RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.58■■□□□ 1.36
LIMS2-215ENST00000484252 AXIN2Q9Y2T1 843 aa23.58■■□□□ 1.36
LIMS2-215ENST00000484252 MRC1P22897 1456 aa23.57■■□□□ 1.36
LIMS2-215ENST00000484252 PSMA5P28066 241 aa23.57■■□□□ 1.36
LIMS2-215ENST00000484252 ADCK5Q3MIX3 580 aa23.57■■□□□ 1.36
LIMS2-215ENST00000484252 KRT28Q7Z3Y7 464 aa23.57■■□□□ 1.36
LIMS2-215ENST00000484252 RIC3Q7Z5B4 369 aa23.57■■□□□ 1.36
LIMS2-215ENST00000484252 EAF2Q96CJ1 260 aaPredicted RBP23.57■■□□□ 1.36
LIMS2-215ENST00000484252 RBM8AQ9Y5S9 174 aaKnown RBP23.57■■□□□ 1.36
LIMS2-215ENST00000484252 GJB2P29033 226 aa23.56■■□□□ 1.36
LIMS2-215ENST00000484252 CREB3L3Q68CJ9 461 aa23.56■■□□□ 1.36
LIMS2-215ENST00000484252 CCDC83Q8IWF9 413 aa23.56■■□□□ 1.36
LIMS2-215ENST00000484252 ERBB3P21860 1342 aa23.56■■□□□ 1.36
LIMS2-215ENST00000484252 LARGE1O95461 756 aa23.56■■□□□ 1.36
LIMS2-215ENST00000484252 CPA1P15085 419 aa23.56■■□□□ 1.36
LIMS2-215ENST00000484252 ZNF790Q6PG37 636 aa23.56■■□□□ 1.36
LIMS2-215ENST00000484252 IGKV5-2P06315 115 aa23.55■■□□□ 1.36
LIMS2-215ENST00000484252 AIMP1Q12904 312 aaKnown RBP23.55■■□□□ 1.36
LIMS2-215ENST00000484252 LARP6Q9BRS8 491 aaKnown RBP23.55■■□□□ 1.36
LIMS2-215ENST00000484252 KCNJ4P48050 445 aa23.55■■□□□ 1.36
LIMS2-215ENST00000484252 NMIQ13287 307 aaPredicted RBP23.55■■□□□ 1.36
LIMS2-215ENST00000484252 RNF20Q5VTR2 975 aa23.55■■□□□ 1.36
LIMS2-215ENST00000484252 RAPGEF4Q8WZA2 1011 aa23.55■■□□□ 1.36
LIMS2-215ENST00000484252 PDCL3Q9H2J4 239 aa23.55■■□□□ 1.36
LIMS2-215ENST00000484252 SLC52A2Q9HAB3 445 aa23.55■■□□□ 1.36
LIMS2-215ENST00000484252 MTMR6Q9Y217 621 aa23.55■■□□□ 1.36
LIMS2-215ENST00000484252 PLEKHG2Q9H7P9 1386 aa23.54■■□□□ 1.36
LIMS2-215ENST00000484252 ABCC6O95255 1503 aa23.53■■□□□ 1.36
LIMS2-215ENST00000484252 NEURL1BA8MQ27 555 aa23.53■■□□□ 1.36
LIMS2-215ENST00000484252 ANKRD1Q15327 319 aa23.53■■□□□ 1.36
LIMS2-215ENST00000484252 CCDC8Q9H0W5 538 aaPredicted RBP23.53■■□□□ 1.36
LIMS2-215ENST00000484252 FAM227BQ96M60 508 aa23.53■■□□□ 1.36
LIMS2-215ENST00000484252 ALDH8A1Q9H2A2 487 aaPredicted RBP23.53■■□□□ 1.36
LIMS2-215ENST00000484252 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.53■■□□□ 1.36
LIMS2-215ENST00000484252 NPHP3Q7Z494 1330 aa23.53■■□□□ 1.36
LIMS2-215ENST00000484252 SCN11AQ9UI33 1791 aa23.53■■□□□ 1.36
LIMS2-215ENST00000484252 GCKRQ14397 625 aa23.52■■□□□ 1.36
LIMS2-215ENST00000484252 FSD1Q9BTV5 496 aa23.52■■□□□ 1.36
LIMS2-215ENST00000484252 METTL22Q9BUU2 404 aaPredicted RBP23.52■■□□□ 1.36
LIMS2-215ENST00000484252 SLC27A2O14975 620 aa23.52■■□□□ 1.35
LIMS2-215ENST00000484252 MED23Q9ULK4 1368 aa23.51■■□□□ 1.35
LIMS2-215ENST00000484252 KDM6AO15550 1401 aaPredicted RBP23.51■■□□□ 1.35
LIMS2-215ENST00000484252 C5P01031 1676 aa23.51■■□□□ 1.35
LIMS2-215ENST00000484252 TCHHQ07283 1943 aa23.51■■□□□ 1.35
LIMS2-215ENST00000484252 ME3Q16798 604 aa23.51■■□□□ 1.35
LIMS2-215ENST00000484252 HMG20BQ9P0W2 317 aa23.51■■□□□ 1.35
LIMS2-215ENST00000484252 C1orf167Q5SNV9 1468 aa23.51■■□□□ 1.35
LIMS2-215ENST00000484252 TATP17735 454 aaPredicted RBP23.5■■□□□ 1.35
LIMS2-215ENST00000484252 JCADQ9P266 1359 aa23.5■■□□□ 1.35
LIMS2-215ENST00000484252 RGPD5Q99666 1765 aa23.5■■□□□ 1.35
LIMS2-215ENST00000484252 COL15A1P39059 1388 aa23.5■■□□□ 1.35
LIMS2-215ENST00000484252 FIBPO43427 364 aa23.5■■□□□ 1.35
LIMS2-215ENST00000484252 XAGE3Q8WTP9 111 aa23.5■■□□□ 1.35
LIMS2-215ENST00000484252 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.5■■□□□ 1.35
LIMS2-215ENST00000484252 ALS2Q96Q42 1657 aa23.49■■□□□ 1.35
LIMS2-215ENST00000484252 PHKG2P15735 406 aa23.49■■□□□ 1.35
LIMS2-215ENST00000484252 PDCP20941 246 aa23.49■■□□□ 1.35
LIMS2-215ENST00000484252 ST3GAL1Q11201 340 aa23.49■■□□□ 1.35
LIMS2-215ENST00000484252 BOLA2Q9H3K6 86 aa23.49■■□□□ 1.35
LIMS2-215ENST00000484252 COPRSQ9NQ92 184 aa23.49■■□□□ 1.35
LIMS2-215ENST00000484252 TLR7Q9NYK1 1049 aaKnown RBP23.49■■□□□ 1.35
LIMS2-215ENST00000484252 PTMAP06454 111 aaKnown RBP23.48■■□□□ 1.35
LIMS2-215ENST00000484252 TSGA10IPQ3SY00 556 aa23.48■■□□□ 1.35
LIMS2-215ENST00000484252 BLOC1S2Q6QNY1 142 aa23.48■■□□□ 1.35
LIMS2-215ENST00000484252 SIL1Q9H173 461 aa23.48■■□□□ 1.35
LIMS2-215ENST00000484252 TPCN1Q9ULQ1 816 aa23.48■■□□□ 1.35
LIMS2-215ENST00000484252 RFX7Q2KHR2 1363 aa23.48■■□□□ 1.35
LIMS2-215ENST00000484252 A0A0D9SFI3 127 aa23.48■■□□□ 1.35
LIMS2-215ENST00000484252 SLC39A6Q13433 755 aa23.48■■□□□ 1.35
LIMS2-215ENST00000484252 COPS6Q7L5N1 327 aa23.48■■□□□ 1.35
LIMS2-215ENST00000484252 MYD88Q99836 296 aa23.48■■□□□ 1.35
LIMS2-215ENST00000484252 MYL6BP14649 208 aa23.47■■□□□ 1.35
LIMS2-215ENST00000484252 DNM1Q05193 864 aaKnown RBP23.47■■□□□ 1.35
LIMS2-215ENST00000484252 IFNL2Q8IZJ0 200 aa23.47■■□□□ 1.35
LIMS2-215ENST00000484252 SNRPA1P09661 255 aaKnown RBP23.46■■□□□ 1.35
LIMS2-215ENST00000484252 ATP5JP18859 108 aa23.46■■□□□ 1.35
LIMS2-215ENST00000484252 RPS6KB1P23443 525 aa23.46■■□□□ 1.35
LIMS2-215ENST00000484252 ANKRD13DQ6ZTN6 518 aa23.46■■□□□ 1.35
LIMS2-215ENST00000484252 PROSER2Q86WR7 435 aaPredicted RBP23.46■■□□□ 1.35
LIMS2-215ENST00000484252 NLRP2Q9NX02 1062 aa23.46■■□□□ 1.35
LIMS2-215ENST00000484252 VPS37CA5D8V6 355 aaPredicted RBP23.45■■□□□ 1.35
LIMS2-215ENST00000484252 ZC3H6P61129 1189 aaKnown RBP23.45■■□□□ 1.35
LIMS2-215ENST00000484252 NFATC2IPQ8NCF5 419 aa23.45■■□□□ 1.35
LIMS2-215ENST00000484252 C19orf44Q9H6X5 657 aa23.45■■□□□ 1.35
LIMS2-215ENST00000484252 KRT32Q14532 448 aa23.45■■□□□ 1.34
LIMS2-215ENST00000484252 LARP1BQ659C4 914 aaKnown RBP23.45■■□□□ 1.34
LIMS2-215ENST00000484252 NECAB1Q8N987 351 aa23.45■■□□□ 1.34
LIMS2-215ENST00000484252 EPHA10Q5JZY3 1008 aa23.44■■□□□ 1.34
LIMS2-215ENST00000484252 FUCA2Q9BTY2 467 aa23.44■■□□□ 1.34
LIMS2-215ENST00000484252 KRT85P78386 507 aa23.44■■□□□ 1.34
LIMS2-215ENST00000484252 RABL6Q3YEC7 729 aaPredicted RBP23.44■■□□□ 1.34
LIMS2-215ENST00000484252 USPL1Q5W0Q7 1092 aa23.44■■□□□ 1.34
LIMS2-215ENST00000484252 LRP10Q7Z4F1 713 aa23.44■■□□□ 1.34
LIMS2-215ENST00000484252 TTC5Q8N0Z6 440 aa23.44■■□□□ 1.34
LIMS2-215ENST00000484252 ZNF496Q96IT1 587 aaPredicted RBP23.44■■□□□ 1.34
LIMS2-215ENST00000484252 DCAF5Q96JK2 942 aa23.44■■□□□ 1.34
LIMS2-215ENST00000484252 ELP1O95163 1332 aa23.43■■□□□ 1.34
LIMS2-215ENST00000484252 RFX5P48382 616 aaPredicted RBP23.43■■□□□ 1.34
LIMS2-215ENST00000484252 KLHDC4Q8TBB5 520 aa23.43■■□□□ 1.34
LIMS2-215ENST00000484252 TNNI3KQ59H18 835 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms