RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 DGKZQ13574 1117 aa7.39□□□□□ -1.23
GTF3A-207ENST00000482655 GRIN2CQ14957 1233 aa7.39□□□□□ -1.23
GTF3A-207ENST00000482655 CHSY3Q70JA7 882 aa7.39□□□□□ -1.23
GTF3A-207ENST00000482655 CCDC82Q8N4S0 544 aa7.39□□□□□ -1.23
GTF3A-207ENST00000482655 SLC30A3Q99726 388 aa7.39□□□□□ -1.23
GTF3A-207ENST00000482655 KLK14Q9P0G3 267 aa7.39□□□□□ -1.23
GTF3A-207ENST00000482655 SRPK2P78362 688 aaKnown RBP7.38□□□□□ -1.23
GTF3A-207ENST00000482655 FKBP5Q13451 457 aaPredicted RBP7.38□□□□□ -1.23
GTF3A-207ENST00000482655 RAB44Q7Z6P3 723 aaPredicted RBP7.38□□□□□ -1.23
GTF3A-207ENST00000482655 QTRT2Q9H974 415 aaKnown RBP7.38□□□□□ -1.23
GTF3A-207ENST00000482655 ELOA3CA0A087WX78 387 aaPredicted RBP7.37□□□□□ -1.23
GTF3A-207ENST00000482655 ELOA3DA6NLF2 546 aaPredicted RBP7.37□□□□□ -1.23
GTF3A-207ENST00000482655 ELOA3BQ3SY89 546 aa7.37□□□□□ -1.23
GTF3A-207ENST00000482655 TMEM164Q5U3C3 297 aa7.37□□□□□ -1.23
GTF3A-207ENST00000482655 KCTD17Q8N5Z5 321 aa7.37□□□□□ -1.23
GTF3A-207ENST00000482655 ELOA3Q8NG57 546 aa7.37□□□□□ -1.23
GTF3A-207ENST00000482655 BHMTQ93088 406 aa7.37□□□□□ -1.23
GTF3A-207ENST00000482655 MYO19Q96H55 970 aa7.37□□□□□ -1.23
GTF3A-207ENST00000482655 PNMA5Q96PV4 448 aa7.37□□□□□ -1.23
GTF3A-207ENST00000482655 GNB5O14775 395 aa7.36□□□□□ -1.23
GTF3A-207ENST00000482655 IDH3AP50213 366 aa7.36□□□□□ -1.23
GTF3A-207ENST00000482655 C11orf91Q3C1V1 193 aa7.36□□□□□ -1.23
GTF3A-207ENST00000482655 BCS1LQ9Y276 419 aa7.36□□□□□ -1.23
GTF3A-207ENST00000482655 ADARB2-AS1A8MUL3 147 aa7.35□□□□□ -1.23
GTF3A-207ENST00000482655 DGKGP49619 791 aa7.35□□□□□ -1.23
GTF3A-207ENST00000482655 ARSDP51689 593 aa7.35□□□□□ -1.23
GTF3A-207ENST00000482655 FAM69CQ0P6D2 419 aa7.35□□□□□ -1.23
GTF3A-207ENST00000482655 OCLNQ16625 522 aa7.35□□□□□ -1.23
GTF3A-207ENST00000482655 ERICH6Q7L0X2 663 aa7.35□□□□□ -1.23
GTF3A-207ENST00000482655 TNFRSF25Q93038 417 aa7.35□□□□□ -1.23
GTF3A-207ENST00000482655 MKNK1Q9BUB5 465 aa7.35□□□□□ -1.23
GTF3A-207ENST00000482655 EFCC1Q9HA90 598 aa7.35□□□□□ -1.23
GTF3A-207ENST00000482655 PTCD1O75127 700 aaKnown RBP7.34□□□□□ -1.23
GTF3A-207ENST00000482655 ADH7P40394 386 aa7.34□□□□□ -1.23
GTF3A-207ENST00000482655 TBC1D8BQ0IIM8 1120 aa7.34□□□□□ -1.23
GTF3A-207ENST00000482655 ALYREFQ86V81 257 aaKnown RBP7.34□□□□□ -1.23
GTF3A-207ENST00000482655 CLP1Q92989 425 aaKnown RBP7.34□□□□□ -1.23
GTF3A-207ENST00000482655 IFT43Q96FT9 208 aa7.34□□□□□ -1.23
GTF3A-207ENST00000482655 DCAF5Q96JK2 942 aa7.34□□□□□ -1.23
GTF3A-207ENST00000482655 UBE2OQ9C0C9 1292 aaKnown RBP7.34□□□□□ -1.23
GTF3A-207ENST00000482655 NOP53Q9NZM5 478 aaKnown RBP7.34□□□□□ -1.23
GTF3A-207ENST00000482655 CXXC1Q9P0U4 656 aaPredicted RBP7.34□□□□□ -1.23
GTF3A-207ENST00000482655 DMGDHQ9UI17 866 aaKnown RBP7.34□□□□□ -1.23
GTF3A-207ENST00000482655 MICAL2O94851 1124 aa7.33□□□□□ -1.24
GTF3A-207ENST00000482655 INPP5BP32019 993 aa7.33□□□□□ -1.24
GTF3A-207ENST00000482655 CCINQ13939 588 aa7.33□□□□□ -1.24
GTF3A-207ENST00000482655 GPAT2Q6NUI2 795 aa7.33□□□□□ -1.24
GTF3A-207ENST00000482655 C16orf46Q6P387 395 aa7.33□□□□□ -1.24
GTF3A-207ENST00000482655 LINC00114Q6XXX2 140 aa7.33□□□□□ -1.24
GTF3A-207ENST00000482655 IGFLR1Q9H665 355 aa7.33□□□□□ -1.24
GTF3A-207ENST00000482655 PPP1R15AO75807 674 aaPredicted RBP7.32□□□□□ -1.24
GTF3A-207ENST00000482655 HOXB4P17483 251 aaPredicted RBP7.32□□□□□ -1.24
GTF3A-207ENST00000482655 COX20Q5RI15 118 aa7.32□□□□□ -1.24
GTF3A-207ENST00000482655 COL26A1Q96A83 441 aa7.32□□□□□ -1.24
GTF3A-207ENST00000482655 GSX2Q9BZM3 304 aa7.32□□□□□ -1.24
GTF3A-207ENST00000482655 LRFN2Q9ULH4 789 aa7.32□□□□□ -1.24
GTF3A-207ENST00000482655 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.32□□□□□ -1.24
GTF3A-207ENST00000482655 NFKB1P19838 968 aa7.31□□□□□ -1.24
GTF3A-207ENST00000482655 ATP2B4P23634 1241 aa7.31□□□□□ -1.24
GTF3A-207ENST00000482655 TREML1Q86YW5 311 aa7.31□□□□□ -1.24
GTF3A-207ENST00000482655 MDFIQ99750 246 aa7.31□□□□□ -1.24
GTF3A-207ENST00000482655 C1orf115Q9H7X2 142 aa7.31□□□□□ -1.24
GTF3A-207ENST00000482655 SPDYE3A6NKU9 549 aa7.3□□□□□ -1.24
GTF3A-207ENST00000482655 M0R082 166 aa7.3□□□□□ -1.24
GTF3A-207ENST00000482655 IGHA1P01876 353 aa7.3□□□□□ -1.24
GTF3A-207ENST00000482655 BRD2P25440 801 aaKnown RBP7.3□□□□□ -1.24
GTF3A-207ENST00000482655 ZNF417Q8TAU3 575 aa7.3□□□□□ -1.24
GTF3A-207ENST00000482655 ZNF587Q96SQ5 575 aaPredicted RBP7.3□□□□□ -1.24
GTF3A-207ENST00000482655 SUV39H2Q9H5I1 410 aa7.3□□□□□ -1.24
GTF3A-207ENST00000482655 NAA30Q147X3 362 aaPredicted RBP7.29□□□□□ -1.24
GTF3A-207ENST00000482655 PLA2G4EQ3MJ16 856 aa7.29□□□□□ -1.24
GTF3A-207ENST00000482655 KRT25Q7Z3Z0 450 aa7.29□□□□□ -1.24
GTF3A-207ENST00000482655 RGL4Q8IZJ4 473 aa7.29□□□□□ -1.24
GTF3A-207ENST00000482655 SAP130Q9H0E3 1048 aa7.29□□□□□ -1.24
GTF3A-207ENST00000482655 C11orf16Q9NQ32 467 aa7.29□□□□□ -1.24
GTF3A-207ENST00000482655 SLC6A14Q9UN76 642 aa7.29□□□□□ -1.24
GTF3A-207ENST00000482655 RTCBQ9Y3I0 505 aaKnown RBP7.29□□□□□ -1.24
GTF3A-207ENST00000482655 ALBP02768 609 aa7.28□□□□□ -1.24
GTF3A-207ENST00000482655 RARAP10276 462 aa7.28□□□□□ -1.24
GTF3A-207ENST00000482655 COL8A1P27658 744 aa7.28□□□□□ -1.24
GTF3A-207ENST00000482655 ARID4AP29374 1257 aaPredicted RBP7.28□□□□□ -1.24
GTF3A-207ENST00000482655 PCSK7Q16549 785 aa7.28□□□□□ -1.24
GTF3A-207ENST00000482655 PLVAPQ9BX97 442 aa7.28□□□□□ -1.24
GTF3A-207ENST00000482655 FAM13BQ9NYF5 915 aa7.28□□□□□ -1.24
GTF3A-207ENST00000482655 XYLBO75191 536 aa7.27□□□□□ -1.25
GTF3A-207ENST00000482655 CMTR1Q8N1G2 835 aaKnown RBP7.27□□□□□ -1.25
GTF3A-207ENST00000482655 DNAJB12Q9NXW2 375 aaKnown RBP7.27□□□□□ -1.25
GTF3A-207ENST00000482655 USP20Q9Y2K6 914 aa7.27□□□□□ -1.25
GTF3A-207ENST00000482655 MSTNO14793 375 aa7.26□□□□□ -1.25
GTF3A-207ENST00000482655 OPLAHO14841 1288 aa7.26□□□□□ -1.25
GTF3A-207ENST00000482655 LILRB5O75023 590 aa7.26□□□□□ -1.25
GTF3A-207ENST00000482655 SASH3O75995 380 aa7.26□□□□□ -1.25
GTF3A-207ENST00000482655 MAP3K6O95382 1288 aa7.26□□□□□ -1.25
GTF3A-207ENST00000482655 GRNP28799 593 aaKnown RBP7.26□□□□□ -1.25
GTF3A-207ENST00000482655 PRRT3Q5FWE3 981 aa7.26□□□□□ -1.25
GTF3A-207ENST00000482655 CAPN12Q6ZSI9 719 aa7.26□□□□□ -1.25
GTF3A-207ENST00000482655 ETFBKMTQ8IXQ9 262 aa7.26□□□□□ -1.25
GTF3A-207ENST00000482655 MICALL1Q8N3F8 863 aa7.26□□□□□ -1.25
GTF3A-207ENST00000482655 ABTB2Q8N961 1025 aa7.26□□□□□ -1.25
GTF3A-207ENST00000482655 TRIM11Q96F44 468 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms