RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 SGIP1Q9BQI5 828 aa19.39■□□□□ 0.69
CCM2-215ENST00000482714 ATF5Q9Y2D1 282 aaPredicted RBP19.39■□□□□ 0.69
CCM2-215ENST00000482714 UBN2Q6ZU65 1347 aa19.38■□□□□ 0.69
CCM2-215ENST00000482714 RRP1P56182 461 aaKnown RBP19.38■□□□□ 0.69
CCM2-215ENST00000482714 SLC10A5Q5PT55 438 aa19.38■□□□□ 0.69
CCM2-215ENST00000482714 MSL1Q68DK7 614 aa19.38■□□□□ 0.69
CCM2-215ENST00000482714 NBPF5PQ86XG9 351 aaPredicted RBP19.38■□□□□ 0.69
CCM2-215ENST00000482714 ZBTB38Q8NAP3 1195 aaPredicted RBP19.38■□□□□ 0.69
CCM2-215ENST00000482714 CHMP4BQ9H444 224 aaKnown RBP19.38■□□□□ 0.69
CCM2-215ENST00000482714 H7C1W4 665 aa19.37■□□□□ 0.69
CCM2-215ENST00000482714 GTF2E1P29083 439 aaPredicted RBP19.37■□□□□ 0.69
CCM2-215ENST00000482714 DDR1Q08345 913 aa19.37■□□□□ 0.69
CCM2-215ENST00000482714 TRMT112Q9UI30 125 aaKnown RBP19.37■□□□□ 0.69
CCM2-215ENST00000482714 PCCAP05165 728 aaPredicted RBP19.36■□□□□ 0.69
CCM2-215ENST00000482714 PTGER2P43116 358 aa19.36■□□□□ 0.69
CCM2-215ENST00000482714 CWF19L2Q2TBE0 894 aaKnown RBP19.36■□□□□ 0.69
CCM2-215ENST00000482714 CLUAP1Q96AJ1 413 aa19.36■□□□□ 0.69
CCM2-215ENST00000482714 SUPT16HQ9Y5B9 1047 aaKnown RBP19.36■□□□□ 0.69
CCM2-215ENST00000482714 LRP5O75197 1615 aa19.36■□□□□ 0.69
CCM2-215ENST00000482714 SH3TC1Q8TE82 1336 aa19.36■□□□□ 0.69
CCM2-215ENST00000482714 CNBD1Q8NA66 436 aa19.35■□□□□ 0.69
CCM2-215ENST00000482714 C9orf78Q9NZ63 289 aaPredicted RBP19.35■□□□□ 0.69
CCM2-215ENST00000482714 PDZRN3Q9UPQ7 1066 aa19.35■□□□□ 0.69
CCM2-215ENST00000482714 ARFGEF2Q9Y6D5 1785 aa19.35■□□□□ 0.69
CCM2-215ENST00000482714 COL24A1Q17RW2 1714 aa19.35■□□□□ 0.69
CCM2-215ENST00000482714 UTYO14607 1347 aa19.35■□□□□ 0.69
CCM2-215ENST00000482714 GRM8O00222 908 aa19.35■□□□□ 0.69
CCM2-215ENST00000482714 PLIN1O60240 522 aa19.35■□□□□ 0.69
CCM2-215ENST00000482714 NTSR2O95665 410 aa19.35■□□□□ 0.69
CCM2-215ENST00000482714 NPHP1O15259 732 aa19.34■□□□□ 0.69
CCM2-215ENST00000482714 ST5P78524 1137 aa19.34■□□□□ 0.69
CCM2-215ENST00000482714 PRR5LQ6MZQ0 368 aa19.34■□□□□ 0.69
CCM2-215ENST00000482714 TMEM57Q8N5G2 664 aa19.34■□□□□ 0.69
CCM2-215ENST00000482714 BRIP1Q9BX63 1249 aa19.34■□□□□ 0.69
CCM2-215ENST00000482714 USP44Q9H0E7 712 aa19.34■□□□□ 0.69
CCM2-215ENST00000482714 CDHR2Q9BYE9 1310 aa19.33■□□□□ 0.69
CCM2-215ENST00000482714 GNAI3P08754 354 aa19.32■□□□□ 0.68
CCM2-215ENST00000482714 FAM89AQ96GI7 184 aa19.32■□□□□ 0.68
CCM2-215ENST00000482714 DDX19BQ9UMR2 479 aa19.32■□□□□ 0.68
CCM2-215ENST00000482714 ANKRD36CQ5JPF3 1778 aa19.32■□□□□ 0.68
CCM2-215ENST00000482714 ZBTB7BO15156 539 aaPredicted RBP19.31■□□□□ 0.68
CCM2-215ENST00000482714 RLBP1P12271 317 aa19.31■□□□□ 0.68
CCM2-215ENST00000482714 MVPQ14764 893 aaKnown RBP19.31■□□□□ 0.68
CCM2-215ENST00000482714 PANK1Q8TE04 598 aa19.31■□□□□ 0.68
CCM2-215ENST00000482714 NLRP3Q96P20 1036 aa19.31■□□□□ 0.68
CCM2-215ENST00000482714 PLA2G12BQ9BX93 195 aa19.31■□□□□ 0.68
CCM2-215ENST00000482714 TNNQ9UQP3 1299 aa19.31■□□□□ 0.68
CCM2-215ENST00000482714 CD2APQ9Y5K6 639 aa19.31■□□□□ 0.68
CCM2-215ENST00000482714 KLRG2A4D1S0 409 aaPredicted RBP19.3■□□□□ 0.68
CCM2-215ENST00000482714 FAM177BA6PVY3 158 aa19.3■□□□□ 0.68
CCM2-215ENST00000482714 IRS4O14654 1257 aaPredicted RBP19.3■□□□□ 0.68
CCM2-215ENST00000482714 PDE6BP35913 854 aa19.3■□□□□ 0.68
CCM2-215ENST00000482714 CASP7P55210 303 aa19.3■□□□□ 0.68
CCM2-215ENST00000482714 ERFEQ4G0M1 354 aa19.3■□□□□ 0.68
CCM2-215ENST00000482714 PDE8AO60658 829 aa19.29■□□□□ 0.68
CCM2-215ENST00000482714 TGFB2P61812 414 aa19.29■□□□□ 0.68
CCM2-215ENST00000482714 AAMPQ13685 434 aa19.29■□□□□ 0.68
CCM2-215ENST00000482714 ITPRIPQ8IWB1 547 aa19.29■□□□□ 0.68
CCM2-215ENST00000482714 RIC1Q4ADV7 1423 aa19.29■□□□□ 0.68
CCM2-215ENST00000482714 NBPF7P0C2Y1 421 aaPredicted RBP19.28■□□□□ 0.68
CCM2-215ENST00000482714 UBE3BQ7Z3V4 1068 aa19.28■□□□□ 0.68
CCM2-215ENST00000482714 NUTM1Q86Y26 1132 aa19.28■□□□□ 0.68
CCM2-215ENST00000482714 UBTFL1P0CB47 393 aaPredicted RBP19.28■□□□□ 0.68
CCM2-215ENST00000482714 SF3B3Q15393 1217 aaKnown RBP19.28■□□□□ 0.68
CCM2-215ENST00000482714 COG6Q9Y2V7 657 aa19.28■□□□□ 0.68
CCM2-215ENST00000482714 NRXN2Q9P2S2 1712 aa19.28■□□□□ 0.68
CCM2-215ENST00000482714 C20orf194Q5TEA3 1177 aa19.26■□□□□ 0.67
CCM2-215ENST00000482714 GNAI2P04899 355 aa19.25■□□□□ 0.67
CCM2-215ENST00000482714 CSF1RP07333 972 aa19.25■□□□□ 0.67
CCM2-215ENST00000482714 CRY2Q49AN0 593 aa19.25■□□□□ 0.67
CCM2-215ENST00000482714 RTL5Q5HYW3 569 aaPredicted RBP19.25■□□□□ 0.67
CCM2-215ENST00000482714 SYNE4Q8N205 404 aa19.25■□□□□ 0.67
CCM2-215ENST00000482714 PPP1R1BQ9UD71 204 aaPredicted RBP19.25■□□□□ 0.67
CCM2-215ENST00000482714 H0YIN7 160 aa19.24■□□□□ 0.67
CCM2-215ENST00000482714 HCLS1P14317 486 aaPredicted RBP19.24■□□□□ 0.67
CCM2-215ENST00000482714 MEIS3Q99687 375 aa19.24■□□□□ 0.67
CCM2-215ENST00000482714 AFDNP55196 1824 aaKnown RBP19.23■□□□□ 0.67
CCM2-215ENST00000482714 HOXA10P31260 410 aaPredicted RBP19.23■□□□□ 0.67
CCM2-215ENST00000482714 ZBTB40Q9NUA8 1239 aa19.23■□□□□ 0.67
CCM2-215ENST00000482714 C10orf71Q711Q0 1435 aa19.23■□□□□ 0.67
CCM2-215ENST00000482714 FOXO4P98177 505 aa19.22■□□□□ 0.67
CCM2-215ENST00000482714 RABL6Q3YEC7 729 aaPredicted RBP19.22■□□□□ 0.67
CCM2-215ENST00000482714 CCDC152Q4G0S7 254 aa19.22■□□□□ 0.67
CCM2-215ENST00000482714 TTLL11Q8NHH1 800 aa19.22■□□□□ 0.67
CCM2-215ENST00000482714 JARID2Q92833 1246 aaPredicted RBP19.22■□□□□ 0.67
CCM2-215ENST00000482714 N4BP2Q86UW6 1770 aaPredicted RBP19.22■□□□□ 0.67
CCM2-215ENST00000482714 SRGNP10124 158 aa19.22■□□□□ 0.67
CCM2-215ENST00000482714 NPR1P16066 1061 aa19.22■□□□□ 0.67
CCM2-215ENST00000482714 ALDH1B1P30837 517 aa19.22■□□□□ 0.67
CCM2-215ENST00000482714 MASTLQ96GX5 879 aa19.22■□□□□ 0.67
CCM2-215ENST00000482714 KAZALD1Q96I82 304 aa19.22■□□□□ 0.67
CCM2-215ENST00000482714 ABCC12Q96J65 1359 aa19.21■□□□□ 0.67
CCM2-215ENST00000482714 CTSWP56202 376 aa19.21■□□□□ 0.67
CCM2-215ENST00000482714 STYK1Q6J9G0 422 aa19.21■□□□□ 0.67
CCM2-215ENST00000482714 CCDC24Q8N4L8 307 aa19.21■□□□□ 0.67
CCM2-215ENST00000482714 SUCLG2Q96I99 432 aa19.21■□□□□ 0.67
CCM2-215ENST00000482714 CRAMP1Q96RY5 1269 aa19.21■□□□□ 0.67
CCM2-215ENST00000482714 C2CD5Q86YS7 1000 aa19.2■□□□□ 0.66
CCM2-215ENST00000482714 RBM17Q96I25 401 aaKnown RBP19.2■□□□□ 0.66
CCM2-215ENST00000482714 RTL9Q8NET4 1388 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms