnown RBP eCLIP11.64□□□□□ -0.55
DDX39B-221ENST00000484566 POLR3GLQ9BT43 218 aa11.64□□□□□ -0.55
DDX39B-221ENST00000484566 BEGAINQ9BUH8 593 aa11.64□□□□□ -0.55
DDX39B-221ENST00000484566 CARMIL3Q8ND23 1372 aa11.64□□□□□ -0.55
DDX39B-221ENST00000484566 AEBP1Q8IUX7 1158 aa11.63□□□□□ -0.55
DDX39B-221ENST00000484566 PTCD2Q8WV60 388 aaKnown RBP11.63□□□□□ -0.55
DDX39B-221ENST00000484566 ZNF622Q969S3 477 aaKnown RBP eCLIP11.63□□□□□ -0.556e-14■□□□□ 10.2
DDX39B-221ENST00000484566 TAOK3Q9H2K8 898 aa11.63□□□□□ -0.55
DDX39B-221ENST00000484566 PDZRN3Q9UPQ7 1066 aa11.63□□□□□ -0.55
DDX39B-221ENST00000484566 ZBTB1Q9Y2K1 713 aa11.63□□□□□ -0.55
DDX39B-221ENST00000484566 PCDHGA4Q9Y5G9 962 aa11.63□□□□□ -0.55
DDX39B-221ENST00000484566 MRC1P22897 1456 aa11.63□□□□□ -0.55
DDX39B-221ENST00000484566 THSD7BQ9C0I4 1608 aa11.62□□□□□ -0.55
DDX39B-221ENST00000484566 IQCA1LA6NCM1 817 aa11.62□□□□□ -0.55
DDX39B-221ENST00000484566 CYP19A1P11511 503 aaPredicted RBP11.62□□□□□ -0.55
DDX39B-221ENST00000484566 ARSIQ5FYB1 569 aa11.62□□□□□ -0.55
DDX39B-221ENST00000484566 SULT6B1Q6IMI4 303 aa11.62□□□□□ -0.55
DDX39B-221ENST00000484566 BICDL1Q6ZP65 573 aa11.62□□□□□ -0.55
DDX39B-221ENST00000484566 SLC52A2Q9HAB3 445 aa11.62□□□□□ -0.55
DDX39B-221ENST00000484566 TSKSQ9UJT2 592 aa11.62□□□□□ -0.55
DDX39B-221ENST00000484566 CACNA1SQ13698 1873 aa11.61□□□□□ -0.55
DDX39B-221ENST00000484566 ANKRD31Q8N7Z5 1873 aa11.61□□□□□ -0.55
DDX39B-221ENST00000484566 COL11A2P13942 1736 aaPredicted RBP11.61□□□□□ -0.55
DDX39B-221ENST00000484566 SCN4AP35499 1836 aa11.61□□□□□ -0.55
DDX39B-221ENST00000484566 C21orf2O43822 256 aa11.61□□□□□ -0.55
DDX39B-221ENST00000484566 ITGBL1O95965 494 aaPredicted RBP11.61□□□□□ -0.55
DDX39B-221ENST00000484566 PDE6BP35913 854 aa11.61□□□□□ -0.55
DDX39B-221ENST00000484566 MAP3K9P80192 1104 aa11.61□□□□□ -0.55
DDX39B-221ENST00000484566 E2F4Q16254 413 aa11.61□□□□□ -0.55
DDX39B-221ENST00000484566 AKAP4Q5JQC9 854 aa11.61□□□□□ -0.55
DDX39B-221ENST00000484566 SLC17A8Q8NDX2 589 aa11.61□□□□□ -0.55
DDX39B-221ENST00000484566 BCL2L12Q9HB09 334 aa11.61□□□□□ -0.55
DDX39B-221ENST00000484566 SCN7AQ01118 1682 aa11.61□□□□□ -0.55
DDX39B-221ENST00000484566 LTBP3Q9NS15 1303 aa11.6□□□□□ -0.55
DDX39B-221ENST00000484566 A0A087WZG4 1122 aa11.6□□□□□ -0.55
DDX39B-221ENST00000484566 NPHP1O15259 732 aa11.6□□□□□ -0.55
DDX39B-221ENST00000484566 GPR153Q6NV75 609 aa11.6□□□□□ -0.55
DDX39B-221ENST00000484566 LDHDQ86WU2 507 aa11.6□□□□□ -0.55
DDX39B-221ENST00000484566 COL6A3P12111 3177 aa11.6□□□□□ -0.55
DDX39B-221ENST00000484566 LTBP1Q14766 1721 aa11.6□□□□□ -0.55
DDX39B-221ENST00000484566 ZNF316A6NFI3 1004 aaPredicted RBP11.59□□□□□ -0.55
DDX39B-221ENST00000484566 DDNO94850 711 aaPredicted RBP11.59□□□□□ -0.55
DDX39B-221ENST00000484566 CANXP27824 592 aaKnown RBP11.59□□□□□ -0.55
DDX39B-221ENST00000484566 EMP3P54852 163 aa11.59□□□□□ -0.55
DDX39B-221ENST00000484566 SLC39A6Q13433 755 aa11.59□□□□□ -0.55
DDX39B-221ENST00000484566 SOGA3Q5TF21 947 aa11.59□□□□□ -0.55
DDX39B-221ENST00000484566 VSIG10Q8N0Z9 540 aa11.59□□□□□ -0.55
DDX39B-221ENST00000484566 NBPF15Q8N660 670 aa11.59□□□□□ -0.55
DDX39B-221ENST00000484566 BRIP1Q9BX63 1249 aa11.59□□□□□ -0.55
DDX39B-221ENST00000484566 ARFGEF2Q9Y6D5 1785 aa11.59□□□□□ -0.55
DDX39B-221ENST00000484566 STARD3NLO95772 234 aa11.58□□□□□ -0.56
DDX39B-221ENST00000484566 MORC1Q86VD1 984 aa11.58□□□□□ -0.56
DDX39B-221ENST00000484566 OXER1Q8TDS5 423 aa11.58□□□□□ -0.56
DDX39B-221ENST00000484566 CNKSR1Q969H4 720 aa11.58□□□□□ -0.56
DDX39B-221ENST00000484566 UBR2Q8IWV8 1755 aa11.58□□□□□ -0.56
DDX39B-221ENST00000484566 RNMTO43148 476 aaKnown RBP11.57□□□□□ -0.56
DDX39B-221ENST00000484566 ST5P78524 1137 aa11.57□□□□□ -0.56
DDX39B-221ENST00000484566 CAMK2BQ13554 666 aa11.57□□□□□ -0.56
DDX39B-221ENST00000484566 EAPPQ56P03 285 aaPredicted RBP11.57□□□□□ -0.56
DDX39B-221ENST00000484566 TBC1D9BQ66K14 1250 aa11.57□□□□□ -0.56
DDX39B-221ENST00000484566 PRR5LQ6MZQ0 368 aa11.57□□□□□ -0.56
DDX39B-221ENST00000484566 NPM2Q86SE8 214 aaKnown RBP11.57□□□□□ -0.56
DDX39B-221ENST00000484566 TTC5Q8N0Z6 440 aa11.57□□□□□ -0.56
DDX39B-221ENST00000484566 CNBD1Q8NA66 436 aa11.57□□□□□ -0.56
DDX39B-221ENST00000484566 ZNF330Q9Y3S2 320 aaPredicted RBP11.57□□□□□ -0.56
DDX39B-221ENST00000484566 SLX4Q8IY92 1834 aa11.57□□□□□ -0.56
DDX39B-221ENST00000484566 MARVELD3Q96A59 401 aa11.56□□□□□ -0.56
DDX39B-221ENST00000484566 GPR101Q96P66 508 aaPredicted RBP11.56□□□□□ -0.56
DDX39B-221ENST00000484566 TAF1DQ9H5J8 278 aaPredicted RBP11.56□□□□□ -0.56
DDX39B-221ENST00000484566 LGR6Q9HBX8 967 aa11.56□□□□□ -0.56
DDX39B-221ENST00000484566 MKI67P46013 3256 aaKnown RBP11.55□□□□□ -0.56
DDX39B-221ENST00000484566 EIF5P55010 431 aaKnown RBP11.55□□□□□ -0.56
DDX39B-221ENST00000484566 STYK1Q6J9G0 422 aa11.55□□□□□ -0.56
DDX39B-221ENST00000484566 PRPF40BQ6NWY9 871 aaKnown RBP11.55□□□□□ -0.56
DDX39B-221ENST00000484566 CCDC24Q8N4L8 307 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms