RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 NBPF15Q8N660 670 aa17.56■□□□□ 0.4
SMAD9-204ENST00000483941 LINS1Q8NG48 757 aa17.56■□□□□ 0.4
SMAD9-204ENST00000483941 KLRG1Q96E93 195 aa17.56■□□□□ 0.4
SMAD9-204ENST00000483941 ZBTB40Q9NUA8 1239 aa17.56■□□□□ 0.4
SMAD9-204ENST00000483941 CNTNAP4Q9C0A0 1308 aa17.55■□□□□ 0.4
SMAD9-204ENST00000483941 HSP90AB3PQ58FF7 597 aa17.55■□□□□ 0.4
SMAD9-204ENST00000483941 METTL22Q9BUU2 404 aaPredicted RBP17.55■□□□□ 0.4
SMAD9-204ENST00000483941 CRKLP46109 303 aaKnown RBP17.54■□□□□ 0.4
SMAD9-204ENST00000483941 COL13A1Q5TAT6 717 aaPredicted RBP17.54■□□□□ 0.4
SMAD9-204ENST00000483941 ERVV-1B6SEH8 477 aa17.53■□□□□ 0.4
SMAD9-204ENST00000483941 RGL2O15211 777 aa17.53■□□□□ 0.4
SMAD9-204ENST00000483941 HTRA3P83110 453 aa17.53■□□□□ 0.4
SMAD9-204ENST00000483941 BEND3Q5T5X7 828 aa17.53■□□□□ 0.4
SMAD9-204ENST00000483941 JMYQ8N9B5 988 aa17.53■□□□□ 0.4
SMAD9-204ENST00000483941 RWDD1Q9H446 243 aaPredicted RBP17.53■□□□□ 0.4
SMAD9-204ENST00000483941 SBF1O95248 1867 aa17.52■□□□□ 0.4
SMAD9-204ENST00000483941 DPEP1P16444 411 aa17.52■□□□□ 0.4
SMAD9-204ENST00000483941 EIF5P55010 431 aaKnown RBP17.52■□□□□ 0.4
SMAD9-204ENST00000483941 FSTL1Q12841 308 aa17.52■□□□□ 0.4
SMAD9-204ENST00000483941 C9orf131Q5VYM1 1079 aa17.52■□□□□ 0.4
SMAD9-204ENST00000483941 INTS5Q6P9B9 1019 aaKnown RBP17.52■□□□□ 0.4
SMAD9-204ENST00000483941 NLGN1Q8N2Q7 840 aa17.52■□□□□ 0.4
SMAD9-204ENST00000483941 ZBTB1Q9Y2K1 713 aa17.52■□□□□ 0.4
SMAD9-204ENST00000483941 RTCBQ9Y3I0 505 aaKnown RBP17.52■□□□□ 0.4
SMAD9-204ENST00000483941 ZNF330Q9Y3S2 320 aaPredicted RBP17.52■□□□□ 0.4
SMAD9-204ENST00000483941 CAPN15O75808 1086 aa17.51■□□□□ 0.39
SMAD9-204ENST00000483941 GNAI2P04899 355 aa17.51■□□□□ 0.39
SMAD9-204ENST00000483941 TRAPPC3LQ5T215 181 aa17.51■□□□□ 0.39
SMAD9-204ENST00000483941 MYH14Q7Z406 1995 aaKnown RBP17.51■□□□□ 0.39
SMAD9-204ENST00000483941 MAP3K15Q6ZN16 1313 aa17.5■□□□□ 0.39
SMAD9-204ENST00000483941 ADRA2BP18089 450 aa17.5■□□□□ 0.39
SMAD9-204ENST00000483941 PIP4K2AP48426 406 aaPredicted RBP17.5■□□□□ 0.39
SMAD9-204ENST00000483941 RPAP2Q8IXW5 612 aaPredicted RBP17.5■□□□□ 0.39
SMAD9-204ENST00000483941 C9orf78Q9NZ63 289 aaPredicted RBP17.5■□□□□ 0.39
SMAD9-204ENST00000483941 ZNF652Q9Y2D9 606 aa17.5■□□□□ 0.39
SMAD9-204ENST00000483941 PARP3Q9Y6F1 533 aa17.5■□□□□ 0.39
SMAD9-204ENST00000483941 KDM2BQ8NHM5 1336 aa17.49■□□□□ 0.39
SMAD9-204ENST00000483941 RPS6KA4O75676 772 aa17.49■□□□□ 0.39
SMAD9-204ENST00000483941 UBTFL1P0CB47 393 aaPredicted RBP17.49■□□□□ 0.39
SMAD9-204ENST00000483941 B4GALNT3Q6L9W6 998 aa17.49■□□□□ 0.39
SMAD9-204ENST00000483941 CENPQQ7L2Z9 268 aaPredicted RBP17.49■□□□□ 0.39
SMAD9-204ENST00000483941 DZIP3Q86Y13 1208 aaKnown RBP17.49■□□□□ 0.39
SMAD9-204ENST00000483941 MYD88Q99836 296 aa17.49■□□□□ 0.39
SMAD9-204ENST00000483941 TJP1Q07157 1748 aa17.49■□□□□ 0.39
SMAD9-204ENST00000483941 HMMRO75330 724 aa17.48■□□□□ 0.39
SMAD9-204ENST00000483941 GYS1P13807 737 aa17.48■□□□□ 0.39
SMAD9-204ENST00000483941 TRIM28Q13263 835 aaKnown RBP17.48■□□□□ 0.39
SMAD9-204ENST00000483941 TCIRG1Q13488 830 aa17.48■□□□□ 0.39
SMAD9-204ENST00000483941 TTLL7Q6ZT98 887 aa17.48■□□□□ 0.39
SMAD9-204ENST00000483941 TNS4Q8IZW8 715 aa17.48■□□□□ 0.39
SMAD9-204ENST00000483941 CCDC191Q8NCU4 936 aa17.48■□□□□ 0.39
SMAD9-204ENST00000483941 RFC4P35249 363 aa17.47■□□□□ 0.39
SMAD9-204ENST00000483941 HDAC1Q13547 482 aaPredicted RBP17.47■□□□□ 0.39
SMAD9-204ENST00000483941 GIGYF2Q6Y7W6 1299 aaKnown RBP17.47■□□□□ 0.39
SMAD9-204ENST00000483941 ARHGEF1Q92888 912 aaKnown RBP17.47■□□□□ 0.39
SMAD9-204ENST00000483941 USP44Q9H0E7 712 aa17.47■□□□□ 0.39
SMAD9-204ENST00000483941 ZBTB3Q9H5J0 574 aa17.47■□□□□ 0.39
SMAD9-204ENST00000483941 NEURL1BA8MQ27 555 aa17.46■□□□□ 0.39
SMAD9-204ENST00000483941 GRM8O00222 908 aa17.46■□□□□ 0.39
SMAD9-204ENST00000483941 CLEC4GQ6UXB4 293 aa17.46■□□□□ 0.39
SMAD9-204ENST00000483941 MEIS3Q99687 375 aa17.46■□□□□ 0.39
SMAD9-204ENST00000483941 CWC25Q9NXE8 425 aaPredicted RBP17.46■□□□□ 0.39
SMAD9-204ENST00000483941 RNF181Q9P0P0 153 aa17.46■□□□□ 0.39
SMAD9-204ENST00000483941 PIM2Q9P1W9 311 aa17.46■□□□□ 0.39
SMAD9-204ENST00000483941 TIAM2Q8IVF5 1701 aa17.46■□□□□ 0.39
SMAD9-204ENST00000483941 COL15A1P39059 1388 aa17.45■□□□□ 0.38
SMAD9-204ENST00000483941 KCNA3P22001 575 aa17.45■□□□□ 0.38
SMAD9-204ENST00000483941 GCKRQ14397 625 aa17.45■□□□□ 0.38
SMAD9-204ENST00000483941 DALRD3Q5D0E6 543 aaKnown RBP17.45■□□□□ 0.38
SMAD9-204ENST00000483941 UTYO14607 1347 aa17.45■□□□□ 0.38
SMAD9-204ENST00000483941 HSP90B1P14625 803 aaKnown RBP17.44■□□□□ 0.38
SMAD9-204ENST00000483941 PRELPP51888 382 aa17.44■□□□□ 0.38
SMAD9-204ENST00000483941 PCDHB15Q9Y5E8 787 aa17.44■□□□□ 0.38
SMAD9-204ENST00000483941 DLEC1Q9Y238 1755 aa17.43■□□□□ 0.38
SMAD9-204ENST00000483941 ZPR1O75312 459 aa17.43■□□□□ 0.38
SMAD9-204ENST00000483941 IGKV5-2P06315 115 aa17.43■□□□□ 0.38
SMAD9-204ENST00000483941 CWF19L2Q2TBE0 894 aaKnown RBP17.43■□□□□ 0.38
SMAD9-204ENST00000483941 ANKRD44Q8N8A2 993 aa17.43■□□□□ 0.38
SMAD9-204ENST00000483941 SMC1BQ8NDV3 1235 aa17.43■□□□□ 0.38
SMAD9-204ENST00000483941 ISCA1Q9BUE6 129 aa17.43■□□□□ 0.38
SMAD9-204ENST00000483941 RRAGCQ9HB90 399 aa17.43■□□□□ 0.38
SMAD9-204ENST00000483941 TBC1D2BQ9UPU7 963 aa17.43■□□□□ 0.38
SMAD9-204ENST00000483941 PARP10Q53GL7 1025 aa17.42■□□□□ 0.38
SMAD9-204ENST00000483941 GCC1Q96CN9 775 aa17.42■□□□□ 0.38
SMAD9-204ENST00000483941 NARFQ9UHQ1 456 aa17.42■□□□□ 0.38
SMAD9-204ENST00000483941 AFDNP55196 1824 aaKnown RBP17.4■□□□□ 0.38
SMAD9-204ENST00000483941 CCDC88AQ3V6T2 1871 aa17.4■□□□□ 0.38
SMAD9-204ENST00000483941 ATP5J2-PTCD1G3V325 749 aa17.4■□□□□ 0.38
SMAD9-204ENST00000483941 CAMTA2O94983 1202 aa17.4■□□□□ 0.38
SMAD9-204ENST00000483941 ATP8B2P98198 1209 aa17.4■□□□□ 0.38
SMAD9-204ENST00000483941 CEP85Q6P2H3 762 aa17.4■□□□□ 0.38
SMAD9-204ENST00000483941 ZC3H4Q9UPT8 1303 aaKnown RBP17.4■□□□□ 0.38
SMAD9-204ENST00000483941 H7C1W4 665 aa17.39■□□□□ 0.37
SMAD9-204ENST00000483941 NBPF7P0C2Y1 421 aaPredicted RBP17.39■□□□□ 0.37
SMAD9-204ENST00000483941 DDR1Q08345 913 aa17.39■□□□□ 0.37
SMAD9-204ENST00000483941 PPP1R42Q7Z4L9 355 aa17.39■□□□□ 0.37
SMAD9-204ENST00000483941 ZBTB38Q8NAP3 1195 aaPredicted RBP17.39■□□□□ 0.37
SMAD9-204ENST00000483941 C1orf115Q9H7X2 142 aa17.39■□□□□ 0.37
SMAD9-204ENST00000483941 ZBTB47Q9UFB7 747 aaPredicted RBP17.39■□□□□ 0.37
SMAD9-204ENST00000483941 SRP68Q9UHB9 627 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms