RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 WDR63Q8IWG1 891 aa8.92□□□□□ -0.98
BRCA1-216ENST00000484087 NLGN1Q8N2Q7 840 aa8.92□□□□□ -0.98
BRCA1-216ENST00000484087 CFAP44Q96MT7 982 aa8.92□□□□□ -0.98
BRCA1-216ENST00000484087 PARP3Q9Y6F1 533 aa8.92□□□□□ -0.98
BRCA1-216ENST00000484087 FAM177BA6PVY3 158 aa8.91□□□□□ -0.98
BRCA1-216ENST00000484087 MAP3K13O43283 966 aa8.91□□□□□ -0.98
BRCA1-216ENST00000484087 GIGYF1O75420 1035 aaPredicted RBP8.91□□□□□ -0.98
BRCA1-216ENST00000484087 CAMTA2O94983 1202 aa8.91□□□□□ -0.98
BRCA1-216ENST00000484087 DPEP1P16444 411 aa8.91□□□□□ -0.98
BRCA1-216ENST00000484087 EIF2S2P20042 333 aaKnown RBP8.91□□□□□ -0.98
BRCA1-216ENST00000484087 YY1P25490 414 aa8.91□□□□□ -0.98
BRCA1-216ENST00000484087 DUSP27Q5VZP5 1158 aa8.91□□□□□ -0.98
BRCA1-216ENST00000484087 DZIP3Q86Y13 1208 aaKnown RBP8.91□□□□□ -0.98
BRCA1-216ENST00000484087 WWC1Q8IX03 1113 aa8.91□□□□□ -0.98
BRCA1-216ENST00000484087 ANKRD36CQ5JPF3 1778 aa8.9□□□□□ -0.98
BRCA1-216ENST00000484087 TM4SF1P30408 202 aa8.9□□□□□ -0.98
BRCA1-216ENST00000484087 IL6STP40189 918 aaPredicted RBP8.9□□□□□ -0.98
BRCA1-216ENST00000484087 HLFQ16534 295 aa8.9□□□□□ -0.98
BRCA1-216ENST00000484087 TTLL7Q6ZT98 887 aa8.9□□□□□ -0.98
BRCA1-216ENST00000484087 CD2APQ9Y5K6 639 aa8.9□□□□□ -0.98
BRCA1-216ENST00000484087 ARFGEF1Q9Y6D6 1849 aa8.9□□□□□ -0.98
BRCA1-216ENST00000484087 SERPINB2P05120 415 aa8.89□□□□□ -0.99
BRCA1-216ENST00000484087 RASEFQ8IZ41 740 aa8.89□□□□□ -0.99
BRCA1-216ENST00000484087 TRMT2AQ8IZ69 625 aaKnown RBP8.89□□□□□ -0.99
BRCA1-216ENST00000484087 MYH16Q9H6N6 1097 aa8.89□□□□□ -0.99
BRCA1-216ENST00000484087 ELL2O00472 640 aaPredicted RBP8.89□□□□□ -0.99
BRCA1-216ENST00000484087 KCNA3P22001 575 aa8.89□□□□□ -0.99
BRCA1-216ENST00000484087 HMGB2P26583 209 aaKnown RBP8.89□□□□□ -0.99
BRCA1-216ENST00000484087 LMOD3Q0VAK6 560 aa8.89□□□□□ -0.99
BRCA1-216ENST00000484087 SLC51AQ86UW1 340 aa8.89□□□□□ -0.99
BRCA1-216ENST00000484087 TSR2Q969E8 191 aaKnown RBP8.89□□□□□ -0.99
BRCA1-216ENST00000484087 TEX13AQ9BXU3 409 aaPredicted RBP8.89□□□□□ -0.99
BRCA1-216ENST00000484087 ZBTB3Q9H5J0 574 aa8.89□□□□□ -0.99
BRCA1-216ENST00000484087 MBIPQ9NS73 344 aa8.89□□□□□ -0.99
BRCA1-216ENST00000484087 BCS1LQ9Y276 419 aa8.89□□□□□ -0.99
BRCA1-216ENST00000484087 ARFGEF2Q9Y6D5 1785 aa8.89□□□□□ -0.99
BRCA1-216ENST00000484087 CHL1O00533 1208 aa8.88□□□□□ -0.99
BRCA1-216ENST00000484087 CALD1Q05682 793 aaKnown RBP8.88□□□□□ -0.99
BRCA1-216ENST00000484087 PDIA6Q15084 440 aa8.88□□□□□ -0.99
BRCA1-216ENST00000484087 PRR5LQ6MZQ0 368 aa8.88□□□□□ -0.99
BRCA1-216ENST00000484087 CCDC136Q96JN2 1154 aa8.88□□□□□ -0.99
BRCA1-216ENST00000484087 CCDC88AQ3V6T2 1871 aa8.88□□□□□ -0.99
BRCA1-216ENST00000484087 LAMB2P55268 1798 aa8.87□□□□□ -0.99
BRCA1-216ENST00000484087 A0A087WZG4 1122 aa8.87□□□□□ -0.99
BRCA1-216ENST00000484087 TCERG1O14776 1098 aaKnown RBP8.87□□□□□ -0.99
BRCA1-216ENST00000484087 GPTP24298 496 aa8.87□□□□□ -0.99
BRCA1-216ENST00000484087 AIMP1Q12904 312 aaKnown RBP8.87□□□□□ -0.99
BRCA1-216ENST00000484087 LRP10Q7Z4F1 713 aa8.87□□□□□ -0.99
BRCA1-216ENST00000484087 CHPF2Q9P2E5 772 aa8.87□□□□□ -0.99
BRCA1-216ENST00000484087 SLX4Q8IY92 1834 aa8.87□□□□□ -0.99
BRCA1-216ENST00000484087 ABCC12Q96J65 1359 aa8.87□□□□□ -0.99
BRCA1-216ENST00000484087 NPM2Q86SE8 214 aaKnown RBP8.86□□□□□ -0.99
BRCA1-216ENST00000484087 SPRYD3Q8NCJ5 442 aa8.86□□□□□ -0.99
BRCA1-216ENST00000484087 IL16Q14005 1332 aa8.86□□□□□ -0.99
BRCA1-216ENST00000484087 UBN2Q6ZU65 1347 aa8.86□□□□□ -0.99
BRCA1-216ENST00000484087 TAF1P21675 1872 aa8.86□□□□□ -0.99
BRCA1-216ENST00000484087 SBF1O95248 1867 aa8.85□□□□□ -0.99
BRCA1-216ENST00000484087 TTLL13PA6NNM8 815 aa8.85□□□□□ -0.99
BRCA1-216ENST00000484087 RGL2O15211 777 aa8.85□□□□□ -0.99
BRCA1-216ENST00000484087 CT47B1P0C2W7 299 aaPredicted RBP8.85□□□□□ -0.99
BRCA1-216ENST00000484087 ZNF853P0CG23 659 aa8.85□□□□□ -0.99
BRCA1-216ENST00000484087 RASSF7Q02833 373 aa8.85□□□□□ -0.99
BRCA1-216ENST00000484087 B4GALNT3Q6L9W6 998 aa8.85□□□□□ -0.99
BRCA1-216ENST00000484087 NUTM1Q86Y26 1132 aa8.85□□□□□ -0.99
BRCA1-216ENST00000484087 TSPYL6Q8N831 410 aa8.85□□□□□ -0.99
BRCA1-216ENST00000484087 C8orf58Q8NAV2 365 aa8.85□□□□□ -0.99
BRCA1-216ENST00000484087 ZNF526Q8TF50 670 aaPredicted RBP8.85□□□□□ -0.99
BRCA1-216ENST00000484087 NIP7Q9Y221 180 aaKnown RBP eCLIP8.85□□□□□ -0.99
BRCA1-216ENST00000484087 TIAM2Q8IVF5 1701 aa8.85□□□□□ -0.99
BRCA1-216ENST00000484087 COL4A1P02462 1669 aa8.84□□□□□ -0.99
BRCA1-216ENST00000484087 NPHP1O15259 732 aa8.84□□□□□ -0.99
BRCA1-216ENST00000484087 TGFB2P61812 414 aa8.84□□□□□ -0.99
BRCA1-216ENST00000484087 HDGFL1Q5TGJ6 251 aa8.84□□□□□ -0.99
BRCA1-216ENST00000484087 C2CD5Q86YS7 1000 aa8.84□□□□□ -0.99
BRCA1-216ENST00000484087 CNBD1Q8NA66 436 aa8.84□□□□□ -0.99
BRCA1-216ENST00000484087 ZNF784Q8NCA9 323 aaPredicted RBP8.84□□□□□ -0.99
BRCA1-216ENST00000484087 XAGE3Q8WTP9 111 aa8.84□□□□□ -0.99
BRCA1-216ENST00000484087 SETDB2Q96T68 719 aa8.84□□□□□ -0.99
BRCA1-216ENST00000484087 DDX60Q8IY21 1712 aaKnown RBP8.84□□□□□ -0.99
BRCA1-216ENST00000484087 MAP3K15Q6ZN16 1313 aa8.84□□□□□ -0.99
BRCA1-216ENST00000484087 KIF6Q6ZMV9 814 aa8.83□□□□□ -1
BRCA1-216ENST00000484087 COPS6Q7L5N1 327 aa8.83□□□□□ -1
BRCA1-216ENST00000484087 NBPF5PQ86XG9 351 aaPredicted RBP8.83□□□□□ -1
BRCA1-216ENST00000484087 IFT57Q9NWB7 429 aa8.83□□□□□ -1
BRCA1-216ENST00000484087 COLQQ9Y215 455 aaPredicted RBP8.83□□□□□ -1
BRCA1-216ENST00000484087 ATP10DQ9P241 1426 aa8.83□□□□□ -1
BRCA1-216ENST00000484087 PLIN1O60240 522 aa8.83□□□□□ -1
BRCA1-216ENST00000484087 PRELPP51888 382 aa8.83□□□□□ -1
BRCA1-216ENST00000484087 TPRNQ4KMQ1 711 aa8.83□□□□□ -1
BRCA1-216ENST00000484087 SUSD4Q5VX71 490 aa8.83□□□□□ -1
BRCA1-216ENST00000484087 OLFM4Q6UX06 510 aa8.83□□□□□ -1
BRCA1-216ENST00000484087 ARHGAP27Q6ZUM4 889 aa8.83□□□□□ -1
BRCA1-216ENST00000484087 C3orf67Q6ZVT6 689 aa8.83□□□□□ -1
BRCA1-216ENST00000484087 SYNE4Q8N205 404 aa8.83□□□□□ -1
BRCA1-216ENST00000484087 ZNF622Q969S3 477 aaKnown RBP eCLIP8.83□□□□□ -1
BRCA1-216ENST00000484087 PHAXQ9H814 394 aaKnown RBP8.83□□□□□ -1
BRCA1-216ENST00000484087 PIM2Q9P1W9 311 aa8.83□□□□□ -1
BRCA1-216ENST00000484087 ZBTB47Q9UFB7 747 aaPredicted RBP8.83□□□□□ -1
BRCA1-216ENST00000484087 FER1L6Q2WGJ9 1857 aa8.82□□□□□ -1
BRCA1-216ENST00000484087 ADCY9O60503 1353 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms