RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 CREB3L3Q68CJ9 461 aa10.85□□□□□ -0.67
CALD1-220ENST00000482470 NFXL1Q6ZNB6 911 aa10.85□□□□□ -0.67
CALD1-220ENST00000482470 CHST3Q7LGC8 479 aa10.85□□□□□ -0.67
CALD1-220ENST00000482470 CADPS2Q86UW7 1296 aa10.85□□□□□ -0.67
CALD1-220ENST00000482470 BABAM1Q9NWV8 329 aa10.85□□□□□ -0.67
CALD1-220ENST00000482470 CCDC39Q9UFE4 941 aa10.85□□□□□ -0.67
CALD1-220ENST00000482470 ZNF830Q96NB3 372 aaPredicted RBP10.85□□□□□ -0.67
CALD1-220ENST00000482470 OSBPL3Q9H4L5 887 aa10.85□□□□□ -0.67
CALD1-220ENST00000482470 TMEM63CQ9P1W3 806 aa10.85□□□□□ -0.67
CALD1-220ENST00000482470 SIGLEC1Q9BZZ2 1709 aa10.85□□□□□ -0.67
CALD1-220ENST00000482470 CRB1P82279 1406 aa10.85□□□□□ -0.67
CALD1-220ENST00000482470 HSP90AB3PQ58FF7 597 aa10.85□□□□□ -0.67
CALD1-220ENST00000482470 DBNDD2Q9BQY9 259 aa10.85□□□□□ -0.67
CALD1-220ENST00000482470 TLR7Q9NYK1 1049 aaKnown RBP10.85□□□□□ -0.67
CALD1-220ENST00000482470 TTC41PQ6P2S7 1318 aa10.84□□□□□ -0.67
CALD1-220ENST00000482470 MAP2P11137 1827 aaKnown RBP10.84□□□□□ -0.67
CALD1-220ENST00000482470 GOLGA6L6A8MZA4 724 aa10.84□□□□□ -0.67
CALD1-220ENST00000482470 IDH1O75874 414 aaKnown RBP10.84□□□□□ -0.67
CALD1-220ENST00000482470 HSPA4P34932 840 aa10.84□□□□□ -0.67
CALD1-220ENST00000482470 LRRFIP1Q32MZ4 808 aaKnown RBP10.84□□□□□ -0.67
CALD1-220ENST00000482470 RRP12Q5JTH9 1297 aaKnown RBP10.84□□□□□ -0.67
CALD1-220ENST00000482470 LRSAM1Q6UWE0 723 aa10.84□□□□□ -0.67
CALD1-220ENST00000482470 BRF1Q92994 677 aa10.84□□□□□ -0.67
CALD1-220ENST00000482470 SDF4Q9BRK5 362 aa10.84□□□□□ -0.67
CALD1-220ENST00000482470 TNMDQ9H2S6 317 aa10.84□□□□□ -0.67
CALD1-220ENST00000482470 TMOD3Q9NYL9 352 aa10.84□□□□□ -0.67
CALD1-220ENST00000482470 ATP2B1P20020 1258 aa10.84□□□□□ -0.67
CALD1-220ENST00000482470 ZCRB1Q8TBF4 217 aaKnown RBP10.84□□□□□ -0.67
CALD1-220ENST00000482470 ZNF594Q96JF6 807 aaPredicted RBP10.84□□□□□ -0.67
CALD1-220ENST00000482470 TRIM5Q9C035 493 aa10.84□□□□□ -0.67
CALD1-220ENST00000482470 SLC52A2Q9HAB3 445 aa10.84□□□□□ -0.67
CALD1-220ENST00000482470 SH2B1Q9NRF2 756 aaPredicted RBP10.84□□□□□ -0.67
CALD1-220ENST00000482470 PTPRUQ92729 1446 aa10.84□□□□□ -0.67
CALD1-220ENST00000482470 RAD50Q92878 1312 aa10.84□□□□□ -0.67
CALD1-220ENST00000482470 HOXB7P09629 217 aa10.84□□□□□ -0.67
CALD1-220ENST00000482470 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.84□□□□□ -0.67
CALD1-220ENST00000482470 CWC25Q9NXE8 425 aaPredicted RBP10.84□□□□□ -0.67
CALD1-220ENST00000482470 GCKRQ14397 625 aa10.83□□□□□ -0.68
CALD1-220ENST00000482470 ADCK5Q3MIX3 580 aa10.83□□□□□ -0.68
CALD1-220ENST00000482470 CCDC73Q6ZRK6 1079 aa10.83□□□□□ -0.68
CALD1-220ENST00000482470 CCDC171Q6TFL3 1326 aa10.83□□□□□ -0.68
CALD1-220ENST00000482470 SHPRHQ149N8 1683 aa10.83□□□□□ -0.68
CALD1-220ENST00000482470 FSD2A1L4K1 749 aa10.83□□□□□ -0.68
CALD1-220ENST00000482470 METTL24Q5JXM2 366 aa10.83□□□□□ -0.68
CALD1-220ENST00000482470 GPT2Q8TD30 523 aa10.83□□□□□ -0.68
CALD1-220ENST00000482470 ZNF592Q92610 1267 aa10.83□□□□□ -0.68
CALD1-220ENST00000482470 NEK1Q96PY6 1258 aa10.83□□□□□ -0.68
CALD1-220ENST00000482470 NPHP3Q7Z494 1330 aa10.83□□□□□ -0.68
CALD1-220ENST00000482470 ME1P48163 572 aa10.83□□□□□ -0.68
CALD1-220ENST00000482470 CCDC183Q5T5S1 534 aa10.83□□□□□ -0.68
CALD1-220ENST00000482470 NSFL1CQ9UNZ2 370 aaKnown RBP10.83□□□□□ -0.68
CALD1-220ENST00000482470 OVOS2A0A0J9YW53 1432 aa10.82□□□□□ -0.68
CALD1-220ENST00000482470 NUTM2BA6NNL0 878 aaPredicted RBP10.82□□□□□ -0.68
CALD1-220ENST00000482470 NUTM2EB1AL46 878 aaPredicted RBP10.82□□□□□ -0.68
CALD1-220ENST00000482470 F13A1P00488 732 aa10.82□□□□□ -0.68
CALD1-220ENST00000482470 CCDC192P0DO97 292 aa10.82□□□□□ -0.68
CALD1-220ENST00000482470 OVOS2Q6IE36 1432 aa10.82□□□□□ -0.68
CALD1-220ENST00000482470 NUTM2AQ8IVF1 878 aaPredicted RBP10.82□□□□□ -0.68
CALD1-220ENST00000482470 INTS4Q96HW7 963 aaKnown RBP10.82□□□□□ -0.68
CALD1-220ENST00000482470 DCAF5Q96JK2 942 aa10.82□□□□□ -0.68
CALD1-220ENST00000482470 NUP62CLQ9H1M0 184 aa10.82□□□□□ -0.68
CALD1-220ENST00000482470 STAP2Q9UGK3 403 aa10.82□□□□□ -0.68
CALD1-220ENST00000482470 MYO5BQ9ULV0 1848 aa10.82□□□□□ -0.68
CALD1-220ENST00000482470 KRT32Q14532 448 aa10.82□□□□□ -0.68
CALD1-220ENST00000482470 SEC62Q99442 399 aaKnown RBP10.82□□□□□ -0.68
CALD1-220ENST00000482470 METTL22Q9BUU2 404 aaPredicted RBP10.82□□□□□ -0.68
CALD1-220ENST00000482470 CLCN1P35523 988 aa10.82□□□□□ -0.68
CALD1-220ENST00000482470 SYNE3Q6ZMZ3 975 aa10.82□□□□□ -0.68
CALD1-220ENST00000482470 IL25Q9H293 177 aa10.82□□□□□ -0.68
CALD1-220ENST00000482470 USP31Q70CQ4 1352 aa10.82□□□□□ -0.68
CALD1-220ENST00000482470 A0A0D9SFI3 127 aa10.81□□□□□ -0.68
CALD1-220ENST00000482470 NEURL1BA8MQ27 555 aa10.81□□□□□ -0.68
CALD1-220ENST00000482470 BRD1O95696 1058 aa10.81□□□□□ -0.68
CALD1-220ENST00000482470 CHMP4CQ96CF2 233 aa10.81□□□□□ -0.68
CALD1-220ENST00000482470 ATP10DQ9P241 1426 aa10.81□□□□□ -0.68
CALD1-220ENST00000482470 CREBRFQ8IUR6 639 aa10.81□□□□□ -0.68
CALD1-220ENST00000482470 IFIT5Q13325 482 aaKnown RBP10.81□□□□□ -0.68
CALD1-220ENST00000482470 CPLX2Q6PUV4 134 aaKnown RBP10.81□□□□□ -0.68
CALD1-220ENST00000482470 Q6ZUG5 572 aa10.81□□□□□ -0.68
CALD1-220ENST00000482470 RUFY3Q7L099 469 aa10.81□□□□□ -0.68
CALD1-220ENST00000482470 FAM89AQ96GI7 184 aa10.81□□□□□ -0.68
CALD1-220ENST00000482470 DLC1Q96QB1 1528 aa10.81□□□□□ -0.68
CALD1-220ENST00000482470 CDC42BPGQ6DT37 1551 aa10.81□□□□□ -0.68
CALD1-220ENST00000482470 LETM1O95202 739 aaPredicted RBP10.8□□□□□ -0.68
CALD1-220ENST00000482470 ADAMTS2O95450 1211 aa10.8□□□□□ -0.68
CALD1-220ENST00000482470 PHKG2P15735 406 aa10.8□□□□□ -0.68
CALD1-220ENST00000482470 UBE2HP62256 183 aa10.8□□□□□ -0.68
CALD1-220ENST00000482470 LDHAL6AQ6ZMR3 332 aa10.8□□□□□ -0.68
CALD1-220ENST00000482470 VPS37DQ86XT2 251 aa10.8□□□□□ -0.68
CALD1-220ENST00000482470 PI4K2BQ8TCG2 481 aa10.8□□□□□ -0.68
CALD1-220ENST00000482470 SLC27A2O14975 620 aa10.8□□□□□ -0.68
CALD1-220ENST00000482470 TTLL7Q6ZT98 887 aa10.8□□□□□ -0.68
CALD1-220ENST00000482470 CCDC82Q8N4S0 544 aa10.8□□□□□ -0.68
CALD1-220ENST00000482470 TRMT112Q9UI30 125 aaKnown RBP10.8□□□□□ -0.68
CALD1-220ENST00000482470 KINO60870 393 aaKnown RBP10.8□□□□□ -0.68
CALD1-220ENST00000482470 STARD3NLO95772 234 aa10.8□□□□□ -0.68
CALD1-220ENST00000482470 MAP3K11Q16584 847 aa10.8□□□□□ -0.68
CALD1-220ENST00000482470 LSG1Q9H089 658 aaKnown RBP10.8□□□□□ -0.68
CALD1-220ENST00000482470 RRP9O43818 475 aaKnown RBP10.79□□□□□ -0.68
CALD1-220ENST00000482470 ADCY5O95622 1261 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms