RNA–Protein interactions for RNA: ENST00000484101.5

UFD1-208, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 751 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-208ENST00000484101 BCL9O00512 1426 aa11.79□□□□□ -0.52
UFD1-208ENST00000484101 APBB1O00213 710 aa11.79□□□□□ -0.52
UFD1-208ENST00000484101 IGKV5-2P06315 115 aa11.79□□□□□ -0.52
UFD1-208ENST00000484101 MYL6BP14649 208 aa11.79□□□□□ -0.52
UFD1-208ENST00000484101 AIMP1Q12904 312 aaKnown RBP11.79□□□□□ -0.52
UFD1-208ENST00000484101 OS9Q13438 667 aaPredicted RBP11.79□□□□□ -0.52
UFD1-208ENST00000484101 RABEP1Q15276 862 aa11.79□□□□□ -0.52
UFD1-208ENST00000484101 COL13A1Q5TAT6 717 aaPredicted RBP11.79□□□□□ -0.52
UFD1-208ENST00000484101 DDX54Q8TDD1 881 aaKnown RBP11.79□□□□□ -0.52
UFD1-208ENST00000484101 SGIP1Q9BQI5 828 aa11.79□□□□□ -0.52
UFD1-208ENST00000484101 USP16Q9Y5T5 823 aa11.79□□□□□ -0.52
UFD1-208ENST00000484101 GLRX3O76003 335 aaKnown RBP11.78□□□□□ -0.52
UFD1-208ENST00000484101 STARD3NLO95772 234 aa11.78□□□□□ -0.52
UFD1-208ENST00000484101 MCCP23508 829 aa11.78□□□□□ -0.52
UFD1-208ENST00000484101 CWF19L2Q2TBE0 894 aaKnown RBP11.78□□□□□ -0.52
UFD1-208ENST00000484101 C16orf71Q8IYS4 520 aaPredicted RBP11.78□□□□□ -0.52
UFD1-208ENST00000484101 MYD88Q99836 296 aa11.78□□□□□ -0.52
UFD1-208ENST00000484101 TBC1D2Q9BYX2 928 aa11.78□□□□□ -0.52
UFD1-208ENST00000484101 RGPD3A6NKT7 1758 aaPredicted RBP11.77□□□□□ -0.52
UFD1-208ENST00000484101 RGPD4Q7Z3J3 1758 aa11.77□□□□□ -0.52
UFD1-208ENST00000484101 EXOC5O00471 708 aa11.77□□□□□ -0.53
UFD1-208ENST00000484101 G3BP1Q13283 466 aaKnown RBP eCLIP11.77□□□□□ -0.53
UFD1-208ENST00000484101 GPR162Q16538 588 aa11.77□□□□□ -0.53
UFD1-208ENST00000484101 RABL6Q3YEC7 729 aaPredicted RBP11.77□□□□□ -0.53
UFD1-208ENST00000484101 CNTROBQ8N137 903 aa11.77□□□□□ -0.53
UFD1-208ENST00000484101 OTUD7AQ8TE49 926 aaPredicted RBP11.77□□□□□ -0.53
UFD1-208ENST00000484101 SUCLG2Q96I99 432 aa11.77□□□□□ -0.53
UFD1-208ENST00000484101 SPATA31A1Q5TZJ5 1347 aa11.77□□□□□ -0.53
UFD1-208ENST00000484101 ANAPC15P60006 121 aa11.76□□□□□ -0.53
UFD1-208ENST00000484101 BARGINQ6ZT62 677 aa11.76□□□□□ -0.53
UFD1-208ENST00000484101 TICAM2Q86XR7 235 aa11.76□□□□□ -0.53
UFD1-208ENST00000484101 CCDC191Q8NCU4 936 aa11.76□□□□□ -0.53
UFD1-208ENST00000484101 BICC1Q9H694 974 aaKnown RBP11.76□□□□□ -0.53
UFD1-208ENST00000484101 CWC25Q9NXE8 425 aaPredicted RBP11.76□□□□□ -0.53
UFD1-208ENST00000484101 HIP1O00291 1037 aa11.75□□□□□ -0.53
UFD1-208ENST00000484101 IFIT2P09913 472 aaKnown RBP11.75□□□□□ -0.53
UFD1-208ENST00000484101 TRIM28Q13263 835 aaKnown RBP11.75□□□□□ -0.53
UFD1-208ENST00000484101 HSP90AB3PQ58FF7 597 aa11.75□□□□□ -0.53
UFD1-208ENST00000484101 KIF6Q6ZMV9 814 aa11.75□□□□□ -0.53
UFD1-208ENST00000484101 USP26Q9BXU7 913 aa11.75□□□□□ -0.53
UFD1-208ENST00000484101 COPRSQ9NQ92 184 aa11.75□□□□□ -0.53
UFD1-208ENST00000484101 PCDH10Q9P2E7 1040 aa11.75□□□□□ -0.53
UFD1-208ENST00000484101 CIZ1Q9ULV3 898 aaPredicted RBP11.75□□□□□ -0.53
UFD1-208ENST00000484101 RFX7Q2KHR2 1363 aa11.75□□□□□ -0.53
UFD1-208ENST00000484101 TRIM6-TRIM34B2RNG4 842 aa11.74□□□□□ -0.53
UFD1-208ENST00000484101 MCM2P49736 904 aa11.74□□□□□ -0.53
UFD1-208ENST00000484101 RUFY2Q8WXA3 655 aa11.74□□□□□ -0.53
UFD1-208ENST00000484101 IL17RAQ96F46 866 aa11.74□□□□□ -0.53
UFD1-208ENST00000484101 ESYT1Q9BSJ8 1104 aa11.74□□□□□ -0.53
UFD1-208ENST00000484101 ATG3Q9NT62 314 aa11.74□□□□□ -0.53
UFD1-208ENST00000484101 ECHDC1Q9NTX5 307 aa11.74□□□□□ -0.53
UFD1-208ENST00000484101 FBXO3Q9UK99 471 aa11.74□□□□□ -0.53
UFD1-208ENST00000484101 SPEF2Q9C093 1822 aa11.74□□□□□ -0.53
UFD1-208ENST00000484101 MYH3P11055 1940 aa11.74□□□□□ -0.53
UFD1-208ENST00000484101 A0A087WZG4 1122 aa11.73□□□□□ -0.53
UFD1-208ENST00000484101 NBPF26B4DH59 902 aa11.73□□□□□ -0.53
UFD1-208ENST00000484101 H7C1W4 665 aa11.73□□□□□ -0.53
UFD1-208ENST00000484101 PLSCR1O15162 318 aa11.73□□□□□ -0.53
UFD1-208ENST00000484101 ST18O60284 1047 aa11.73□□□□□ -0.53
UFD1-208ENST00000484101 NBPF10Q6P3W6 841 aaKnown RBP11.73□□□□□ -0.53
UFD1-208ENST00000484101 NBPF15Q8N660 670 aa11.73□□□□□ -0.53
UFD1-208ENST00000484101 PI4K2BQ8TCG2 481 aa11.73□□□□□ -0.53
UFD1-208ENST00000484101 PIGBQ92521 554 aa11.73□□□□□ -0.53
UFD1-208ENST00000484101 RAD50Q92878 1312 aa11.73□□□□□ -0.53
UFD1-208ENST00000484101 KAZALD1Q96I82 304 aa11.73□□□□□ -0.53
UFD1-208ENST00000484101 ARXQ96QS3 562 aa11.73□□□□□ -0.53
UFD1-208ENST00000484101 MTFR1LQ9H019 292 aa11.73□□□□□ -0.53
UFD1-208ENST00000484101 IL1RAPL2Q9NP60 686 aa11.73□□□□□ -0.53
UFD1-208ENST00000484101 K7ELQ4 463 aaPredicted RBP11.72□□□□□ -0.53
UFD1-208ENST00000484101 CHMLP26374 656 aa11.72□□□□□ -0.53
UFD1-208ENST00000484101 CASP7P55210 303 aa11.72□□□□□ -0.53
UFD1-208ENST00000484101 DDB1Q16531 1140 aa11.72□□□□□ -0.53
UFD1-208ENST00000484101 UBE3BQ7Z3V4 1068 aa11.72□□□□□ -0.53
UFD1-208ENST00000484101 DNAJC5GQ8N7S2 189 aa11.72□□□□□ -0.53
UFD1-208ENST00000484101 EVI5LQ96CN4 794 aa11.72□□□□□ -0.53
UFD1-208ENST00000484101 KIF2CQ99661 725 aa11.72□□□□□ -0.53
UFD1-208ENST00000484101 ANTXR1Q9H6X2 564 aa11.72□□□□□ -0.53
UFD1-208ENST00000484101 CHMP5Q9NZZ3 219 aa11.72□□□□□ -0.53
UFD1-208ENST00000484101 PTCD1O75127 700 aaKnown RBP11.71□□□□□ -0.53
UFD1-208ENST00000484101 SLC4A3P48751 1232 aa11.71□□□□□ -0.53
UFD1-208ENST00000484101 TNS4Q8IZW8 715 aa11.71□□□□□ -0.53
UFD1-208ENST00000484101 PROM2Q8N271 834 aa11.71□□□□□ -0.53
UFD1-208ENST00000484101 RILPL2Q969X0 211 aa11.71□□□□□ -0.53
UFD1-208ENST00000484101 ISCA1Q9BUE6 129 aa11.71□□□□□ -0.53
UFD1-208ENST00000484101 GPR108Q9NPR9 543 aa11.71□□□□□ -0.53
UFD1-208ENST00000484101 NUP98P52948 1817 aa11.7□□□□□ -0.54
UFD1-208ENST00000484101 MAP3K15Q6ZN16 1313 aa11.7□□□□□ -0.54
UFD1-208ENST00000484101 CDHR2Q9BYE9 1310 aa11.7□□□□□ -0.54
UFD1-208ENST00000484101 COL5A3P25940 1745 aaPredicted RBP11.7□□□□□ -0.54
UFD1-208ENST00000484101 A1BGP04217 495 aa11.7□□□□□ -0.54
UFD1-208ENST00000484101 TCIRG1Q13488 830 aa11.7□□□□□ -0.54
UFD1-208ENST00000484101 AACSQ86V21 672 aa11.7□□□□□ -0.54
UFD1-208ENST00000484101 NUTM1Q86Y26 1132 aa11.7□□□□□ -0.54
UFD1-208ENST00000484101 SMARCC1Q92922 1105 aaPredicted RBP11.7□□□□□ -0.54
UFD1-208ENST00000484101 PLA2G12BQ9BX93 195 aa11.7□□□□□ -0.54
UFD1-208ENST00000484101 BCL11BQ9C0K0 894 aaPredicted RBP11.7□□□□□ -0.54
UFD1-208ENST00000484101 GOLGB1Q14789 3259 aaKnown RBP11.7□□□□□ -0.54
UFD1-208ENST00000484101 LAMB2P55268 1798 aa11.69□□□□□ -0.54
UFD1-208ENST00000484101 ERVV-1B6SEH8 477 aa11.69□□□□□ -0.54
UFD1-208ENST00000484101 RGL2O15211 777 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms