RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 CYB5RLQ6IPT4 315 aa23.42■■□□□ 1.34
RPUSD3-216ENST00000484134 LARP1Q6PKG0 1096 aaKnown RBP23.42■■□□□ 1.34
RPUSD3-216ENST00000484134 LEO1Q8WVC0 666 aaPredicted RBP23.42■■□□□ 1.34
RPUSD3-216ENST00000484134 CLSTN2Q9H4D0 955 aa23.42■■□□□ 1.34
RPUSD3-216ENST00000484134 OGFRQ9NZT2 677 aa23.42■■□□□ 1.34
RPUSD3-216ENST00000484134 NR1I2O75469 434 aa23.42■■□□□ 1.34
RPUSD3-216ENST00000484134 CLASRPQ8N2M8 674 aaKnown RBP23.42■■□□□ 1.34
RPUSD3-216ENST00000484134 DNAAF4Q8WXU2 420 aa23.42■■□□□ 1.34
RPUSD3-216ENST00000484134 MAP4K1Q92918 833 aa23.42■■□□□ 1.34
RPUSD3-216ENST00000484134 SPATA32Q96LK8 384 aa23.42■■□□□ 1.34
RPUSD3-216ENST00000484134 CHPF2Q9P2E5 772 aa23.42■■□□□ 1.34
RPUSD3-216ENST00000484134 PA2G4Q9UQ80 394 aaKnown RBP23.42■■□□□ 1.34
RPUSD3-216ENST00000484134 PGBD1Q96JS3 809 aa23.41■■□□□ 1.34
RPUSD3-216ENST00000484134 DNAJC25Q9H1X3 360 aa23.41■■□□□ 1.34
RPUSD3-216ENST00000484134 SLC27A2O14975 620 aa23.41■■□□□ 1.34
RPUSD3-216ENST00000484134 SYCP1Q15431 976 aa23.41■■□□□ 1.34
RPUSD3-216ENST00000484134 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.41■■□□□ 1.34
RPUSD3-216ENST00000484134 SCAND2PQ9GZW5 306 aaPredicted RBP23.4■■□□□ 1.34
RPUSD3-216ENST00000484134 BABAM1Q9NWV8 329 aa23.4■■□□□ 1.34
RPUSD3-216ENST00000484134 PODXL2Q9NZ53 605 aa23.4■■□□□ 1.34
RPUSD3-216ENST00000484134 ZNF165P49910 485 aa23.4■■□□□ 1.34
RPUSD3-216ENST00000484134 NMIQ13287 307 aaPredicted RBP23.4■■□□□ 1.34
RPUSD3-216ENST00000484134 BCL11BQ9C0K0 894 aaPredicted RBP23.4■■□□□ 1.34
RPUSD3-216ENST00000484134 DDX19AQ9NUU7 478 aaKnown RBP23.4■■□□□ 1.34
RPUSD3-216ENST00000484134 GOLGA6L4A6NEF3 574 aa23.39■■□□□ 1.34
RPUSD3-216ENST00000484134 KCNJ4P48050 445 aa23.39■■□□□ 1.34
RPUSD3-216ENST00000484134 NPHP3Q7Z494 1330 aa23.39■■□□□ 1.34
RPUSD3-216ENST00000484134 PDCP20941 246 aa23.39■■□□□ 1.33
RPUSD3-216ENST00000484134 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.39■■□□□ 1.33
RPUSD3-216ENST00000484134 EVI5LQ96CN4 794 aa23.39■■□□□ 1.33
RPUSD3-216ENST00000484134 CLIP2Q9UDT6 1046 aa23.39■■□□□ 1.33
RPUSD3-216ENST00000484134 TOB2Q14106 344 aaPredicted RBP23.38■■□□□ 1.33
RPUSD3-216ENST00000484134 NWD1Q149M9 1564 aa23.38■■□□□ 1.33
RPUSD3-216ENST00000484134 LTV1Q96GA3 475 aaPredicted RBP23.38■■□□□ 1.33
RPUSD3-216ENST00000484134 ARID5BQ14865 1188 aa23.38■■□□□ 1.33
RPUSD3-216ENST00000484134 KCNQ3O43525 872 aa23.37■■□□□ 1.33
RPUSD3-216ENST00000484134 IFIT2P09913 472 aaKnown RBP23.37■■□□□ 1.33
RPUSD3-216ENST00000484134 STK3Q13188 491 aa23.37■■□□□ 1.33
RPUSD3-216ENST00000484134 TPD52L1Q16890 204 aaPredicted RBP23.37■■□□□ 1.33
RPUSD3-216ENST00000484134 CHD2O14647 1828 aaKnown RBP23.37■■□□□ 1.33
RPUSD3-216ENST00000484134 AGLP35573 1532 aa23.37■■□□□ 1.33
RPUSD3-216ENST00000484134 ADAMTS13Q76LX8 1427 aa23.37■■□□□ 1.33
RPUSD3-216ENST00000484134 ADCY9O60503 1353 aa23.37■■□□□ 1.33
RPUSD3-216ENST00000484134 EIF4A1P60842 406 aaKnown RBP23.37■■□□□ 1.33
RPUSD3-216ENST00000484134 MTX1Q13505 466 aa23.37■■□□□ 1.33
RPUSD3-216ENST00000484134 USHBP1Q8N6Y0 703 aa23.37■■□□□ 1.33
RPUSD3-216ENST00000484134 CCDC112Q8NEF3 446 aa23.37■■□□□ 1.33
RPUSD3-216ENST00000484134 DDX41Q9UJV9 622 aaKnown RBP23.37■■□□□ 1.33
RPUSD3-216ENST00000484134 PAXBP1Q9Y5B6 917 aa23.37■■□□□ 1.33
RPUSD3-216ENST00000484134 USP27XA6NNY8 438 aa23.36■■□□□ 1.33
RPUSD3-216ENST00000484134 HOXC9P31274 260 aa23.36■■□□□ 1.33
RPUSD3-216ENST00000484134 AACSQ86V21 672 aa23.36■■□□□ 1.33
RPUSD3-216ENST00000484134 A0A0D9SFI3 127 aa23.36■■□□□ 1.33
RPUSD3-216ENST00000484134 NUTM2GQ5VZR2 741 aa23.35■■□□□ 1.33
RPUSD3-216ENST00000484134 BLOC1S2Q6QNY1 142 aa23.35■■□□□ 1.33
RPUSD3-216ENST00000484134 NPHP4O75161 1426 aaPredicted RBP23.35■■□□□ 1.33
RPUSD3-216ENST00000484134 RPS6KB1P23443 525 aa23.35■■□□□ 1.33
RPUSD3-216ENST00000484134 PSMA5P28066 241 aa23.35■■□□□ 1.33
RPUSD3-216ENST00000484134 HDGFP51858 240 aaKnown RBP23.35■■□□□ 1.33
RPUSD3-216ENST00000484134 JAK2O60674 1132 aa23.34■■□□□ 1.33
RPUSD3-216ENST00000484134 PDIA4P13667 645 aaKnown RBP23.34■■□□□ 1.33
RPUSD3-216ENST00000484134 BICD2Q8TD16 824 aa23.34■■□□□ 1.33
RPUSD3-216ENST00000484134 ZNF592Q92610 1267 aa23.34■■□□□ 1.33
RPUSD3-216ENST00000484134 LGR6Q9HBX8 967 aa23.34■■□□□ 1.33
RPUSD3-216ENST00000484134 IQCB1Q15051 598 aa23.34■■□□□ 1.33
RPUSD3-216ENST00000484134 NGDNQ8NEJ9 315 aaKnown RBP23.34■■□□□ 1.33
RPUSD3-216ENST00000484134 CGNQ9P2M7 1197 aaKnown RBP23.34■■□□□ 1.33
RPUSD3-216ENST00000484134 PTPRUQ92729 1446 aa23.33■■□□□ 1.33
RPUSD3-216ENST00000484134 A0A0U1RQG5 324 aaPredicted RBP23.33■■□□□ 1.33
RPUSD3-216ENST00000484134 CEP135Q66GS9 1140 aa23.33■■□□□ 1.33
RPUSD3-216ENST00000484134 LRRC8AQ8IWT6 810 aa23.33■■□□□ 1.33
RPUSD3-216ENST00000484134 EAF2Q96CJ1 260 aaPredicted RBP23.33■■□□□ 1.33
RPUSD3-216ENST00000484134 DDX11Q96FC9 970 aa23.33■■□□□ 1.33
RPUSD3-216ENST00000484134 GPATCH3Q96I76 525 aa23.33■■□□□ 1.33
RPUSD3-216ENST00000484134 NLRP6P59044 892 aa23.33■■□□□ 1.32
RPUSD3-216ENST00000484134 KIF18AQ8NI77 898 aa23.33■■□□□ 1.32
RPUSD3-216ENST00000484134 SNRKQ9NRH2 765 aa23.33■■□□□ 1.32
RPUSD3-216ENST00000484134 ADGRL3Q9HAR2 1447 aa23.32■■□□□ 1.32
RPUSD3-216ENST00000484134 C11orf57Q6ZUT1 292 aaPredicted RBP23.32■■□□□ 1.32
RPUSD3-216ENST00000484134 CCDC8Q9H0W5 538 aaPredicted RBP23.32■■□□□ 1.32
RPUSD3-216ENST00000484134 TLR7Q9NYK1 1049 aaKnown RBP23.32■■□□□ 1.32
RPUSD3-216ENST00000484134 MORC2Q9Y6X9 1032 aaPredicted RBP23.32■■□□□ 1.32
RPUSD3-216ENST00000484134 SASH1O94885 1247 aa23.32■■□□□ 1.32
RPUSD3-216ENST00000484134 TMEM2Q9UHN6 1383 aa23.31■■□□□ 1.32
RPUSD3-216ENST00000484134 SLFN14P0C7P3 912 aa23.31■■□□□ 1.32
RPUSD3-216ENST00000484134 CDC25BP30305 580 aa23.31■■□□□ 1.32
RPUSD3-216ENST00000484134 ZNF771Q7L3S4 317 aaPredicted RBP23.31■■□□□ 1.32
RPUSD3-216ENST00000484134 ALDH8A1Q9H2A2 487 aaPredicted RBP23.31■■□□□ 1.32
RPUSD3-216ENST00000484134 CEMIPQ8WUJ3 1361 aa23.31■■□□□ 1.32
RPUSD3-216ENST00000484134 RESTQ13127 1097 aa23.31■■□□□ 1.32
RPUSD3-216ENST00000484134 ANKRD1Q15327 319 aa23.31■■□□□ 1.32
RPUSD3-216ENST00000484134 ZNF589Q86UQ0 364 aaPredicted RBP23.31■■□□□ 1.32
RPUSD3-216ENST00000484134 PIK3C2AO00443 1686 aa23.3■■□□□ 1.32
RPUSD3-216ENST00000484134 C9orf78Q9NZ63 289 aaPredicted RBP23.3■■□□□ 1.32
RPUSD3-216ENST00000484134 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.3■■□□□ 1.32
RPUSD3-216ENST00000484134 ZNF215Q9UL58 517 aaPredicted RBP23.3■■□□□ 1.32
RPUSD3-216ENST00000484134 V9GYY5 206 aaPredicted RBP23.3■■□□□ 1.32
RPUSD3-216ENST00000484134 A0A087WWV3 80 aa23.29■■□□□ 1.32
RPUSD3-216ENST00000484134 RBM6P78332 1123 aaKnown RBP23.29■■□□□ 1.32
RPUSD3-216ENST00000484134 CWF19L2Q2TBE0 894 aaKnown RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms