RNA–Protein interactions for RNA: ENST00000482614.5

EXOSC3-205, Transcript of exosome component 3, humanhuman

TSL 5

Gene EXOSC3, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-205ENST00000482614 HYPKQ9NX55 129 aa19.9■□□□□ 0.78
EXOSC3-205ENST00000482614 TCIRG1Q13488 830 aa19.89■□□□□ 0.77
EXOSC3-205ENST00000482614 NCBP3Q53F19 620 aaKnown RBP19.89■□□□□ 0.77
EXOSC3-205ENST00000482614 CCDC93Q567U6 631 aa19.89■□□□□ 0.77
EXOSC3-205ENST00000482614 TNRC6CQ9HCJ0 1690 aaKnown RBP19.89■□□□□ 0.77
EXOSC3-205ENST00000482614 DICER1Q9UPY3 1922 aaKnown RBP19.88■□□□□ 0.77
EXOSC3-205ENST00000482614 RNF123Q5XPI4 1314 aa19.88■□□□□ 0.77
EXOSC3-205ENST00000482614 ANKRD13DQ6ZTN6 518 aa19.88■□□□□ 0.77
EXOSC3-205ENST00000482614 PLBD2Q8NHP8 589 aa19.88■□□□□ 0.77
EXOSC3-205ENST00000482614 RPGRQ92834 1020 aaKnown RBP19.88■□□□□ 0.77
EXOSC3-205ENST00000482614 CHMP4AQ9BY43 222 aa19.88■□□□□ 0.77
EXOSC3-205ENST00000482614 TOMM70O94826 608 aa19.87■□□□□ 0.77
EXOSC3-205ENST00000482614 SLC10A5Q5PT55 438 aa19.87■□□□□ 0.77
EXOSC3-205ENST00000482614 NLRP10Q86W26 655 aa19.87■□□□□ 0.77
EXOSC3-205ENST00000482614 WWC1Q8IX03 1113 aa19.87■□□□□ 0.77
EXOSC3-205ENST00000482614 NLRP3Q96P20 1036 aa19.87■□□□□ 0.77
EXOSC3-205ENST00000482614 TIAM2Q8IVF5 1701 aa19.87■□□□□ 0.77
EXOSC3-205ENST00000482614 GLTPD2A6NH11 291 aa19.86■□□□□ 0.77
EXOSC3-205ENST00000482614 ELL2O00472 640 aaPredicted RBP19.86■□□□□ 0.77
EXOSC3-205ENST00000482614 HOXA10P31260 410 aaPredicted RBP19.86■□□□□ 0.77
EXOSC3-205ENST00000482614 C16orf71Q8IYS4 520 aaPredicted RBP19.86■□□□□ 0.77
EXOSC3-205ENST00000482614 RTKN2Q8IZC4 609 aa19.86■□□□□ 0.77
EXOSC3-205ENST00000482614 RBM17Q96I25 401 aaKnown RBP19.86■□□□□ 0.77
EXOSC3-205ENST00000482614 RRAGCQ9HB90 399 aa19.86■□□□□ 0.77
EXOSC3-205ENST00000482614 DPY19L2Q6NUT2 758 aa19.85■□□□□ 0.77
EXOSC3-205ENST00000482614 C8orf58Q8NAV2 365 aa19.85■□□□□ 0.77
EXOSC3-205ENST00000482614 CRAMP1Q96RY5 1269 aa19.85■□□□□ 0.77
EXOSC3-205ENST00000482614 FKBP4Q02790 459 aaKnown RBP eCLIP19.84■□□□□ 0.77
EXOSC3-205ENST00000482614 CC2D2BQ6DHV5 1058 aa19.84■□□□□ 0.77
EXOSC3-205ENST00000482614 TRMT112Q9UI30 125 aaKnown RBP19.84■□□□□ 0.77
EXOSC3-205ENST00000482614 IL16Q14005 1332 aa19.83■□□□□ 0.77
EXOSC3-205ENST00000482614 CCDC30Q5VVM6 783 aa19.83■□□□□ 0.77
EXOSC3-205ENST00000482614 HSPA6P17066 643 aa19.82■□□□□ 0.76
EXOSC3-205ENST00000482614 ISCA1Q9BUE6 129 aa19.82■□□□□ 0.76
EXOSC3-205ENST00000482614 SH3TC1Q8TE82 1336 aa19.81■□□□□ 0.76
EXOSC3-205ENST00000482614 GOLGA2Q08379 1002 aa19.81■□□□□ 0.76
EXOSC3-205ENST00000482614 GRIPAP1Q4V328 841 aa19.81■□□□□ 0.76
EXOSC3-205ENST00000482614 OLFM4Q6UX06 510 aa19.81■□□□□ 0.76
EXOSC3-205ENST00000482614 C3orf67Q6ZVT6 689 aa19.81■□□□□ 0.76
EXOSC3-205ENST00000482614 RIC3Q7Z5B4 369 aa19.81■□□□□ 0.76
EXOSC3-205ENST00000482614 RBM46Q8TBY0 533 aaKnown RBP19.81■□□□□ 0.76
EXOSC3-205ENST00000482614 TSR2Q969E8 191 aaKnown RBP19.81■□□□□ 0.76
EXOSC3-205ENST00000482614 VEGFAP15692 232 aaPredicted RBP19.8■□□□□ 0.76
EXOSC3-205ENST00000482614 PHAXQ9H814 394 aaKnown RBP19.8■□□□□ 0.76
EXOSC3-205ENST00000482614 ATP5J2-PTCD1G3V325 749 aa19.79■□□□□ 0.76
EXOSC3-205ENST00000482614 PPEF1O14829 653 aaPredicted RBP19.79■□□□□ 0.76
EXOSC3-205ENST00000482614 HCLS1P14317 486 aaPredicted RBP19.79■□□□□ 0.76
EXOSC3-205ENST00000482614 TRIM28Q13263 835 aaKnown RBP19.79■□□□□ 0.76
EXOSC3-205ENST00000482614 WDR63Q8IWG1 891 aa19.79■□□□□ 0.76
EXOSC3-205ENST00000482614 FAM9BQ8IZU0 186 aa19.79■□□□□ 0.76
EXOSC3-205ENST00000482614 SYNE4Q8N205 404 aa19.79■□□□□ 0.76
EXOSC3-205ENST00000482614 TSPYL6Q8N831 410 aa19.79■□□□□ 0.76
EXOSC3-205ENST00000482614 PSMD1Q99460 953 aa19.79■□□□□ 0.76
EXOSC3-205ENST00000482614 LAMB2P55268 1798 aa19.78■□□□□ 0.76
EXOSC3-205ENST00000482614 TMX4Q9H1E5 349 aaPredicted RBP19.78■□□□□ 0.76
EXOSC3-205ENST00000482614 ZNF277Q9NRM2 450 aaPredicted RBP19.78■□□□□ 0.76
EXOSC3-205ENST00000482614 SALL2Q9Y467 1007 aaPredicted RBP19.78■□□□□ 0.76
EXOSC3-205ENST00000482614 WDR90Q96KV7 1748 aa19.77■□□□□ 0.76
EXOSC3-205ENST00000482614 DDX58O95786 925 aaKnown RBP19.77■□□□□ 0.76
EXOSC3-205ENST00000482614 IARSP41252 1262 aaKnown RBP19.77■□□□□ 0.76
EXOSC3-205ENST00000482614 FSTL1Q12841 308 aa19.77■□□□□ 0.76
EXOSC3-205ENST00000482614 TWISTNBQ3B726 338 aaPredicted RBP19.77■□□□□ 0.76
EXOSC3-205ENST00000482614 SNED1Q8TER0 1413 aa19.76■□□□□ 0.75
EXOSC3-205ENST00000482614 BBOX1O75936 387 aa19.76■□□□□ 0.75
EXOSC3-205ENST00000482614 DDX46Q7L014 1031 aaKnown RBP19.76■□□□□ 0.75
EXOSC3-205ENST00000482614 STK31Q9BXU1 1019 aa19.76■□□□□ 0.75
EXOSC3-205ENST00000482614 ABCC4O15439 1325 aa19.76■□□□□ 0.75
EXOSC3-205ENST00000482614 TCERG1O14776 1098 aaKnown RBP19.75■□□□□ 0.75
EXOSC3-205ENST00000482614 FAM89AQ96GI7 184 aa19.75■□□□□ 0.75
EXOSC3-205ENST00000482614 ATP6V0A2Q9Y487 856 aa19.75■□□□□ 0.75
EXOSC3-205ENST00000482614 POTECB2RU33 542 aa19.74■□□□□ 0.75
EXOSC3-205ENST00000482614 DDNO94850 711 aaPredicted RBP19.74■□□□□ 0.75
EXOSC3-205ENST00000482614 ZNF428Q96B54 188 aa19.74■□□□□ 0.75
EXOSC3-205ENST00000482614 MYD88Q99836 296 aa19.74■□□□□ 0.75
EXOSC3-205ENST00000482614 DDX60Q8IY21 1712 aaKnown RBP19.73■□□□□ 0.75
EXOSC3-205ENST00000482614 SP8Q8IXZ3 490 aa19.73■□□□□ 0.75
EXOSC3-205ENST00000482614 CCDC191Q8NCU4 936 aa19.73■□□□□ 0.75
EXOSC3-205ENST00000482614 SMC1BQ8NDV3 1235 aa19.73■□□□□ 0.75
EXOSC3-205ENST00000482614 JDP2Q8WYK2 163 aa19.73■□□□□ 0.75
EXOSC3-205ENST00000482614 METTL22Q9BUU2 404 aaPredicted RBP19.73■□□□□ 0.75
EXOSC3-205ENST00000482614 FANCIQ9NVI1 1328 aa19.73■□□□□ 0.75
EXOSC3-205ENST00000482614 IRS4O14654 1257 aaPredicted RBP19.72■□□□□ 0.75
EXOSC3-205ENST00000482614 HSP90B1P14625 803 aaKnown RBP19.72■□□□□ 0.75
EXOSC3-205ENST00000482614 APLP1P51693 650 aa19.72■□□□□ 0.75
EXOSC3-205ENST00000482614 GRAPQ13588 217 aa19.72■□□□□ 0.75
EXOSC3-205ENST00000482614 SF3B3Q15393 1217 aaKnown RBP19.72■□□□□ 0.75
EXOSC3-205ENST00000482614 ZBTB38Q8NAP3 1195 aaPredicted RBP19.72■□□□□ 0.75
EXOSC3-205ENST00000482614 GRAPLQ8TC17 118 aaPredicted RBP19.72■□□□□ 0.75
EXOSC3-205ENST00000482614 FZD9O00144 591 aa19.71■□□□□ 0.75
EXOSC3-205ENST00000482614 RTL5Q5HYW3 569 aaPredicted RBP19.71■□□□□ 0.75
EXOSC3-205ENST00000482614 KSR2Q6VAB6 950 aa19.71■□□□□ 0.75
EXOSC3-205ENST00000482614 TMC4Q7Z404 712 aa19.71■□□□□ 0.75
EXOSC3-205ENST00000482614 MAP3K2Q9Y2U5 619 aa19.71■□□□□ 0.75
EXOSC3-205ENST00000482614 SLC4A2P04920 1241 aa19.7■□□□□ 0.74
EXOSC3-205ENST00000482614 SUPT20HQ8NEM7 779 aa19.7■□□□□ 0.74
EXOSC3-205ENST00000482614 VPS33BQ9H267 617 aa19.7■□□□□ 0.74
EXOSC3-205ENST00000482614 CWC25Q9NXE8 425 aaPredicted RBP19.7■□□□□ 0.74
EXOSC3-205ENST00000482614 PI4KAP2A4QPH2 592 aa19.69■□□□□ 0.74
EXOSC3-205ENST00000482614 IQCA1LA6NCM1 817 aa19.69■□□□□ 0.74
EXOSC3-205ENST00000482614 PCCAP05165 728 aaPredicted RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms